FFCP PHASE1:Hg19::chr4:54930753..54930786,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=26511 | |EntrezGene=26511 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=1935 | |HGNC=1935 | ||
|TSSclassifier=strong | |||
|UniProt=Q9UKJ5 | |UniProt=Q9UKJ5 | ||
|association_with_transcript=1bp_to_uc003haj.1_5end | |association_with_transcript=1bp_to_uc003haj.1_5end | ||
|cluster_id=chr4:54930753..54930786,- | |||
|description=CAGE_peak_1_at_CHIC2_5end | |description=CAGE_peak_1_at_CHIC2_5end | ||
|id=chr4:54930753..54930786,- | |id=chr4:54930753..54930786,- | ||
|ontology_enrichment_celltype=CL:0002371!5.95e-27!591;CL:0000723!2.53e-25!436;CL:0000048!4.46e-25!430;CL:0000034!9.55e-24!444;CL:0000144!3.18e-23!625;CL:0002057!1.65e-21!42;CL:0002320!9.11e-20!365;CL:0000134!4.13e-19!358;CL:0000860!1.86e-17!45;CL:0000003!1.11e-15!722;CL:0000766!1.27e-13!76;CL:0000012!1.87e-13!682;CL:0000219!5.37e-13!390;CL:0000548!1.28e-12!679;CL:0000004!1.28e-12!679;CL:0000255!1.28e-12!679;CL:0002194!8.76e-11!63;CL:0000576!8.76e-11!63;CL:0000040!8.76e-11!63;CL:0000559!8.76e-11!63;CL:0002009!1.00e-10!65;CL:0000839!1.48e-10!70;CL:0000557!3.25e-10!71;CL:0000738!7.85e-10!140;CL:0000063!2.62e-09!578;CL:0002087!3.33e-08!119;CL:0002031!3.96e-08!124;CL:0000359!1.46e-07!32 | |ontology_enrichment_celltype=CL:0002371!5.95e-27!591;CL:0000723!2.53e-25!436;CL:0000048!4.46e-25!430;CL:0000034!9.55e-24!444;CL:0000144!3.18e-23!625;CL:0002057!1.65e-21!42;CL:0002320!9.11e-20!365;CL:0000134!4.13e-19!358;CL:0000860!1.86e-17!45;CL:0000003!1.11e-15!722;CL:0000766!1.27e-13!76;CL:0000012!1.87e-13!682;CL:0000219!5.37e-13!390;CL:0000548!1.28e-12!679;CL:0000004!1.28e-12!679;CL:0000255!1.28e-12!679;CL:0002194!8.76e-11!63;CL:0000576!8.76e-11!63;CL:0000040!8.76e-11!63;CL:0000559!8.76e-11!63;CL:0002009!1.00e-10!65;CL:0000839!1.48e-10!70;CL:0000557!3.25e-10!71;CL:0000738!7.85e-10!140;CL:0000063!2.62e-09!578;CL:0002087!3.33e-08!119;CL:0002031!3.96e-08!124;CL:0000359!1.46e-07!32 | ||
|ontology_enrichment_celltype_v019=CL:0000860;1.42e-18;33!CL:0002057;1.42e-18;33!CL:0000473;1.06e-11;39!CL:0000234;1.06e-11;39!CL:0000576;2.15e-11;48!CL:0000766;3.50e-08;69!CL:0000359;4.22e-07;32 | |||
|ontology_enrichment_celltype_v019_2=CL:0000723,1.85e-26,433;CL:0000048,3.28e-26,427;CL:0000034,7.76e-25,441;CL:0000860,1.65e-21,42;CL:0002057,1.65e-21,42;CL:0002320,4.90e-21,361;CL:0000134,2.30e-20,354;CL:0000473,6.67e-17,48;CL:0000234,6.67e-17,48;CL:0000766,1.26e-15,72;CL:0000219,5.64e-14,386;CL:0002194,1.03e-12,59;CL:0000576,1.03e-12,59;CL:0000040,1.03e-12,59;CL:0000559,1.03e-12,59;CL:0002009,1.32e-12,61;CL:0000839,2.54e-12,66;CL:0000557,6.38e-12,67;CL:0000738,6.60e-11,136;CL:0002087,2.99e-09,115;CL:0002031,3.83e-09,120;CL:0000359,1.46e-07,32 | |||
|ontology_enrichment_development_v019=CL:0002057;7.87e-16;42 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0003081!7.73e-25!216;UBERON:0004535!6.89e-19!110;UBERON:0002384!1.36e-18!375;UBERON:0001009!2.68e-17!113;UBERON:0002049!2.99e-14!79;UBERON:0007798!2.99e-14!79;UBERON:0002193!6.31e-14!112;UBERON:0004872!2.06e-13!84;UBERON:0000055!6.39e-13!69;UBERON:0002390!2.66e-12!102;UBERON:0003061!2.66e-12!102;UBERON:0002204!7.76e-12!167;UBERON:0001981!1.51e-11!60;UBERON:0007500!1.51e-11!60;UBERON:0004537!1.51e-11!60;UBERON:0006965!1.51e-11!60;UBERON:0001637!5.58e-11!42;UBERON:0003509!5.58e-11!42;UBERON:0004572!5.58e-11!42;UBERON:0002405!1.08e-09!115;UBERON:0004573!1.17e-09!33;UBERON:0004571!1.17e-09!33;UBERON:0002371!2.04e-09!80;UBERON:0001474!2.15e-09!86;UBERON:0004765!4.85e-09!101;UBERON:0001434!4.85e-09!101;UBERON:0003914!9.83e-07!118 | |ontology_enrichment_uberon=UBERON:0003081!7.73e-25!216;UBERON:0004535!6.89e-19!110;UBERON:0002384!1.36e-18!375;UBERON:0001009!2.68e-17!113;UBERON:0002049!2.99e-14!79;UBERON:0007798!2.99e-14!79;UBERON:0002193!6.31e-14!112;UBERON:0004872!2.06e-13!84;UBERON:0000055!6.39e-13!69;UBERON:0002390!2.66e-12!102;UBERON:0003061!2.66e-12!102;UBERON:0002204!7.76e-12!167;UBERON:0001981!1.51e-11!60;UBERON:0007500!1.51e-11!60;UBERON:0004537!1.51e-11!60;UBERON:0006965!1.51e-11!60;UBERON:0001637!5.58e-11!42;UBERON:0003509!5.58e-11!42;UBERON:0004572!5.58e-11!42;UBERON:0002405!1.08e-09!115;UBERON:0004573!1.17e-09!33;UBERON:0004571!1.17e-09!33;UBERON:0002371!2.04e-09!80;UBERON:0001474!2.15e-09!86;UBERON:0004765!4.85e-09!101;UBERON:0001434!4.85e-09!101;UBERON:0003914!9.83e-07!118 | ||
|ontology_enrichment_uberon_v019=UBERON:0004573;7.90e-09;33!UBERON:0004571;7.90e-09;33!UBERON:0001637;4.49e-08;42!UBERON:0003509;4.49e-08;42!UBERON:0004572;4.49e-08;42!UBERON:0007500;2.39e-07;56!UBERON:0001981;2.39e-07;56!UBERON:0004537;2.39e-07;56!UBERON:0000055;6.82e-07;65 | |||
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|short_description=p1@CHIC2 | |short_description=p1@CHIC2 | ||
}} | }} |
Latest revision as of 00:38, 18 September 2015
Short description: | p1@CHIC2 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_CHIC2_5end |
Coexpression cluster: | NA |
Association with transcript: | 1bp_to_uc003haj.1_5end |
EntrezGene: | CHIC2 |
HGNC: | 1935 |
UniProt: | Q9UKJ5 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
somatic stem cell | 1.85e-26 | 433 |
multi fate stem cell | 3.28e-26 | 427 |
stem cell | 7.76e-25 | 441 |
classical monocyte | 1.65e-21 | 42 |
CD14-positive, CD16-negative classical monocyte | 1.65e-21 | 42 |
connective tissue cell | 4.90e-21 | 361 |
mesenchymal cell | 2.30e-20 | 354 |
defensive cell | 6.67e-17 | 48 |
phagocyte | 6.67e-17 | 48 |
myeloid leukocyte | 1.26e-15 | 72 |
motile cell | 5.64e-14 | 386 |
monopoietic cell | 1.03e-12 | 59 |
monocyte | 1.03e-12 | 59 |
monoblast | 1.03e-12 | 59 |
promonocyte | 1.03e-12 | 59 |
macrophage dendritic cell progenitor | 1.32e-12 | 61 |
myeloid lineage restricted progenitor cell | 2.54e-12 | 66 |
granulocyte monocyte progenitor cell | 6.38e-12 | 67 |
leukocyte | 6.60e-11 | 136 |
nongranular leukocyte | 2.99e-09 | 115 |
hematopoietic lineage restricted progenitor cell | 3.83e-09 | 120 |
vascular associated smooth muscle cell | 1.46e-07 | 32 |
Ontology term | p-value | n |
---|---|---|
lateral plate mesoderm | 8.75e-29 | 203 |
connective tissue | 8.33e-20 | 371 |
mesoderm | 2.67e-19 | 315 |
mesoderm-derived structure | 2.67e-19 | 315 |
presumptive mesoderm | 2.67e-19 | 315 |
cardiovascular system | 1.71e-18 | 109 |
circulatory system | 6.45e-17 | 112 |
hemolymphoid system | 1.72e-15 | 108 |
vasculature | 7.20e-14 | 78 |
vascular system | 7.20e-14 | 78 |
hematopoietic system | 7.91e-14 | 98 |
blood island | 7.91e-14 | 98 |
splanchnic layer of lateral plate mesoderm | 4.82e-13 | 83 |
musculoskeletal system | 9.19e-13 | 167 |
vessel | 1.53e-12 | 68 |
immune system | 4.03e-12 | 93 |
epithelial tube open at both ends | 3.60e-11 | 59 |
blood vessel | 3.60e-11 | 59 |
blood vasculature | 3.60e-11 | 59 |
vascular cord | 3.60e-11 | 59 |
artery | 5.58e-11 | 42 |
arterial blood vessel | 5.58e-11 | 42 |
arterial system | 5.58e-11 | 42 |
bone marrow | 6.68e-11 | 76 |
skeletal element | 7.54e-11 | 90 |
bone element | 8.32e-11 | 82 |
skeletal system | 2.64e-10 | 100 |
systemic artery | 1.17e-09 | 33 |
systemic arterial system | 1.17e-09 | 33 |
epithelial tube | 6.33e-07 | 117 |