FFCP PHASE1:Hg19::chr2:1748302..1748326,-: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=7837 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=14966 | |||
|TSSclassifier=strong | |||
|UniProt=Q92626 | |||
|association_with_transcript=-11bp_to_NM_012293,uc002qxa.2,uc002qxb.1,uc002qxc.1_5end | |||
|cluster_id=chr2:1748302..1748326,- | |||
|coexpression_cluster_id=C4144 | |||
|description=CAGE_peak_2_at_PXDN_5end | |||
|id=chr2:1748302..1748326,- | |||
|ontology_enrichment_celltype=CL:0000222!2.83e-31!119;CL:0000055!3.78e-31!180;CL:0002321!5.82e-21!248;CL:0000220!8.97e-21!246;CL:0000183!9.30e-18!59;CL:0000680!5.22e-17!57;CL:0000056!5.22e-17!57;CL:0000355!5.22e-17!57;CL:0000187!7.77e-16!54;CL:0000393!8.13e-15!60;CL:0000211!8.13e-15!60;CL:0000192!1.57e-14!42;CL:0000514!1.57e-14!42;CL:0000057!4.05e-14!75;CL:0002078!3.50e-13!44;CL:0000213!1.20e-12!57;CL:0000215!1.20e-12!57;CL:0000115!1.10e-11!35;CL:0000359!1.20e-11!32;CL:0002139!3.45e-11!24;CL:0000144!8.76e-09!625;CL:0000071!1.30e-07!18;CL:0002546!1.30e-07!18;CL:1000449!1.95e-07!16;CL:0002371!6.39e-07!591 | |||
|ontology_enrichment_celltype_v019=CL:0002139;3.06e-11;24!CL:0000359;4.93e-11;32!CL:0000192;1.48e-10;43!CL:0000115;1.98e-10;36!CL:0002078;1.69e-09;45!CL:0000187;5.18e-09;55!CL:0000213;4.11e-08;58!CL:0000215;4.11e-08;58!CL:0000393;9.92e-08;61!CL:0000211;9.92e-08;61!CL:0000071;1.26e-07;18!CL:1000449;1.93e-07;15 | |||
|ontology_enrichment_celltype_v019_2=CL:0000222,3.94e-32,121;CL:0002321,9.12e-22,250;CL:0000680,2.79e-17,58;CL:0000056,2.79e-17,58;CL:0000355,2.79e-17,58;CL:0000187,4.29e-16,55;CL:0000393,4.47e-15,61;CL:0000211,4.47e-15,61;CL:0000057,7.32e-15,76;CL:0000192,9.47e-15,43;CL:0000514,9.47e-15,43;CL:0002078,1.20e-13,45;CL:0000213,4.27e-13,58;CL:0000215,4.27e-13,58;CL:0000115,2.11e-12,36;CL:0000359,8.95e-12,32;CL:0002139,2.62e-11,24;CL:0000071,1.10e-07,18;CL:0002546,1.10e-07,18;CL:1000449,1.70e-07,15 | |||
|ontology_enrichment_development_v019=CL:0000514;1.48e-10;43!CL:0000355;2.90e-09;58!CL:0000222;3.84e-09;121!CL:0002546;1.26e-07;18 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002049!9.40e-28!79;UBERON:0007798!9.40e-28!79;UBERON:0000055!1.60e-23!69;UBERON:0004872!9.20e-23!84;UBERON:0001981!9.45e-20!60;UBERON:0007500!9.45e-20!60;UBERON:0004537!9.45e-20!60;UBERON:0006965!9.45e-20!60;UBERON:0004535!2.52e-19!110;UBERON:0003914!3.58e-19!118;UBERON:0001009!8.43e-19!113;UBERON:0000914!6.32e-17!83;UBERON:0002329!6.32e-17!83;UBERON:0003077!6.32e-17!83;UBERON:0003059!6.32e-17!83;UBERON:0007282!6.32e-17!83;UBERON:0009618!6.32e-17!83;UBERON:0007285!6.32e-17!83;UBERON:0001134!7.28e-17!61;UBERON:0002036!7.28e-17!61;UBERON:0003082!7.28e-17!61;UBERON:0005256!7.87e-17!143;UBERON:0002385!1.78e-16!63;UBERON:0001015!1.78e-16!63;UBERON:0000383!1.78e-16!63;UBERON:0004290!1.69e-15!70;UBERON:0000486!3.25e-15!82;UBERON:0000490!6.37e-15!138;UBERON:0000119!1.93e-14!312;UBERON:0000483!3.78e-14!309;UBERON:0001637!5.00e-14!42;UBERON:0003509!5.00e-14!42;UBERON:0004572!5.00e-14!42;UBERON:0000477!1.26e-13!286;UBERON:0000475!7.23e-13!365;UBERON:0002100!1.83e-11!216;UBERON:0004573!4.51e-11!33;UBERON:0004571!4.51e-11!33;UBERON:0000468!2.49e-10!659;UBERON:0004111!3.33e-10!241;UBERON:0000481!4.91e-10!347;UBERON:0003104!5.97e-08!238;UBERON:0009142!5.97e-08!238;UBERON:0001986!1.30e-07!18;UBERON:0004638!1.30e-07!18;UBERON:0004852!1.30e-07!18;UBERON:0000353!1.42e-07!17;UBERON:0000947!1.78e-07!21;UBERON:0010191!1.78e-07!21;UBERON:0004211!1.95e-07!16;UBERON:0001285!1.95e-07!16;UBERON:0007684!1.95e-07!16;UBERON:0003220!1.95e-07!16;UBERON:0004208!1.95e-07!16;UBERON:0000025!2.24e-07!194;UBERON:0006555!6.04e-07!17;UBERON:0005103!6.04e-07!17;UBERON:0000083!6.04e-07!17;UBERON:0009201!6.04e-07!17;UBERON:0004819!6.04e-07!17;UBERON:0006553!6.04e-07!17;UBERON:0003074!6.04e-07!17;UBERON:0003060!6.04e-07!17;UBERON:0006914!6.43e-07!25 | |||
