FFCP PHASE1:Hg19::chr16:81272273..81272286,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=53630 | |EntrezGene=53630 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=13815 | |HGNC=13815 | ||
|TSSclassifier=strong | |||
|UniProt=E7EM88 | |UniProt=E7EM88 | ||
|association_with_transcript=-7bp_to_ENST00000425577_5end | |association_with_transcript=-7bp_to_ENST00000425577_5end | ||
|cluster_id=chr16:81272273..81272286,+ | |||
|coexpression_cluster_id=C24 | |coexpression_cluster_id=C24 | ||
|description=CAGE_peak_2_at_BCMO1_5end | |description=CAGE_peak_2_at_BCMO1_5end | ||
|id=chr16:81272273..81272286,+ | |id=chr16:81272273..81272286,+ | ||
|ontology_enrichment_celltype=CL:0002535!5.75e-07!2 | |ontology_enrichment_celltype=CL:0002535!5.75e-07!2 | ||
|ontology_enrichment_celltype_v019=CL:0000243;9.37e-07;15!CL:0000125;9.37e-07;15 | |||
|ontology_enrichment_celltype_v019_2=CL:0000243,9.10e-07,15;CL:0000125,9.10e-07,15;CL:0000030,9.10e-07,15;CL:0000339,9.10e-07,15 | |||
|ontology_enrichment_development_v019=UBERON:0003056;7.69e-34;3!UBERON:0006238;6.06e-10;10!CL:0000339;9.37e-07;15 | |||
|ontology_enrichment_disease=DOID:299!1.08e-08!25;DOID:4468!1.55e-07!2 | |ontology_enrichment_disease=DOID:299!1.08e-08!25;DOID:4468!1.55e-07!2 | ||
|ontology_enrichment_disease_v019=DOID:3093;3.41e-09;11 | |||
|ontology_enrichment_disease_v019_2=DOID:3093,3.27e-09,11 | |||
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|ontology_enrichment_uberon_v019=UBERON:0001905;8.82e-51;2!UBERON:0002757;8.82e-51;2!UBERON:0010134;8.82e-51;2!UBERON:0005408;8.82e-51;2!UBERON:0001899;8.82e-51;2!UBERON:0003296;5.23e-26;4!UBERON:0010133;5.23e-26;4!UBERON:0002784;5.23e-26;4!UBERON:0000966;8.98e-21;5!UBERON:0005388;8.98e-21;5!UBERON:0001802;8.98e-21;5!UBERON:0001894;2.47e-15;7!UBERON:0000970;7.97e-12;20!UBERON:0002104;2.70e-11;21!UBERON:0000020;2.26e-10;23!UBERON:0001032;5.74e-10;24!UBERON:0004456;5.74e-10;24!UBERON:0001896;1.53e-09;3!UBERON:0005290;1.53e-09;3 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001905,8.82e-51,2;UBERON:0002757,8.82e-51,2;UBERON:0010134,8.82e-51,2;UBERON:0005408,8.82e-51,2;UBERON:0001899,8.82e-51,2;UBERON:0003296,5.23e-26,4;UBERON:0010133,5.23e-26,4;UBERON:0002784,5.23e-26,4;UBERON:0000966,1.85e-17,6;UBERON:0005388,1.85e-17,6;UBERON:0001802,1.85e-17,6;UBERON:0001894,2.47e-15,7;UBERON:0006222,2.47e-15,7;UBERON:0000970,2.80e-11,21;UBERON:0002104,2.80e-11,21;UBERON:0000020,5.92e-10,24;UBERON:0001032,5.92e-10,24;UBERON:0004456,5.92e-10,24;UBERON:0001896,1.41e-09,3;UBERON:0005290,1.41e-09,3;UBERON:0010096,1.41e-09,3;UBERON:0000955,4.01e-09,68;UBERON:0006238,4.01e-09,68;UBERON:0003075,9.98e-08,82;UBERON:0007284,9.98e-08,82;UBERON:0001017,1.01e-07,81;UBERON:0002346,2.23e-07,86;UBERON:0001016,5.59e-07,89;UBERON:0003056,7.52e-07,61;UBERON:0010314,8.73e-07,132 | |||
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| ||
|short_description=p2@BCMO1 | |short_description=p2@BCMO1 | ||
}} | }} |
Latest revision as of 00:48, 18 September 2015
Short description: | p2@BCMO1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_2_at_BCMO1_5end |
Coexpression cluster: | C24_pineal_eye_retina_retinoblastoma_medulloblastoma_small_cerebral |
Association with transcript: | -7bp_to_ENST00000425577_5end |
EntrezGene: | BCMO1 |
HGNC: | 13815 |
UniProt: | E7EM88 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
glial cell (sensu Vertebrata) | 9.10e-07 | 15 |
glial cell | 9.10e-07 | 15 |
glioblast | 9.10e-07 | 15 |
glioblast (sensu Vertebrata) | 9.10e-07 | 15 |
Ontology term | p-value | n |
---|---|---|
pineal body | 8.82e-51 | 2 |
regional part of epithalamus | 8.82e-51 | 2 |
secretory circumventricular organ | 8.82e-51 | 2 |
circumventricular organ | 8.82e-51 | 2 |
epithalamus | 8.82e-51 | 2 |
gland of diencephalon | 5.23e-26 | 4 |
neuroendocrine gland | 5.23e-26 | 4 |
regional part of diencephalon | 5.23e-26 | 4 |
retina | 1.85e-17 | 6 |
photoreceptor array | 1.85e-17 | 6 |
posterior segment of eyeball | 1.85e-17 | 6 |
diencephalon | 2.47e-15 | 7 |
future diencephalon | 2.47e-15 | 7 |
eye | 2.80e-11 | 21 |
visual system | 2.80e-11 | 21 |
sense organ | 5.92e-10 | 24 |
sensory system | 5.92e-10 | 24 |
entire sense organ system | 5.92e-10 | 24 |
medulla oblongata | 1.41e-09 | 3 |
myelencephalon | 1.41e-09 | 3 |
future myelencephalon | 1.41e-09 | 3 |
brain | 4.01e-09 | 68 |
future brain | 4.01e-09 | 68 |
neural plate | 9.98e-08 | 82 |
presumptive neural plate | 9.98e-08 | 82 |
central nervous system | 1.01e-07 | 81 |
neurectoderm | 2.23e-07 | 86 |
nervous system | 5.59e-07 | 89 |
pre-chordal neural plate | 7.52e-07 | 61 |
structure with developmental contribution from neural crest | 8.73e-07 | 132 |
Ontology term | p-value | n |
---|---|---|
nervous system cancer | 3.27e-09 | 11 |