FFCP PHASE1:Hg19::chr2:69002322..69002352,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=9938 | |EntrezGene=9938 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=28951 | |HGNC=28951 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=286bp_to_uc010fdh.1_5end | |association_with_transcript=286bp_to_uc010fdh.1_5end | ||
|cluster_id=chr2:69002322..69002352,+ | |||
|coexpression_cluster_id=C17 | |||
|description=CAGE_peak_11_at_ARHGAP25_5end | |description=CAGE_peak_11_at_ARHGAP25_5end | ||
|id=chr2:69002322..69002352,+ | |id=chr2:69002322..69002352,+ | ||
|ontology_enrichment_celltype=CL:0000766!1.85e-46!76;CL:0000738!2.95e-43!140;CL:0002032!5.78e-43!165;CL:0000837!5.78e-43!165;CL:0000037!9.99e-43!172;CL:0000566!9.99e-43!172;CL:0000763!7.60e-42!112;CL:0000049!7.60e-42!112;CL:0002057!1.02e-39!42;CL:0000988!5.95e-39!182;CL:0000839!2.48e-36!70;CL:0000860!3.21e-36!45;CL:0000557!1.33e-35!71;CL:0002031!6.84e-33!124;CL:0002194!1.89e-31!63;CL:0000576!1.89e-31!63;CL:0000040!1.89e-31!63;CL:0000559!1.89e-31!63;CL:0002087!1.92e-31!119;CL:0002009!4.57e-30!65;CL:0000094!2.93e-10!8;CL:0000134!3.56e-10!358;CL:0002320!1.46e-09!365;CL:0002274!5.89e-09!5;CL:0000457!5.89e-09!5;CL:0002191!5.89e-09!5;CL:0000097!5.89e-09!5;CL:0000831!5.89e-09!5;CL:0002028!5.89e-09!5;CL:0000219!1.87e-07!390;CL:0002393!2.77e-07!9;CL:0002397!2.77e-07!9;CL:0000081!4.99e-07!11 | |ontology_enrichment_celltype=CL:0000766!1.85e-46!76;CL:0000738!2.95e-43!140;CL:0002032!5.78e-43!165;CL:0000837!5.78e-43!165;CL:0000037!9.99e-43!172;CL:0000566!9.99e-43!172;CL:0000763!7.60e-42!112;CL:0000049!7.60e-42!112;CL:0002057!1.02e-39!42;CL:0000988!5.95e-39!182;CL:0000839!2.48e-36!70;CL:0000860!3.21e-36!45;CL:0000557!1.33e-35!71;CL:0002031!6.84e-33!124;CL:0002194!1.89e-31!63;CL:0000576!1.89e-31!63;CL:0000040!1.89e-31!63;CL:0000559!1.89e-31!63;CL:0002087!1.92e-31!119;CL:0002009!4.57e-30!65;CL:0000094!2.93e-10!8;CL:0000134!3.56e-10!358;CL:0002320!1.46e-09!365;CL:0002274!5.89e-09!5;CL:0000457!5.89e-09!5;CL:0002191!5.89e-09!5;CL:0000097!5.89e-09!5;CL:0000831!5.89e-09!5;CL:0002028!5.89e-09!5;CL:0000219!1.87e-07!390;CL:0002393!2.77e-07!9;CL:0002397!2.77e-07!9;CL:0000081!4.99e-07!11 | ||
|ontology_enrichment_celltype_v019=CL:0000860;7.49e-39;33!CL:0002057;7.49e-39;33!CL:0000473;1.07e-29;39!CL:0000234;1.07e-29;39!CL:0000576;6.48e-21;48!CL:0000766;1.56e-20;69!CL:0000775;6.85e-15;3!CL:0000097;1.49e-14;5!CL:0000094;1.61e-14;8!CL:0000763;1.43e-10;100!CL:0000081;1.83e-10;11!CL:0000771;2.83e-10;2!CL:0000738;5.94e-09;136!CL:0000163;4.15e-08;9 | |||
|ontology_enrichment_celltype_v019_2=CL:0000766,2.04e-46,72;CL:0000860,1.38e-35,42;CL:0002057,1.38e-35,42;CL:0000473,8.57e-34,48;CL:0000234,8.57e-34,48;CL:0000839,9.58e-34,66;CL:0000557,3.68e-33,67;CL:0000763,6.79e-31,108;CL:0000049,6.79e-31,108;CL:0000738,9.62e-29,136;CL:0002194,5.00e-26,59;CL:0000576,5.00e-26,59;CL:0000040,5.00e-26,59;CL:0000559,5.00e-26,59;CL:0002009,5.02e-25,61;CL:0002032,9.81e-25,161;CL:0000837,9.81e-25,161;CL:0000037,2.19e-23,168;CL:0002031,1.01e-22,120;CL:0000988,8.32e-22,177;CL:0002087,8.98e-17,115;CL:0000775,6.87e-15,3;CL:0000094,1.60e-14,8;CL:0000097,1.85e-14,5;CL:0002028,1.85e-14,5;CL:0000081,1.81e-10,11;CL:0000771,2.77e-10,2;CL:0000163,4.65e-08,9;CL:0000134,8.98e-08,354;CL:0002320,1.79e-07,361 | |||