|ontology_enrichment_uberon_v019=UBERON:0000055;4.00e-12;65!UBERON:0002049;4.61e-12;75!UBERON:0007798;4.61e-12;75!UBERON:0003914;1.98e-11;74!UBERON:0007500;3.66e-11;56!UBERON:0001981;3.66e-11;56!UBERON:0004537;3.66e-11;56!UBERON:0001637;1.24e-10;42!UBERON:0003509;1.24e-10;42!UBERON:0004572;1.24e-10;42!UBERON:0004573;2.06e-10;33!UBERON:0004571;2.06e-10;33!UBERON:0004638;1.26e-07;18!UBERON:0001986;1.26e-07;18!UBERON:0004852;1.26e-07;18!UBERON:0002385;1.49e-07;31!UBERON:0001015;1.49e-07;31!UBERON:0000383;1.49e-07;31!UBERON:0000947;1.66e-07;21!UBERON:0010191;1.66e-07;21!UBERON:0006555;1.93e-07;15!UBERON:0004819;1.93e-07;15!UBERON:0001285;1.93e-07;15!UBERON:0007684;1.93e-07;15!UBERON:0006914;5.11e-07;25!UBERON:0000353;5.25e-07;15 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002049,2.15e-27,78;UBERON:0007798,2.15e-27,78;UBERON:0000055,3.98e-23,68;UBERON:0004872,1.98e-22,83;UBERON:0003914,1.15e-19,117;UBERON:0007500,2.51e-19,59;UBERON:0001981,2.51e-19,59;UBERON:0004537,2.51e-19,59;UBERON:0006965,2.51e-19,59;UBERON:0004535,3.00e-19,109;UBERON:0007503,6.83e-19,78;UBERON:0001009,1.01e-18,112;UBERON:0001134,3.84e-17,62;UBERON:0002036,3.84e-17,62;UBERON:0003082,3.84e-17,62;UBERON:0002385,9.38e-17,64;UBERON:0001015,9.38e-17,64;UBERON:0000383,9.38e-17,64;UBERON:0003104,1.50e-16,160;UBERON:0009142,1.50e-16,160;UBERON:0007524,6.82e-16,73;UBERON:0002329,8.90e-16,71;UBERON:0003059,8.90e-16,71;UBERON:0007282,8.90e-16,71;UBERON:0004290,8.90e-16,71;UBERON:0009618,8.90e-16,71;UBERON:0000486,1.46e-15,83;UBERON:0003077,2.20e-15,72;UBERON:0007285,2.20e-15,72;UBERON:0000490,2.54e-15,148;UBERON:0001637,3.49e-14,42;UBERON:0003509,3.49e-14,42;UBERON:0004572,3.49e-14,42;UBERON:0000119,5.70e-14,309;UBERON:0000483,1.11e-13,306;UBERON:0005256,4.60e-13,122;UBERON:0004573,3.43e-11,33;UBERON:0004571,3.43e-11,33;UBERON:0002100,1.97e-10,199;UBERON:0004111,2.08e-09,240;UBERON:0004638,1.10e-07,18;UBERON:0001986,1.10e-07,18;UBERON:0004852,1.10e-07,18;UBERON:0000947,1.50e-07,21;UBERON:0010191,1.50e-07,21;UBERON:0004211,1.70e-07,15;UBERON:0009773,1.70e-07,15;UBERON:0001231,1.70e-07,15;UBERON:0001285,1.70e-07,15;UBERON:0007684,1.70e-07,15;UBERON:0004208,1.70e-07,15;UBERON:0006914,4.68e-07,25;UBERON:0006555,5.65e-07,16;UBERON:0004819,5.65e-07,16;UBERON:0000353,5.65e-07,15 | |||
|phase1_expression=29.7952542003713,28.2612691536098,32.5604673461693,27.0197905553452,21.9010936269371,20.9361245784089,17.7309914717817,15.1612769622439,20.3724789995874,19.6587149201207,11.8626198555313,51.3337224505905,41.1476486036388,30.3227564752114,36.4537113300707,34.2885824690405,29.5320318731749,42.3579852424676,42.9380862935646,9.35720041383588,28.5600967741954,23.5091041108566,11.7356754723733,13.5505680822155,19.4591091371944,0,0,0,0,0,1.39334510984468,6.43594857135249,10.2410012384605,3.69754010166788,0,0,2.93600439334847,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.605399502633369,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.382273228125229,2.64342657158052,1.12101712596307,1.31692042387539,0,0,0.411202997