FFCP PHASE1:Hg19::chr10:43904608..43904640,-: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=3185 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=5039 | |||
|TSSclassifier=strong | |||
|UniProt=P52597,B4DKS8 | |||
|association_with_transcript=0bp_to_ENST00000337970,ENST00000540544_5end | |||
|cluster_id=chr10:43904608..43904640,- | |||
|description=CAGE_peak_1_at_HNRNPF_5end | |||
|id=chr10:43904608..43904640,- | |||
|ontology_enrichment_celltype=CL:0002032!1.42e-16!165;CL:0000837!1.42e-16!165;CL:0000037!1.14e-15!172;CL:0000566!1.14e-15!172;CL:0000988!2.57e-15!182;CL:0002031!3.26e-15!124;CL:0000003!1.60e-14!722;CL:0002087!2.70e-14!119;CL:0000063!1.01e-13!578;CL:0000012!4.39e-12!682;CL:0000548!7.22e-12!679;CL:0000004!7.22e-12!679;CL:0000255!7.22e-12!679;CL:0000738!1.49e-10!140;CL:0000763!4.17e-09!112;CL:0000049!4.17e-09!112;CL:0000860!7.33e-09!45;CL:0000542!4.23e-08!53;CL:0000051!4.23e-08!53;CL:0000839!4.79e-08!70;CL:0000838!6.25e-08!52;CL:0000557!8.64e-08!71;CL:0002009!9.06e-08!65;CL:0002194!9.69e-08!63;CL:0000576!9.69e-08!63;CL:0000040!9.69e-08!63;CL:0000559!9.69e-08!63;CL:0002057!1.71e-07!42;CL:0000219!2.06e-07!390;CL:0000144!2.53e-07!625;CL:0000945!3.00e-07!24;CL:0000826!3.00e-07!24;CL:0000134!4.15e-07!358;CL:0002320!8.89e-07!365 | |||
|ontology_enrichment_celltype_v019=CL:0000860;2.33e-07;33!CL:0002057;2.33e-07;33!CL:0000945;3.25e-07;24 | |||
|ontology_enrichment_celltype_v019_2=CL:0002032,8.63e-16,161;CL:0000837,8.63e-16,161;CL:0000037,6.66e-15,168;CL:0002031,1.93e-14,120;CL:0000988,2.07e-14,177;CL:0002087,1.56e-13,115;CL:0000738,6.99e-10,136;CL:0000763,1.89e-08,108;CL:0000049,1.89e-08,108;CL:0000542,4.23e-08,53;CL:0000051,4.23e-08,53;CL:0000473,4.86e-08,48;CL:0000234,4.86e-08,48;CL:0000838,6.25e-08,52;CL:0000860,1.71e-07,42;CL:0002057,1.71e-07,42;CL:0000839,2.30e-07,66;CL:0000945,3.00e-07,24;CL:0000826,3.00e-07,24;CL:0000557,4.06e-07,67;CL:0002009,4.35e-07,61;CL:0002194,4.68e-07,59;CL:0000576,4.68e-07,59;CL:0000040,4.68e-07,59;CL:0000559,4.68e-07,59 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease=DOID:2531!2.51e-11!51;DOID:0060083!2.51e-11!51;DOID:1240!1.51e-08!39;DOID:162!6.35e-08!235;DOID:14566!1.46e-07!239 | |||
|ontology_enrichment_disease_v019=DOID:2531;1.68e-07;51!DOID:0060083;1.68e-07;51!DOID:1240;2.39e-07;39 | |||
|ontology_enrichment_disease_v019_2=DOID:2531,2.51e-11,51;DOID:0060083,2.51e-11,51;DOID:1240,1.51e-08,39;DOID:162,6.35e-08,235;DOID:14566,1.46e-07,239 | |||
|ontology_enrichment_uberon=UBERON:0002390!3.31e-09!102;UBERON:0003061!3.31e-09!102;UBERON:0002193!3.63e-09!112;UBERON:0002405!1.38e-07!115;UBERON:0002371!1.43e-07!80;UBERON:0001474!7.74e-07!86 | |||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002390,1.55e-08,98;UBERON:0003061,1.55e-08,98;UBERON:0002193,1.65e-08,108;UBERON:0002405,3.51e-08,93;UBERON:0002371,6.40e-07,76 | |||
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| |||
|short_description=p1@HNRNPF | |||
}} |
Latest revision as of 06:18, 18 September 2015
Short description: | p1@HNRNPF |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_HNRNPF_5end |
Coexpression cluster: | NA |
Association with transcript: | 0bp_to_ENST00000337970, ENST00000540544_5end |
EntrezGene: | HNRNPF |
HGNC: | 5039 |
UniProt: | P52597B4DKS8 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
hematopoietic oligopotent progenitor cell | 8.63e-16 | 161 |
hematopoietic multipotent progenitor cell | 8.63e-16 | 161 |
hematopoietic stem cell | 6.66e-15 | 168 |
hematopoietic lineage restricted progenitor cell | 1.93e-14 | 120 |
hematopoietic cell | 2.07e-14 | 177 |
nongranular leukocyte | 1.56e-13 | 115 |
leukocyte | 6.99e-10 | 136 |
myeloid cell | 1.89e-08 | 108 |
common myeloid progenitor | 1.89e-08 | 108 |
lymphocyte | 4.23e-08 | 53 |
common lymphoid progenitor | 4.23e-08 | 53 |
defensive cell | 4.86e-08 | 48 |
phagocyte | 4.86e-08 | 48 |
lymphoid lineage restricted progenitor cell | 6.25e-08 | 52 |
classical monocyte | 1.71e-07 | 42 |
CD14-positive, CD16-negative classical monocyte | 1.71e-07 | 42 |
myeloid lineage restricted progenitor cell | 2.30e-07 | 66 |
lymphocyte of B lineage | 3.00e-07 | 24 |
pro-B cell | 3.00e-07 | 24 |
granulocyte monocyte progenitor cell | 4.06e-07 | 67 |
macrophage dendritic cell progenitor | 4.35e-07 | 61 |
monopoietic cell | 4.68e-07 | 59 |
monocyte | 4.68e-07 | 59 |
monoblast | 4.68e-07 | 59 |
promonocyte | 4.68e-07 | 59 |
Ontology term | p-value | n |
---|---|---|
hematopoietic system | 1.55e-08 | 98 |
blood island | 1.55e-08 | 98 |
hemolymphoid system | 1.65e-08 | 108 |
immune system | 3.51e-08 | 93 |
bone marrow | 6.40e-07 | 76 |
Ontology term | p-value | n |
---|---|---|
hematologic cancer | 2.51e-11 | 51 |
immune system cancer | 2.51e-11 | 51 |
leukemia | 1.51e-08 | 39 |
cancer | 6.35e-08 | 235 |
disease of cellular proliferation | 1.46e-07 | 239 |