FFCP PHASE1:Hg19::chr6:31763673..31763686,-: Difference between revisions
From FANTOM5_SSTAR
(Created page with "{{FFCP
|id=chr6:31763673..31763686,-
|short_description=p6@VARS
|description=CAGE_peak_6_at_VARS_5end
|association_with_transcript=25bp_to_NM_006295,uc003nxe.2,uc011doi.1_...") |
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(10 intermediate revisions by the same user not shown) | |||
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=7407 | |EntrezGene=7407 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=12651 | |HGNC=12651 | ||
|TSSclassifier=strong | |||
|UniProt=P26640 | |UniProt=P26640 | ||
|association_with_transcript=25bp_to_NM_006295,uc003nxe.2,uc011doi.1_5end | |||
|cluster_id=chr6:31763673..31763686,- | |||
|description=CAGE_peak_6_at_VARS_5end | |||
|id=chr6:31763673..31763686,- | |||
|ontology_enrichment_celltype=CL:0000066!2.29e-14!254;CL:0002321!8.61e-11!248;CL:0000220!3.00e-10!246 | |||
|ontology_enrichment_celltype_v019=CL:1000449;2.14e-07;15 | |||
|ontology_enrichment_celltype_v019_2=CL:0000066,2.63e-10,253;CL:0002321,1.01e-08,250;CL:1000449,7.34e-08,15;CL:1000507,6.62e-07,10;CL:1000494,6.62e-07,10 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease=DOID:162!4.43e-08!235;DOID:14566!3.30e-07!239 | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0003104!3.35e-09!238;UBERON:0009142!3.35e-09!238;UBERON:0000481!1.11e-08!347;UBERON:0000475!4.29e-07!365 | |||
|ontology_enrichment_uberon_v019=UBERON:0001737;1.11e-08;9!UBERON:0001557;1.11e-08;9!UBERON:0006555;2.14e-07;15!UBERON:0004819;2.14e-07;15!UBERON:0001285;2.14e-07;15!UBERON:0007684;2.14e-07;15 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001737,5.65e-09,9;UBERON:0004211,7.34e-08,15;UBERON:0009773,7.34e-08,15;UBERON:0001231,7.34e-08,15;UBERON:0001285,7.34e-08,15;UBERON:0007684,7.34e-08,15;UBERON:0004208,7.34e-08,15;UBERON:0006555,3.64e-07,16;UBERON:0004819,3.64e-07,16;UBERON:0004810,6.62e-07,10 | |||
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| ||
|short_description=p6@VARS | |||
}} | }} |
Latest revision as of 00:04, 18 September 2015
Short description: | p6@VARS |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_6_at_VARS_5end |
Coexpression cluster: | NA |
Association with transcript: | 25bp_to_NM_006295, uc003nxe.2, uc011doi.1_5end |
EntrezGene: | VARS |
HGNC: | 12651 |
UniProt: | P26640 |
Genome view: | ZENBU |
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CAGE Expression
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Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
epithelial cell | 2.63e-10 | 253 |
embryonic cell | 1.01e-08 | 250 |
epithelial cell of nephron | 7.34e-08 | 15 |
kidney tubule cell | 6.62e-07 | 10 |
nephron tubule epithelial cell | 6.62e-07 | 10 |
Ontology term | p-value | n |
---|---|---|
larynx | 5.65e-09 | 9 |
nephron epithelium | 7.34e-08 | 15 |
renal tubule | 7.34e-08 | 15 |
nephron tubule | 7.34e-08 | 15 |
nephron | 7.34e-08 | 15 |
uriniferous tubule | 7.34e-08 | 15 |
nephrogenic mesenchyme | 7.34e-08 | 15 |
excretory tube | 3.64e-07 | 16 |
kidney epithelium | 3.64e-07 | 16 |
nephron tubule epithelium | 6.62e-07 | 10 |