FFCP PHASE1:Hg19::chr1:44399451..44399461,+: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
(2 intermediate revisions by the same user not shown) | |||
Line 1: | Line 1: | ||
{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=9048 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=727 | |||
|TSSclassifier=strong | |||
|UniProt= | |||
|association_with_transcript=-22bp_to_ENST00000498139_5end | |||
|cluster_id=chr1:44399451..44399461,+ | |||
|coexpression_cluster_id=C226 | |||
|description=CAGE_peak_6_at_ARTN_5end | |||
|id=chr1:44399451..44399461,+ | |||
|ontology_enrichment_celltype=CL:0000066!1.71e-23!254;CL:0002076!3.97e-22!43;CL:0002368!2.20e-20!13;CL:0000223!4.09e-17!59;CL:0002159!3.99e-13!13;CL:0002202!8.85e-13!9;CL:0002632!8.85e-13!9;CL:0000076!5.28e-09!62;CL:0002251!1.32e-08!21;CL:0000221!1.90e-08!71;CL:0000068!2.96e-08!3;CL:0000069!2.96e-08!3;CL:0000307!2.96e-08!3;CL:0000377!2.96e-08!3;CL:0002328!3.25e-08!3;CL:0002321!6.64e-08!248;CL:0002621!1.10e-07!3;CL:0002077!2.75e-07!33;CL:0002166!3.12e-07!3;CL:0000220!4.61e-07!246;CL:0000128!5.09e-07!7;CL:0000126!5.09e-07!7;CL:0000127!5.09e-07!7;CL:0002453!5.09e-07!7;CL:0002605!6.24e-07!3 | |||
|ontology_enrichment_celltype_v019=CL:0002368;5.98e-36;13!CL:0002202;2.08e-32;9!CL:0002632;2.08e-32;9!CL:0002076;2.53e-23;42!CL:0002159;4.08e-20;14!CL:0000307;2.46e-19;3!CL:0002328;4.82e-19;3!CL:0000240;5.26e-16;6!CL:0000311;5.26e-16;6!CL:0000079;5.26e-16;6!CL:0000237;5.26e-16;6!CL:0002327;7.89e-14;4!CL:0000244;1.07e-13;4!CL:0000731;1.07e-13;4!CL:0000575;2.88e-13;2!CL:0000312;2.29e-11;5!CL:0000362;7.24e-11;9!CL:0002077;9.60e-11;34!CL:0002621;8.68e-09;3!CL:0002252;1.09e-07;1!CL:0000082;1.17e-07;19!CL:0002251;2.56e-07;20!CL:0002336;4.88e-07;1!CL:0002261;4.88e-07;1!CL:1001319;4.88e-07;1!CL:1000600;4.88e-07;1!CL:0002170;4.88e-07;1 | |||
|ontology_enrichment_celltype_v019_2=CL:0002368,2.98e-36,13;CL:0002202,1.14e-32,9;CL:0002632,1.14e-32,9;CL:0002076,4.92e-29,42;CL:0000066,2.28e-21,253;CL:0000223,3.69e-20,58;CL:0002159,4.87e-20,14;CL:0000068,2.55e-19,3;CL:0000069,2.55e-19,3;CL:0000307,2.55e-19,3;CL:0000377,2.55e-19,3;CL:0002328,3.25e-19,3;CL:0000240,7.78e-16,6;CL:0000311,7.78e-16,6;CL:0000079,7.78e-16,6;CL:0000237,7.78e-16,6;CL:0000036,7.78e-16,6;CL:0000357,7.78e-16,6;CL:0000114,7.78e-16,6;CL:0002327,6.63e-14,4;CL:0000244,1.03e-13,4;CL:0000731,1.03e-13,4;CL:0000575,3.25e-13,2;CL:0002077,1.31e-12,34;CL:0000312,2.74e-11,5;CL:0000362,7.44e-11,9;CL:0002621,9.40e-09,3;CL:0002321,1.05e-08,250;CL:0000076,9.55e-08,63;CL:0002252,1.06e-07,1;CL:0000082,1.07e-07,19;CL:0002251,2.78e-07,20;CL:1001319,6.20e-07,1;CL:1000600,6.20e-07,1;CL:0002336,6.57e-07,1;CL:0002261,6.57e-07,1;CL:0002170,6.57e-07,1 | |||
|ontology_enrichment_development_v019=CL:0000377;2.46e-19;3!CL:0000357;5.26e-16;6!CL:0000114;5.26e-16;6!CL:0000223;6.30e-12;58 | |||
