FFCP PHASE1:Hg19::chr15:52312159..52312192,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=5597 | |EntrezGene=5597 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=6879 | |HGNC=6879 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=40bp_to_ENST00000558841_5end | |association_with_transcript=40bp_to_ENST00000558841_5end | ||
|cluster_id=chr15:52312159..52312192,+ | |||
|coexpression_cluster_id=C0 | |||
|description=CAGE_peak_3_at_MAPK6_5end | |description=CAGE_peak_3_at_MAPK6_5end | ||
|id=chr15:52312159..52312192,+ | |id=chr15:52312159..52312192,+ | ||
|ontology_enrichment_celltype=CL:0000766!2.80e-30!76;CL:0002057!1.57e-26!42;CL:0000557!2.32e-26!71;CL:0002009!7.02e-25!65;CL:0000839!9.66e-25!70;CL:0000860!3.71e-24!45;CL:0002194!7.34e-24!63;CL:0000576!7.34e-24!63;CL:0000040!7.34e-24!63;CL:0000559!7.34e-24!63;CL:0000134!5.89e-17!358;CL:0000063!1.83e-16!578;CL:0002320!2.36e-16!365;CL:0002371!9.00e-16!591;CL:0000723!1.28e-15!436;CL:0000144!2.26e-15!625;CL:0000048!2.39e-15!430;CL:0000548!1.69e-14!679;CL:0000004!1.69e-14!679;CL:0000255!1.69e-14!679;CL:0000034!2.29e-14!444;CL:0000012!2.34e-14!682;CL:0000219!3.70e-14!390;CL:0000738!9.42e-13!140;CL:0000763!9.54e-13!112;CL:0000049!9.54e-13!112;CL:0002031!2.25e-09!124;CL:0000003!1.16e-08!722;CL:0002087!2.08e-08!119 | |ontology_enrichment_celltype=CL:0000766!2.80e-30!76;CL:0002057!1.57e-26!42;CL:0000557!2.32e-26!71;CL:0002009!7.02e-25!65;CL:0000839!9.66e-25!70;CL:0000860!3.71e-24!45;CL:0002194!7.34e-24!63;CL:0000576!7.34e-24!63;CL:0000040!7.34e-24!63;CL:0000559!7.34e-24!63;CL:0000134!5.89e-17!358;CL:0000063!1.83e-16!578;CL:0002320!2.36e-16!365;CL:0002371!9.00e-16!591;CL:0000723!1.28e-15!436;CL:0000144!2.26e-15!625;CL:0000048!2.39e-15!430;CL:0000548!1.69e-14!679;CL:0000004!1.69e-14!679;CL:0000255!1.69e-14!679;CL:0000034!2.29e-14!444;CL:0000012!2.34e-14!682;CL:0000219!3.70e-14!390;CL:0000738!9.42e-13!140;CL:0000763!9.54e-13!112;CL:0000049!9.54e-13!112;CL:0002031!2.25e-09!124;CL:0000003!1.16e-08!722;CL:0002087!2.08e-08!119 | ||
|ontology_enrichment_celltype_v019=CL:0000860;7.23e-25;33!CL:0002057;7.23e-25;33!CL:0000473;7.85e-23;39!CL:0000234;7.85e-23;39!CL:0000576;6.91e-19;48!CL:0000766;3.88e-17;69 | |||
|ontology_enrichment_celltype_v019_2=CL:0000766,1.64e-39,72;CL:0000473,1.27e-35,48;CL:0000234,1.27e-35,48;CL:0000557,6.48e-35,67;CL:0000860,4.83e-33,42;CL:0002057,4.83e-33,42;CL:0000839,1.18e-32,66;CL:0002009,1.22e-32,61;CL:0002194,2.46e-31,59;CL:0000576,2.46e-31,59;CL:0000040,2.46e-31,59;CL:0000559,2.46e-31,59;CL:0000134,1.45e-23,354;CL:0002320,7.52e-22,361;CL:0000219,6.97e-21,386;CL:0000723,1.32e-20,433;CL:0000048,7.03e-20,427;CL:0000034,1.26e-19,441;CL:0000763,3.81e-18,108;CL:0000049,3.81e-18,108;CL:0000738,6.94e-18,136;CL:0002031,1.07e-13,120;CL:0002087,3.12e-12,115;CL:0000037,4.86e-09,168;CL:0002032,3.67e-08,161;CL:0000837,3.67e-08,161;CL:0000988,3.83e-08,177;CL:0002393,3.67e-07,9;CL:0002397,3.67e-07,9 | |||
