FFCP PHASE1:Hg19::chr1:44584485..44584512,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=128209 | |EntrezGene=128209 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=18830 | |HGNC=18830 | ||
|TSSclassifier=strong | |||
|UniProt=Q5JT82 | |UniProt=Q5JT82 | ||
|association_with_transcript=-9bp_to_ENST00000372299,NM_173484,uc001clp.2_5end | |association_with_transcript=-9bp_to_ENST00000372299,NM_173484,uc001clp.2_5end | ||
|cluster_id=chr1:44584485..44584512,+ | |||
|coexpression_cluster_id=C128 | |||
|description=CAGE_peak_2_at_KLF17_5end | |description=CAGE_peak_2_at_KLF17_5end | ||
|id=chr1:44584485..44584512,+ | |id=chr1:44584485..44584512,+ | ||
|ontology_enrichment_celltype=CL:0000039!6.12e-51!7;CL:0000586!6.12e-51!7;CL:0002598!5.13e-23!1 | |ontology_enrichment_celltype=CL:0000039!6.12e-51!7;CL:0000586!6.12e-51!7;CL:0002598!5.13e-23!1 | ||
|ontology_enrichment_celltype_v019=CL:0000039;1.79e-75;7!CL:0000586;1.79e-75;7 | |||
|ontology_enrichment_celltype_v019_2=CL:0000039,1.79e-75,7;CL:0000586,1.79e-75,7 | |||
|ontology_enrichment_development_v019=UBERON:0009117;1.29e-117;10!UBERON:0005564;1.29e-117;10!UBERON:0006603;2.91e-10;65 | |||
|ontology_enrichment_disease=DOID:3095!1.33e-16!22;DOID:2994!1.33e-16!22 | |||
|ontology_enrichment_disease_v019=DOID:3095;1.34e-24;22!DOID:2994;1.34e-24;22 | |||
|ontology_enrichment_disease_v019_2=DOID:3095,1.34e-24,22;DOID:2994,1.34e-24,22 | |||
|ontology_enrichment_uberon=UBERON:0000473!1.03e-98!8;UBERON:0003135!6.52e-72!11;UBERON:0000991!7.97e-38!21;UBERON:0009196!7.97e-38!21;UBERON:0009117!7.97e-38!21;UBERON:0005564!7.97e-38!21;UBERON:0004176!4.06e-36!22;UBERON:0003101!4.06e-36!22;UBERON:0000079!4.06e-36!22;UBERON:0002323!2.33e-17!46;UBERON:0003133!1.22e-16!48;UBERON:0004458!2.67e-16!49;UBERON:0005156!1.51e-13!59;UBERON:0000990!1.51e-13!59;UBERON:0003886!1.09e-12!63;UBERON:0002553!2.03e-11!70;UBERON:0000464!2.67e-10!104;UBERON:0000466!1.82e-08!126;UBERON:0002185!9.63e-07!4 | |||
|ontology_enrichment_uberon_v019=UBERON:0000473;8.98e-147;8!UBERON:0003135;5.22e-107;11!UBERON:0000991;1.84e-56;21!UBERON:0003101;6.24e-54;22!UBERON:0000079;6.24e-54;22!UBERON:0002323;1.98e-21;45!UBERON:0003133;1.75e-19;44!UBERON:0002553;2.53e-14;52!UBERON:0005156;9.22e-12;59!UBERON:0000990;9.22e-12;59!UBERON:0004458;2.03e-11;48!UBERON:0000922;3.15e-09;49 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000473,8.98e-147,8;UBERON:0003135,5.22e-107,11;UBERON:0000991,1.84e-56,21;UBERON:0009196,1.84e-56,21;UBERON:0009117,1.84e-56,21;UBERON:0005564,1.84e-56,21;UBERON:0004176,6.24e-54,22;UBERON:0003101,6.24e-54,22;UBERON:0000079,6.24e-54,22;UBERON:0002323,3.74e-26,46;UBERON:0003133,4.34e-25,48;UBERON:0004458,1.37e-24,49;UBERON:0003886,2.29e-22,54;UBERON:0005156,1.61e-20,59;UBERON:0000990,1.61e-20,59;UBERON:0002553,7.27e-20,61;UBERON:0001048,7.94e-08,160 | |||
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|short_description=p2@KLF17 | |short_description=p2@KLF17 | ||
}} | }} |
Latest revision as of 05:53, 18 September 2015
Short description: | p2@KLF17 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_2_at_KLF17_5end |
Coexpression cluster: | C128_testicular_choriocarcinoma_H9_teratocarcinoma_pancreatic_iPS_HES3GFP |
Association with transcript: | -9bp_to_ENST00000372299, NM_173484, uc001clp.2_5end |
EntrezGene: | KLF17 |
HGNC: | 18830 |
UniProt: | Q5JT82 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
germ line cell | 1.79e-75 | 7 |
germ cell | 1.79e-75 | 7 |
Ontology term | p-value | n |
---|---|---|
testis | 8.98e-147 | 8 |
male reproductive organ | 5.22e-107 | 11 |
gonad | 1.84e-56 | 21 |
indifferent external genitalia | 1.84e-56 | 21 |
indifferent gonad | 1.84e-56 | 21 |
gonad primordium | 1.84e-56 | 21 |
external genitalia | 6.24e-54 | 22 |
male organism | 6.24e-54 | 22 |
male reproductive system | 6.24e-54 | 22 |
body cavity | 3.74e-26 | 46 |
reproductive organ | 4.34e-25 | 48 |
body cavity or lining | 1.37e-24 | 49 |
body cavity precursor | 2.29e-22 | 54 |
reproductive structure | 1.61e-20 | 59 |
reproductive system | 1.61e-20 | 59 |
anatomical cavity | 7.27e-20 | 61 |
primordium | 7.94e-08 | 160 |
Ontology term | p-value | n |
---|---|---|
germ cell and embryonal cancer | 1.34e-24 | 22 |
germ cell cancer | 1.34e-24 | 22 |