|ontology_enrichment_disease=DOID:1749!8.61e-20!14;DOID:305!4.40e-10!106;DOID:0050687!9.85e-09!143;DOID:3908!5.84e-07!5 | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0001004!3.68e-11!72;UBERON:0003729!1.15e-10!5;UBERON:0007196!8.44e-10!14;UBERON:0001558!8.44e-10!14;UBERON:0005910!1.41e-09!6;UBERON:0004119!6.80e-09!169;UBERON:0000925!6.80e-09!169;UBERON:0006595!6.80e-09!169;UBERON:0003343!1.02e-08!4;UBERON:0004785!1.02e-08!4;UBERON:0005153!2.68e-08!37;UBERON:0005178!3.25e-08!34;UBERON:0002224!3.25e-08!34;UBERON:0004815!3.25e-08!3;UBERON:0002031!3.25e-08!3;UBERON:0005181!6.86e-08!35;UBERON:0000065!8.44e-08!53;UBERON:0000344!8.52e-08!12;UBERON:0000365!8.98e-08!5;UBERON:0001949!1.10e-07!3;UBERON:0004807!2.94e-07!28;UBERON:0005157!3.67e-07!51 | |||
|ontology_enrichment_uberon_v019=UBERON:0007196;4.15e-19;15!UBERON:0001558;4.15e-19;15!UBERON:0004815;4.82e-19;3!UBERON:0002031;4.82e-19;3!UBERON:0000365;9.31e-19;5!UBERON:0000486;5.99e-17;12!UBERON:0005910;1.14e-15;6!UBERON:0005911;1.41e-14;36!UBERON:0001911;7.89e-14;4!UBERON:0005178;7.28e-13;34!UBERON:0002224;7.28e-13;34!UBERON:0004807;2.29e-12;22!UBERON:0002185;1.23e-11;5!UBERON:0005181;4.02e-11;35!UBERON:0000065;7.65e-10;44!UBERON:0001949;8.68e-09;3!UBERON:0003126;1.46e-08;7!UBERON:0001005;1.46e-08;7!UBERON:0000485;1.93e-08;7!UBERON:0000072;3.18e-08;37!UBERON:0004802;1.17e-07;19!UBERON:0000115;1.17e-07;19!UBERON:0003729;1.80e-07;13!UBERON:0000997;2.22e-07;1!UBERON:0005056;2.22e-07;1!UBERON:0004176;2.22e-07;1!UBERON:0000344;3.58e-07;20!UBERON:0003350;4.36e-07;8!UBERON:0000964;4.75e-07;4!UBERON:0010409;4.75e-07;4!UBERON:0004645;4.88e-07;1!UBERON:0001256;4.88e-07;1!UBERON:0001259;4.88e-07;1 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0007196,2.91e-19,15;UBERON:0001558,2.91e-19,15;UBERON:0004815,3.25e-19,3;UBERON:0002031,3.25e-19,3;UBERON:0000365,1.07e-18,5;UBERON:0005910,1.29e-15,6;UBERON:0001911,6.63e-14,4;UBERON:0005333,6.63e-14,4;UBERON:0008425,6.63e-14,4;UBERON:0005311,6.63e-14,4;UBERON:0005157,2.72e-13,47;UBERON:0005178,4.95e-13,34;UBERON:0002224,4.95e-13,34;UBERON:0005181,1.29e-12,35;UBERON:0002185,9.74e-12,5;UBERON:0005153,1.53e-11,37;UBERON:0001004,4.64e-11,74;UBERON:0004119,1.64e-10,160;UBERON:0000925,1.64e-10,160;UBERON:0006595,1.64e-10,160;UBERON:0004807,1.48e-09,28;UBERON:0000065,2.49e-09,54;UBERON:0008947,4.85e-09,38;UBERON:0003258,4.85e-09,38;UBERON:0001949,9.40e-09,3;UBERON:0003126,1.48e-08,7;UBERON:0001005,1.48e-08,7;UBERON:0000915,5.31e-08,52;UBERON:0005911,5.33e-08,82;UBERON:0004802,1.07e-07,19;UBERON:0000115,1.07e-07,19;UBERON:0003102,1.73e-07,99;UBERON:0003729,2.01e-07,13;UBERON:0000997,2.52e-07,1;UBERON:0005056,2.52e-07,1;UBERON:0000076,3.45e-07,8;UBERON:0000344,4.13e-07,20;UBERON:0000072,4.41e-07,47;UBERON:0003350,4.96e-07,8;UBERON:0000964,5.05e-07,4;UBERON:0010409,5.05e-07,4;UBERON:0004348,5.05e-07,4;UBERON:0005427,5.05e-07,4;UBERON:0004645,6.20e-07,1;UBERON:0001256,6.20e-07,1;UBERON:0001259,6.20e-07,1 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.123121058076788,0.204000691244253,0,0.572471974262113,0.684372125364421,0.502170558379211,0,0,0,0,0,0,2.75826367343678,6.32532429434325,2.9580320813343,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.189069634328136,0,0,0,3.27865759463288,2.59549109949101,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,6.54141078213801,0,0,0,0,0,0,0,0,0,0,0,0.151357427644931,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.179389635688862,