FFCP PHASE1:Hg19::chr1:161129245..161129250,+: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=27005 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=12620 | |||
|TSSclassifier=strong | |||
|UniProt=Q9UK80 | |||
|association_with_transcript=-3bp_to_ENST00000368002,NM_001014443,NM_012475,uc010pkc.1,uc010pkd.1,uc010pke.1,uc010pkf.1_5end | |||
|cluster_id=chr1:161129245..161129250,+ | |||
|description=CAGE_peak_2_at_USP21_5end | |||
|id=chr1:161129245..161129250,+ | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019=CL:0002581;3.81e-21;1!CL:0000047;2.87e-11;2!CL:0000650;2.87e-11;2!CL:1000500;2.87e-11;2!CL:1000618;2.87e-11;2!CL:1001318;2.87e-11;2!CL:0002262;2.87e-11;2!CL:1000398;2.87e-11;2!CL:0002173;2.87e-11;2!CL:1000507;6.53e-09;10!CL:1000494;6.53e-09;10!CL:0002564;6.13e-08;3!CL:0000307;6.13e-08;3 | |||
|ontology_enrichment_celltype_v019_2=CL:0002581,1.88e-21,1;CL:0002262,2.73e-11,2;CL:1000398,2.73e-11,2;CL:0000650,4.09e-11,2;CL:1000500,4.09e-11,2;CL:1000618,4.09e-11,2;CL:1001318,4.09e-11,2;CL:0002173,4.09e-11,2;CL:1000507,6.28e-09,10;CL:1000494,6.28e-09,10;CL:0000068,7.26e-08,3;CL:0000069,7.26e-08,3;CL:0000307,7.26e-08,3;CL:0000377,7.26e-08,3;CL:0002564,8.29e-08,3 | |||
|ontology_enrichment_development_v019=CL:0000377;6.13e-08;3 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon= | |||
|ontology_enrichment_uberon_v019=UBERON:0001281;2.87e-11;2!UBERON:0003497;2.87e-11;2!UBERON:0003909;2.87e-11;2!UBERON:0003567;2.87e-11;2!UBERON:0003835;2.87e-11;2!UBERON:0003838;2.87e-11;2!UBERON:0003586;2.87e-11;2!UBERON:0005169;2.87e-11;2!UBERON:0002321;2.87e-11;2!UBERON:0005406;2.87e-11;2!UBERON:0005215;2.87e-11;2!UBERON:0002303;2.87e-11;2!UBERON:0002319;2.87e-11;2!UBERON:0004211;6.53e-09;10!UBERON:0009773;6.53e-09;10!UBERON:0001231;6.53e-09;10!UBERON:0004810;6.53e-09;10!UBERON:0002242;6.13e-08;3!UBERON:0001280;6.13e-08;3!UBERON:0004647;6.13e-08;3 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0005406,2.02e-11,2;UBERON:0001281,2.73e-11,2;UBERON:0003497,2.73e-11,2;UBERON:0003909,2.73e-11,2;UBERON:0003835,2.73e-11,2;UBERON:0003567,4.09e-11,2;UBERON:0003838,4.09e-11,2;UBERON:0003586,4.09e-11,2;UBERON:0005169,4.09e-11,2;UBERON:0002321,4.09e-11,2;UBERON:0005215,4.09e-11,2;UBERON:0002303,4.09e-11,2;UBERON:0002319,4.09e-11,2;UBERON:0004810,6.28e-09,10;UBERON:0001280,5.93e-08,3;UBERON:0004647,5.93e-08,3;UBERON:0005171,5.93e-08,3;UBERON:0002242,8.29e-08,3;UBERON:0003068,8.29e-08,3;UBERON:0002328,8.29e-08,3;UBERON:0004880,8.29e-08,3 | |||
|phase1_expression=0,0.214100523890983,0.140954404095971,0,0.446961094427288,0.872338524100369,0,0,0.522371256399677,0.245733936501509,0.697801167972428,0.436882744260345,0.263766978228454,0.74259811776028,0.331397375727916,0,0,0,0,0.492484232307152,0,0.313454721478088,0.286235987131057,0.273748850145768,0.251085279189606,0.0764134057479513,0,0.0787107813136792,0,0,0,0,0,0,0.309868802321207,0.142169232487422,0,0.553995408531877,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.426224750532694,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.889509253863555,0,0.800791974072025,0.574752439954483,0,0,0,0,0,0,0,0,0,0,0,0.167186495390678,0,0,0,0.111410456885174,0,0,