FFCP PHASE1:Hg19::chr16:85096580..85096602,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=9764 | |EntrezGene=9764 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=29058 | |HGNC=29058 | ||
|TSSclassifier=strong | |||
|UniProt=O60268 | |UniProt=O60268 | ||
|association_with_transcript=-215bp_to_AB011085_5end | |association_with_transcript=-215bp_to_AB011085_5end | ||
|cluster_id=chr16:85096580..85096602,+ | |||
|coexpression_cluster_id=C92 | |coexpression_cluster_id=C92 | ||
|description=CAGE_peak_3_at_KIAA0513_5end | |description=CAGE_peak_3_at_KIAA0513_5end | ||
|id=chr16:85096580..85096602,+ | |id=chr16:85096580..85096602,+ | ||
|ontology_enrichment_celltype=CL:0002057!7.67e-121!42;CL:0000860!3.12e-112!45;CL:0000766!3.43e-86!76;CL:0002194!2.02e-85!63;CL:0000576!2.02e-85!63;CL:0000040!2.02e-85!63;CL:0000559!2.02e-85!63;CL:0002009!1.43e-82!65;CL:0000839!3.75e-76!70;CL:0000557!5.64e-75!71;CL:0000763!7.40e-56!112;CL:0000049!7.40e-56!112;CL:0000738!1.28e-47!140;CL:0002087!1.96e-46!119;CL:0002031!7.69e-42!124;CL:0000037!4.27e-37!172;CL:0000566!4.27e-37!172;CL:0002032!4.64e-37!165;CL:0000837!4.64e-37!165;CL:0000988!1.46e-34!182;CL:0002393!1.04e-29!9;CL:0002397!1.04e-29!9;CL:0000875!3.64e-14!3;CL:0002396!3.64e-14!3;CL:0000134!5.26e-13!358;CL:0002320!1.42e-12!365;CL:0000219!4.65e-11!390;CL:0000048!3.02e-09!430;CL:0000723!5.47e-09!436;CL:0000034!1.18e-08!444;CL:0000094!2.99e-08!8 | |ontology_enrichment_celltype=CL:0002057!7.67e-121!42;CL:0000860!3.12e-112!45;CL:0000766!3.43e-86!76;CL:0002194!2.02e-85!63;CL:0000576!2.02e-85!63;CL:0000040!2.02e-85!63;CL:0000559!2.02e-85!63;CL:0002009!1.43e-82!65;CL:0000839!3.75e-76!70;CL:0000557!5.64e-75!71;CL:0000763!7.40e-56!112;CL:0000049!7.40e-56!112;CL:0000738!1.28e-47!140;CL:0002087!1.96e-46!119;CL:0002031!7.69e-42!124;CL:0000037!4.27e-37!172;CL:0000566!4.27e-37!172;CL:0002032!4.64e-37!165;CL:0000837!4.64e-37!165;CL:0000988!1.46e-34!182;CL:0002393!1.04e-29!9;CL:0002397!1.04e-29!9;CL:0000875!3.64e-14!3;CL:0002396!3.64e-14!3;CL:0000134!5.26e-13!358;CL:0002320!1.42e-12!365;CL:0000219!4.65e-11!390;CL:0000048!3.02e-09!430;CL:0000723!5.47e-09!436;CL:0000034!1.18e-08!444;CL:0000094!2.99e-08!8 | ||
|ontology_enrichment_celltype_v019=CL:0000875;6.84e-51;3!CL:0002396;6.84e-51;3!CL:0000576;4.99e-25;48!CL:0000766;2.28e-19;69!CL:0000860;3.45e-15;33!CL:0002057;3.45e-15;33!CL:0000473;5.20e-14;39!CL:0000234;5.20e-14;39!CL:0002393;5.08e-12;6!CL:0002397;5.08e-12;6!CL:0000763;5.76e-09;100!CL:0000775;6.88e-07;3 | |||
|ontology_enrichment_celltype_v019_2=CL:0000875,8.11e-51,3;CL:0002396,8.11e-51,3;CL:0000860,1.64e-46,42;CL:0002057,1.64e-46,42;CL:0002393,3.73e-46,9;CL:0002397,3.73e-46,9;CL:0000473,1.26e-40,48;CL:0000234,1.26e-40,48;CL:0002194,2.25e-32,59;CL:0000576,2.25e-32,59;CL:0000040,2.25e-32,59;CL:0000559,2.25e-32,59;CL:0000766,1.11e-31,72;CL:0002009,2.61e-31,61;CL:0000839,6.36e-29,66;CL:0000557,1.73e-28,67;CL:0000763,5.64e-21,108;CL:0000049,5.64e-21,108;CL:0000738,1.60e-16,136;CL:0002087,2.18e-16,115;CL:0002031,1.12e-15,120;CL:0002032,7.73e-14,161;CL:0000837,7.73e-14,161;CL:0000037,3.15e-13,168;CL:0000988,1.64e-12,177;CL:0000775,6.50e-07,3 | |||