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.966304265816484,1.63647672354501,2.00763216772303,0.121973706129595,0.132529768321485,0,0,0,0,0,0.643240938192885,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.09750285408626,3.37205259772859,2.6137532827024,1.11106134190236,0,0,0,0,0,0,0,0,0,0,0,0,0,0.93733833986777,1.17587489739202,0.425325291727159,1.61205340865127,1.45316969256981,3.83382679165211,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.303127571446259,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.601519410909855,2.20994373446151,0,0,0,0,0.15403067420883,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.87132768998086,0,0,0,0,0,0,0,0,0,0,1.81813406897076,0.960950336825531,1.27612712494584,0.910420027699949,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.59799704358883,4.02181365321472,8.71127878890581,0,1.29151611801369,1.68471475667626,2.21715076768338,0,0,0,0,0,0,0,0,0,0,0,0.490080431962063,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.270455678475983,0,0,0,0,0,0,1.98895302764489,0,0,0,0,0,0,0,0,0,0,0,0,0,0.311039587661807,0,0,0,0,0,0,0,0,0,0,0,0,0.682760689712998,0,0,0,0.583209226766509,0,0,0.120596438625408,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.391329237864179,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.44980993535944,2.78589461057288,0,0,0,0,0,0,0,0,0,0,0,0.195551382734803,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.136905378891993,0,0,0,0,0,0,0,0,0,0.0671834724867263,0,0,0,0,0,0,0,0,0,0.160753148465019,0.687697182986169,0,0,0,0,0,0,0.104909176269996,0.105600336519406,1.07572403599707,0.383830394638891,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.197611631897944,0,0.638341257770182,0,0,0,0,0.628216385000937,0,0.122026264901963,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.231522474323834,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.245772908753719,0.211312123358627,0,0,0,0,0,1.95831310807222,1.24415452006595,0,0,0.157265941855896,0,0.509197589862076,0.850299680406731,0.247871528518004,0,0,0,0,0,0,0,0,0,0,0,0,0,0,4.90738592505128,0.11796972334774,0.733714394086716,0.231051332300676,0,0,0,0,0.20170506870352,0,0,0,0,0,0,0,0,0,0,0,0,0.638812138197976,0,0,0,0,0,0,0.171488009437418,0.203909198930495,0,0,0.111231401892069,0,0,0,0.913158720509496,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.198950775161368,0,0.11294608203896,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.892769693028288,0.705789743431384,0,0,0,0,0,0,0,0,0,0,0,0,0,0.760191006068622,0.203977659483963,0.26721740526556,0.0918948995348449,0,0,0,0,0.103432995861895,0,0,0,0,0,0,0,0,0,0,0,0.332660356546013,1.13964576055364,0.747091421144008,0,0,0,0,0,0,0,0 | |||
|short_description=p6@ARTN | |||
}} |
Latest revision as of 05:24, 18 September 2015
Short description: | p6@ARTN |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_6_at_ARTN_5end |
Coexpression cluster: | C226_Corneal_Keratinocyte_Esophageal_Urothelial_Mammary_Bronchial_Tracheal |
Association with transcript: | -22bp_to_ENST00000498139_5end |
EntrezGene: | ARTN |
HGNC: | 727 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data