0,0.128091319725675,0.130059347559878,0,0.552700035571697,0,0,0.267540828089713,0,0,0,0,0,0,0,0,0.150575119077773,0.127986611154418,0,0,0,0,0,0,0,0.670700859703636,0,0,0,0.289693037921647,0.795285947051099,0,0.0945348171640679,0,0.087834785693126,0.196468613246569,0.728590576585084,0,0,0,0,0,0,0,0,0,0,0.56530794192401,0.419499436209906,0,0,0.258416759169329,0.35576626268671,0,0,0,0,0,0,0,0.22452937262617,0.225222960966644,0,0.949265659568129,0,0,0,0,0,0,0.264818361626438,0.573673241497627,0,0,0,0.74000264525148,0.311211035399766,0,0,0.151357427644931,0,0.468642863667593,0,0,0,0.822041490506354,0,0.140450806702248,0,0,0,0,0.247266929278557,0,0.718618141816238,0.336672227908132,0.125118519871964,0,0.438977620880838,0,0,0.113432183160021,0.538168907066586,0,0,0.300091096084402,0,0.257640540045629,0.37223371266318,0.337552664482532,0,0,0,0,0,0,0.169560592310488,0.193260853163297,0,0,0.121973706129595,0.132529768321485,0,0.10366105501537,0,0,0,0,0,0,0,0,0.337169380156203,0.482022059766964,0.330881918197182,0,0.237270619111097,0,0.392442930250692,0.38474715694639,0,1.40241773803446,0,0,0,0,0,0.882926198829301,0.491953754172454,0,0.329250856225877,0,0,0.0925884451585296,0,0,0,0.34779121492523,0.234817388471643,0,0,0,0,0.858486162094873,0,0,0,0,0.16798212819886,0,0,0,0,0,0.176096868026452,0,0,0.12624243342638,0,0,0,0,0,0.300343057843917,0,0.112131084345361,0,0.07333828582095,0,0,0,0.26593811658487,0,0.514414748524284,1.41849132023278,0,0,0,0.823240336780769,0,0.355391948742546,0,0.301439377059586,0,0,0,0,0,0.239624855491583,0,0,0.434343920002738,0.410952645100767,0.179060963239896,0,0,0,0,0.254094624222463,1.30139853857622,0,0.167516265334349,0,0,0,0,0.12269149171914,1.00034104211935,0,0,0.178428988797162,0,0.117141414992713,0.300946099727719,0,0,0.664225598535437,0.368738337083406,0.173767228936166,0.783204629850962,0,0,0,0.213455115606889,0.606255142892519,0,0,0.248107807818777,0.306923946576125,0,0.128139149255701,0,0.160853921143607,1.48418066444991,0.154209693802656,0.177561725313127,0.164254312027618,0,0.116210378459959,0.241718899183244,0.200506470303285,0.0920809889358963,0.229628896329213,0.182091168006717,0.262248829918848,0,0,1.56869953835371,0,0.105551628892876,0,0.340187410553031,0.431831832204279,0,0.270946437543853,1.00337954770971,0,0,0,0,0.522870902049801,0,0.328014645699706,0.325378394664303,0.206082023295445,0.27470839445503,0.082509499920588,0,0,0,0.096670718292122,0,0,0.137836572484531,0.107420244868274,0.145016693914229,0.170453254832202,0.178064071293475,0,0.192190067365106,0.255225424989168,0,0,0,0,0,0,0,0,0,0.372158369359667,0,0,0.255897791311334,0,0.318203247925937,0.78494864019923,0,0,0,0,0,0.421258456238981,0.48763373908959,0,0,0,0.282810863907425,0,0,0.66343897524122,0,0,0,0,0,0.281695602532241,0.143411352204052,0.196498082026242,0.35667105148125,0.354761064070598,0.211107635297664,0,0.379473173765715,0.349934720244983,0.192444225451024,0,1.08890984861323,0.0941438007767792,0,0,0,0.229723400206959,0,0,0,0,0,0,0,0,0.106824071127473,0,0,0,0,0.426851060090485,0,0,0.191505370132367,0.423347165447766,0.649243880549111,0,0,0.156679895773023,0,0.338583555603207,0.1605880751037,0.201799707191