|ontology_enrichment_development_v019=CL:0002057;1.29e-26;42!CL:0000049;4.46e-12;108 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002390!3.65e-42!102;UBERON:0003061!3.65e-42!102;UBERON:0002193!2.70e-41!112;UBERON:0002371!7.01e-30!80;UBERON:0001474!9.59e-27!86;UBERON:0002405!1.31e-24!115;UBERON:0004765!1.30e-21!101;UBERON:0001434!1.30e-21!101;UBERON:0003081!2.22e-13!216;UBERON:0000178!9.04e-10!15;UBERON:0000179!9.04e-10!15;UBERON:0000463!9.04e-10!15;UBERON:0002384!3.56e-09!375;UBERON:0002204!2.19e-08!167 | |ontology_enrichment_uberon=UBERON:0002390!3.65e-42!102;UBERON:0003061!3.65e-42!102;UBERON:0002193!2.70e-41!112;UBERON:0002371!7.01e-30!80;UBERON:0001474!9.59e-27!86;UBERON:0002405!1.31e-24!115;UBERON:0004765!1.30e-21!101;UBERON:0001434!1.30e-21!101;UBERON:0003081!2.22e-13!216;UBERON:0000178!9.04e-10!15;UBERON:0000179!9.04e-10!15;UBERON:0000463!9.04e-10!15;UBERON:0002384!3.56e-09!375;UBERON:0002204!2.19e-08!167 | ||
|ontology_enrichment_uberon_v019=UBERON:0000178;2.39e-18;15!UBERON:0000179;2.39e-18;15!UBERON:0000463;2.39e-18;15!UBERON:0002390;1.63e-07;32 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002390,2.96e-40,98;UBERON:0003061,2.96e-40,98;UBERON:0002193,2.20e-38,108;UBERON:0002371,1.39e-28,76;UBERON:0001474,4.37e-26,82;UBERON:0002405,1.93e-24,93;UBERON:0004765,2.86e-23,90;UBERON:0001434,2.22e-20,100;UBERON:0000178,2.43e-18,15;UBERON:0000179,2.43e-18,15;UBERON:0000463,2.43e-18,15;UBERON:0003081,7.28e-17,203;UBERON:0002204,5.87e-10,167;UBERON:0000926,5.67e-09,315;UBERON:0004120,5.67e-09,315;UBERON:0006603,5.67e-09,315;UBERON:0002384,4.58e-07,371 | |||
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| ||
|short_description=p11@ARHGAP25 | |short_description=p11@ARHGAP25 | ||
}} | }} |
Latest revision as of 03:11, 18 September 2015
Short description: | p11@ARHGAP25 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_11_at_ARHGAP25_5end |
Coexpression cluster: | C17_Mast_CD14_Monocytederived_Lymphatic_Smooth_mesenchymal_Macrophage |
Association with transcript: | 286bp_to_uc010fdh.1_5end |
EntrezGene: | ARHGAP25 |
HGNC: | 28951 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
myeloid leukocyte | 2.04e-46 | 72 |
classical monocyte | 1.38e-35 | 42 |
CD14-positive, CD16-negative classical monocyte | 1.38e-35 | 42 |
defensive cell | 8.57e-34 | 48 |
phagocyte | 8.57e-34 | 48 |
myeloid lineage restricted progenitor cell | 9.58e-34 | 66 |
granulocyte monocyte progenitor cell | 3.68e-33 | 67 |
myeloid cell | 6.79e-31 | 108 |
common myeloid progenitor | 6.79e-31 | 108 |
leukocyte | 9.62e-29 | 136 |
monopoietic cell | 5.00e-26 | 59 |
monocyte | 5.00e-26 | 59 |
monoblast | 5.00e-26 | 59 |
promonocyte | 5.00e-26 | 59 |
macrophage dendritic cell progenitor | 5.02e-25 | 61 |
hematopoietic oligopotent progenitor cell | 9.81e-25 | 161 |
hematopoietic multipotent progenitor cell | 9.81e-25 | 161 |
hematopoietic stem cell | 2.19e-23 | 168 |
hematopoietic lineage restricted progenitor cell | 1.01e-22 | 120 |
hematopoietic cell | 8.32e-22 | 177 |
nongranular leukocyte | 8.98e-17 | 115 |
neutrophil | 6.87e-15 | 3 |
granulocyte | 1.60e-14 | 8 |
mast cell | 1.85e-14 | 5 |
basophil mast progenitor cell | 1.85e-14 | 5 |
blood cell | 1.81e-10 | 11 |
eosinophil | 2.77e-10 | 2 |
endocrine cell | 4.65e-08 | 9 |
mesenchymal cell | 8.98e-08 | 354 |
connective tissue cell | 1.79e-07 | 361 |
Ontology term | p-value | n |
---|---|---|
hematopoietic system | 2.96e-40 | 98 |
blood island | 2.96e-40 | 98 |
hemolymphoid system | 2.20e-38 | 108 |
bone marrow | 1.39e-28 | 76 |
bone element | 4.37e-26 | 82 |
immune system | 1.93e-24 | 93 |
skeletal element | 2.86e-23 | 90 |
skeletal system | 2.22e-20 | 100 |
blood | 2.43e-18 | 15 |
haemolymphatic fluid | 2.43e-18 | 15 |
organism substance | 2.43e-18 | 15 |
lateral plate mesoderm | 7.28e-17 | 203 |
musculoskeletal system | 5.87e-10 | 167 |
mesoderm | 5.67e-09 | 315 |
mesoderm-derived structure | 5.67e-09 | 315 |
presumptive mesoderm | 5.67e-09 | 315 |
connective tissue | 4.58e-07 | 371 |