|ontology_enrichment_development_v019=CL:0002057;3.33e-34;42!CL:0000049;1.01e-08;108 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002371!1.09e-65!80;UBERON:0002390!5.22e-65!102;UBERON:0003061!5.22e-65!102;UBERON:0001474!1.46e-60!86;UBERON:0002193!1.89e-58!112;UBERON:0004765!2.19e-50!101;UBERON:0001434!2.19e-50!101;UBERON:0002405!9.48e-46!115;UBERON:0002204!3.47e-27!167;UBERON:0003081!5.02e-26!216;UBERON:0002384!5.47e-12!375;UBERON:0000926!9.25e-08!448;UBERON:0004120!9.25e-08!448;UBERON:0006603!9.25e-08!448 | |ontology_enrichment_uberon=UBERON:0002371!1.09e-65!80;UBERON:0002390!5.22e-65!102;UBERON:0003061!5.22e-65!102;UBERON:0001474!1.46e-60!86;UBERON:0002193!1.89e-58!112;UBERON:0004765!2.19e-50!101;UBERON:0001434!2.19e-50!101;UBERON:0002405!9.48e-46!115;UBERON:0002204!3.47e-27!167;UBERON:0003081!5.02e-26!216;UBERON:0002384!5.47e-12!375;UBERON:0000926!9.25e-08!448;UBERON:0004120!9.25e-08!448;UBERON:0006603!9.25e-08!448 | ||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002371,4.46e-25,76;UBERON:0001474,3.27e-23,82;UBERON:0004765,4.17e-21,90;UBERON:0002405,2.08e-20,93;UBERON:0002390,2.44e-19,98;UBERON:0003061,2.44e-19,98;UBERON:0001434,6.12e-19,100;UBERON:0002193,1.72e-17,108;UBERON:0002204,4.82e-11,167;UBERON:0003081,6.34e-09,203 | |||
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| ||
|short_description=p3@KIAA0513 | |short_description=p3@KIAA0513 | ||
}} | }} |
Latest revision as of 04:38, 18 September 2015
Short description: | p3@KIAA0513 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_3_at_KIAA0513_5end |
Coexpression cluster: | C92_CD14CD16_CD14_Eosinophils_Basophils_Neutrophils_Macrophage_Whole |
Association with transcript: | -215bp_to_AB011085_5end |
EntrezGene: | KIAA0513 |
HGNC: | 29058 |
UniProt: | O60268 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
non-classical monocyte | 8.11e-51 | 3 |
CD14-low, CD16-positive monocyte | 8.11e-51 | 3 |
classical monocyte | 1.64e-46 | 42 |
CD14-positive, CD16-negative classical monocyte | 1.64e-46 | 42 |
intermediate monocyte | 3.73e-46 | 9 |
CD14-positive, CD16-positive monocyte | 3.73e-46 | 9 |
defensive cell | 1.26e-40 | 48 |
phagocyte | 1.26e-40 | 48 |
monopoietic cell | 2.25e-32 | 59 |
monocyte | 2.25e-32 | 59 |
monoblast | 2.25e-32 | 59 |
promonocyte | 2.25e-32 | 59 |
myeloid leukocyte | 1.11e-31 | 72 |
macrophage dendritic cell progenitor | 2.61e-31 | 61 |
myeloid lineage restricted progenitor cell | 6.36e-29 | 66 |
granulocyte monocyte progenitor cell | 1.73e-28 | 67 |
myeloid cell | 5.64e-21 | 108 |
common myeloid progenitor | 5.64e-21 | 108 |
leukocyte | 1.60e-16 | 136 |
nongranular leukocyte | 2.18e-16 | 115 |
hematopoietic lineage restricted progenitor cell | 1.12e-15 | 120 |
hematopoietic oligopotent progenitor cell | 7.73e-14 | 161 |
hematopoietic multipotent progenitor cell | 7.73e-14 | 161 |
hematopoietic stem cell | 3.15e-13 | 168 |
hematopoietic cell | 1.64e-12 | 177 |
neutrophil | 6.50e-07 | 3 |
Ontology term | p-value | n |
---|---|---|
bone marrow | 4.46e-25 | 76 |
bone element | 3.27e-23 | 82 |
skeletal element | 4.17e-21 | 90 |
immune system | 2.08e-20 | 93 |
hematopoietic system | 2.44e-19 | 98 |
blood island | 2.44e-19 | 98 |
skeletal system | 6.12e-19 | 100 |
hemolymphoid system | 1.72e-17 | 108 |
musculoskeletal system | 4.82e-11 | 167 |
lateral plate mesoderm | 6.34e-09 | 203 |