|ontology_enrichment_development_v019=CL:0002057;4.80e-24;42 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002371!1.41e-25!80;UBERON:0001474!6.27e-24!86;UBERON:0004765!2.26e-22!101;UBERON:0001434!2.26e-22!101;UBERON:0002405!3.13e-20!115;UBERON:0002390!7.00e-16!102;UBERON:0003061!7.00e-16!102;UBERON:0002384!8.76e-16!375;UBERON:0002204!1.15e-14!167;UBERON:0002193!7.48e-14!112 | |||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002371,6.43e-34,76;UBERON:0001474,3.74e-31,82;UBERON:0004765,5.94e-29,90;UBERON:0001434,1.70e-24,100;UBERON:0002405,1.26e-23,93;UBERON:0002390,1.20e-22,98;UBERON:0003061,1.20e-22,98;UBERON:0002384,2.46e-21,371;UBERON:0002193,4.53e-19,108;UBERON:0002204,4.21e-15,167;UBERON:0003081,5.57e-09,203;UBERON:0000926,7.94e-09,315;UBERON:0004120,7.94e-09,315;UBERON:0006603,7.94e-09,315 | |||
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| ||
|short_description=p3@MAPK6 | |short_description=p3@MAPK6 | ||
}} | }} |
Latest revision as of 02:08, 18 September 2015
Short description: | p3@MAPK6 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_3_at_MAPK6_5end |
Coexpression cluster: | C0_CD14_Eosinophils_Neutrophils_Basophils_CD34_immature_Peripheral |
Association with transcript: | 40bp_to_ENST00000558841_5end |
EntrezGene: | MAPK6 |
HGNC: | 6879 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
myeloid leukocyte | 1.64e-39 | 72 |
defensive cell | 1.27e-35 | 48 |
phagocyte | 1.27e-35 | 48 |
granulocyte monocyte progenitor cell | 6.48e-35 | 67 |
classical monocyte | 4.83e-33 | 42 |
CD14-positive, CD16-negative classical monocyte | 4.83e-33 | 42 |
myeloid lineage restricted progenitor cell | 1.18e-32 | 66 |
macrophage dendritic cell progenitor | 1.22e-32 | 61 |
monopoietic cell | 2.46e-31 | 59 |
monocyte | 2.46e-31 | 59 |
monoblast | 2.46e-31 | 59 |
promonocyte | 2.46e-31 | 59 |
mesenchymal cell | 1.45e-23 | 354 |
connective tissue cell | 7.52e-22 | 361 |
motile cell | 6.97e-21 | 386 |
somatic stem cell | 1.32e-20 | 433 |
multi fate stem cell | 7.03e-20 | 427 |
stem cell | 1.26e-19 | 441 |
myeloid cell | 3.81e-18 | 108 |
common myeloid progenitor | 3.81e-18 | 108 |
leukocyte | 6.94e-18 | 136 |
hematopoietic lineage restricted progenitor cell | 1.07e-13 | 120 |
nongranular leukocyte | 3.12e-12 | 115 |
hematopoietic stem cell | 4.86e-09 | 168 |
hematopoietic oligopotent progenitor cell | 3.67e-08 | 161 |
hematopoietic multipotent progenitor cell | 3.67e-08 | 161 |
hematopoietic cell | 3.83e-08 | 177 |
intermediate monocyte | 3.67e-07 | 9 |
CD14-positive, CD16-positive monocyte | 3.67e-07 | 9 |
Ontology term | p-value | n |
---|---|---|
bone marrow | 6.43e-34 | 76 |
bone element | 3.74e-31 | 82 |
skeletal element | 5.94e-29 | 90 |
skeletal system | 1.70e-24 | 100 |
immune system | 1.26e-23 | 93 |
hematopoietic system | 1.20e-22 | 98 |
blood island | 1.20e-22 | 98 |
connective tissue | 2.46e-21 | 371 |
hemolymphoid system | 4.53e-19 | 108 |
musculoskeletal system | 4.21e-15 | 167 |
lateral plate mesoderm | 5.57e-09 | 203 |
mesoderm | 7.94e-09 | 315 |
mesoderm-derived structure | 7.94e-09 | 315 |
presumptive mesoderm | 7.94e-09 | 315 |