999018,0,0,0,0,0,0,0,0,0,0.130059347559878,0.164437904603676,1.10540007114339,0.579606171470105,0.593146252648242,0.267540828089713,1.04535523804977,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,9.75227465255847,25.4866326687382,28.7690764147943,28.5536930383807,30.0802746381534,34.6183180316369,32.6067238290951,28.7114573478555,37.7193920484631,37.9157269660984,51.9103583446375,3.1434978119451,11.2931539370688,7.41568885568859,0,0,0,0.953962497221368,2.28797964312051,0.371457501329565,33.1933220302397,30.9684454238205,15.6213225723417,6.78369530308812,57.890922196967,38.2414078296694,27.7963305493958,63.3121059964856,80.0474091045098,86.0231974805203,69.2866425427733,37.2533331802071,113.732918817447,23.8981002224815,70.4823494657131,40.5420766409722,37.9454639738227,35.5852278327298,32.1964938678355,27.5287041274757,53.8613127155397,0,0,18.3159501899864,45.7214195559693,31.7842584278095,37.3393889893277,57.6541607705116,29.4374757224636,25.7911696065461,48.0370480783672,36.5067971657397,40.1462235665699,31.7917186084464,25.3365949825861,37.0825697730082,35.7229073177599,30.4617861383936,13.7350433805341,8.55707732316674,14.3470733329729,8.6901528996386,5.98929894162087,5.89893388149444,12.8617127890583,23.4613546065477,15.0855640516618,39.2040942903078,34.8646370282765,11.8320977051943,23.7143986799359,14.3085696860956,21.1450298583619,15.5155904671142,14.9252391099485,19.9217067269363,44.9211796130724,22.9133009983242,41.0802265727494,35.8776413215193,26.2795557437857,45.3137555087447,18.0341926167268,19.0653999633766,24.939658748433,76.1181258408111,30.7900936309388,23.4763410047026,33.0459136125855,10.1837015795851,51.8314005074257,18.9413944667964,28.1470583235409,20.4856504353095,23.4561663708118,24.0915860126763,17.3202662704025,14.5782745153634,11.9679761155604,19.9029225629511,11.8590799911545,9.85438869504741,6.25798129319264,20.5837100221723,4.14404764057442,17.6459812652152,11.5500717067134,8.87301000298829,9.946496714608,7.95336398615491,7.94116603673236,9.80457498415828,9.96536600266606,9.70785418753184,6.47530834913642,6.15595451114225,83.4115663725853,85.547482020102,44.4499932237912,47.0427876433734,1.26755034821831,0,8.86184860022106,0,0,38.9458929377653,18.767298804875,6.74410519545717,3.71957197923034,14.166032109255,24.4356228982744,33.2779131289465,11.5465073620219,31.0693485333206,100.971477042807,73.3381554626255,49.0764643331207,54.7931958435643,3.95102198979638,5.15091697256924,0,0,0,5.62403003920662,21.3337302812552,15.3117105021777,6.35865511190223,6.1033127087932,19.935899316591,0,0,0.621984346622316,0,0,5.77830838058738,11.8416411923066,12.8939191931052,11.9750712215894,13.676056529542,8.40960561962969,6.28818151787272,15.3619585553144,18.3103228909978,15.6943931656833,63.8602275843422,39.3422090437071,14.370146793452,32.4444502233542,39.5228260263191,17.4901014498257,17.0218958427934,23.7115739324328,65.1979651081153,153.561914325778,52.6873815539692,15.6353368460993,63.2597668761732,29.3022192985369,21.100756394171,35.7328718026121,31.1915732488018,0,0,0,41.6947248555354,51.6878711253513,27.1010119577365,32.2862313868702,36.7802617365186,39.393411912777,0,0,0,0,7.87693335089637,10.4111883086097,3.09315525111078,5.86306928670221,7.01732626818479,0,0,0,41.1016497259119,36.5124480373564,22.7862619907778,54.0724239980099,55.8482734935116,53.145713866436,30.9253335580763,19.260550382574,25.0148254461583,22.7640756843511,32.5470543282