048,0,0,0,0.671028323677248,0.667396566847634,0,0,0,0.270455678475983,0.33307196799782,1.4098700508785,0.18714054040822,0,0,0.557216921387392,0,0,0,0.307160702099232,0,0.844016498463076,0,0.329607748453519,0,0.597743964753209,0,0,0,0.246169610922139,0,0.179736702294654,0,0,0,0,0,0.969332746095218,0.463840490809256,0,0,0.174919999992391,0,0.227586896570999,0,0.236387681767936,0,0.583209226766509,0.347249989866585,0.885741385813839,0.361789315876224,0,0,0.591095237907095,0.658156191461918,0.32681539055697,0,0,0.341826167541004,0.46112780877612,0,0.434589487688032,0,0.0915975934018623,0,0,0.31396051279005,0,0,0,0.167821586975843,0.189753732724185,0.635746315921515,0.210998064528027,0,0,0.216388639742091,0.995261931078505,0.176915129006678,0.611030144933625,0,0.123563938946503,0,0.337005664903385,0,0.468528891450678,0.182454789215666,0.19566461893209,0.485560759068186,0,0,0.61214552326098,0,0.901940516486955,0.414752765588989,0,0.661983911750998,0,0,0,0.138674673013139,0,0.0979923974143777,0.34823682632161,0,0.171986032471617,0,0.219267951258557,0,0.193978032976839,0.0882561266915003,0.225980740780532,0.274083849293502,0.19871461170299,0.253243183823515,0.5866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| |||
|short_description=p2@USP21 | |||
}} |
Latest revision as of 05:06, 18 September 2015
Short description: | p2@USP21 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_2_at_USP21_5end |
Coexpression cluster: | NA |
Association with transcript: | -3bp_to_ENST00000368002, NM_001014443, NM_012475, uc010pkc.1, uc010pkd.1, uc010pke.1, uc010pkf.1_5end |
EntrezGene: | USP21 |
HGNC: | 12620 |
UniProt: | Q9UK80 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
perirenal preadipocyte | 1.88e-21 | 1 |
endothelial cell of sinusoid | 2.73e-11 | 2 |
endothelial cell of hepatic sinusoid | 2.73e-11 | 2 |
mesangial cell | 4.09e-11 | 2 |
kidney interstitial cell | 4.09e-11 | 2 |
juxtaglomerular complex cell | 4.09e-11 | 2 |
renal interstitial pericyte | 4.09e-11 | 2 |
extraglomerular mesangial cell | 4.09e-11 | 2 |
kidney tubule cell | 6.28e-09 | 10 |
nephron tubule epithelial cell | 6.28e-09 | 10 |
duct epithelial cell | 7.26e-08 | 3 |
branched duct epithelial cell | 7.26e-08 | 3 |
tracheal epithelial cell | 7.26e-08 | 3 |
tracheoblast | 7.26e-08 | 3 |
nucleus pulposus cell of intervertebral disc | 8.29e-08 | 3 |
Ontology term | p-value | n |
---|---|---|
perirenal fat | 2.02e-11 | 2 |
hepatic sinusoid | 2.73e-11 | 2 |
abdomen blood vessel | 2.73e-11 | 2 |
sinusoid | 2.73e-11 | 2 |
abdominal segment blood vessel | 2.73e-11 | 2 |
abdomen connective tissue | 4.09e-11 | 2 |
abdominal segment connective tissue | 4.09e-11 | 2 |
trunk connective tissue | 4.09e-11 | 2 |
interstitial tissue | 4.09e-11 | 2 |
extraglomerular mesangium | 4.09e-11 | 2 |
kidney interstitium | 4.09e-11 | 2 |
juxtaglomerular apparatus | 4.09e-11 | 2 |
mesangium | 4.09e-11 | 2 |
nephron tubule epithelium | 6.28e-09 | 10 |
liver parenchyma | 5.93e-08 | 3 |
liver lobule | 5.93e-08 | 3 |
hepatic duct | 5.93e-08 | 3 |
nucleus pulposus | 8.29e-08 | 3 |
axial mesoderm | 8.29e-08 | 3 |
notochord | 8.29e-08 | 3 |
chordamesoderm | 8.29e-08 | 3 |