364,34.4770345172985,24.7618301234036,24.8667469977681,23.6768962429491,0.206768026122887,0,0,12.7313580007429,39.9445054825193,47.4752760527598,30.5172603617096,51.2562990782129,47.9928761480556,30.1127000750897,32.2375566912023,56.6205802425498,22.2627099667486,14.1872918298443,21.6625304882015,14.9471423945133,27.5204847467319,10.2265133044764,0,24.0607764363942,5.89318329189736,45.9257792658427,33.8689572492494,46.5491673105956,39.7055659358522,25.9541686041878,29.8052912287205,42.3803751494456,32.7210049567915,64.8280289204111,41.3327703821933,50.3084084517985,165.02316037861,51.2088766957882,63.2129115057115,23.9583696662336,37.3984204017926,42.0884538877695,0,0,20.0031097590784,34.4415377984691,10.0867302345934,4.43076350085206,0,0,28.1390113618124,22.1020483652417,46.5983396548063,22.3309359254802,12.7860352205155,14.582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.38657065171,0,0,1.63127359144396,1.31545547125698,1.18193840883968,16.017321872458,6.98588526369575,1.09980912941201,0,35.6131900998703,0,7.16627531830575,5.14631118071926,10.2708847626272,0,18.9505516809812,68.9471773668017,13.8834829989235,6.99945756085195,8.2951159417691,0.860454717640555,6.03493203725883,2.98246916657052,2.54032230114557,23.8271143285812,4.6530957849648,1.91107787795487,3.46751838573156,0.098150233615243,0,1.94228651156368,2.87455859197492,37.1140618028224,43.7139893753226,0,0,11.1784885330914,2.59775988689608,0,0,1.92935395269862,19.4518008848522,0,17.4055308445273,0,1.76677620403451,1.18818560130834,7.6078030965012,56.7556563057308,5.07513157091209,18.4349559604431,0,4.99951028095841,0.705789743431384,2.08627553391837,13.8763913766838,1.37618785021362,0.860037498908708,39.1273474239098,1.49581278420012,21.8175345170189,10.580536810308,27.1556363261728,25.419659574728,20.3334484198181,0,8.74124575709564,0,6.01734095477692,10.1542614000913,8.36243585767089,5.76627340372463,2.95536923051134,2.41167717140561,3.31667775783512,0.620597975171371,2.77204176471275,27.1393451868664,3.93992349999637,3.97278171493491,9.97973576967459,1.59117895695412,12.5312657154096,1.30630048738177,19.507298161861,1.75115337837928,5.1639987882727,25.947507810589,0,0,75.2981900919066,0,23.4640942403454,4.64517487894893,41.5034101882053,6.65756774185513,5.23311863336668,0 | |||
|short_description=p2@PXDN | |||
}} |
Latest revision as of 06:43, 18 September 2015
Short description: | p2@PXDN |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_2_at_PXDN_5end |
Coexpression cluster: | C4144_Mesenchymal_Smooth_Renal_hepatic_Lens_epithelioid_Endothelial |
Association with transcript: | -11bp_to_NM_012293, uc002qxa.2, uc002qxb.1, uc002qxc.1_5end |
EntrezGene: | PXDN |
HGNC: | 14966 |
UniProt: | Q92626 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
mesodermal cell | 3.94e-32 | 121 |
embryonic cell | 9.12e-22 | 250 |
muscle precursor cell | 2.79e-17 | 58 |
myoblast | 2.79e-17 | 58 |
multi-potent skeletal muscle stem cell | 2.79e-17 | 58 |
muscle cell | 4.29e-16 | 55 |
electrically responsive cell | 4.47e-15 | 61 |
electrically active cell | 4.47e-15 | 61 |
fibroblast | 7.32e-15 | 76 |
smooth muscle cell | 9.47e-15 | 43 |
smooth muscle myoblast | 9.47e-15 | 43 |
meso-epithelial cell | 1.20e-13 | 45 |
lining cell | 4.27e-13 | 58 |
barrier cell | 4.27e-13 | 58 |
endothelial cell | 2.11e-12 | 36 |
vascular associated smooth muscle cell | 8.95e-12 | 32 |
endothelial cell of vascular tree | 2.62e-11 | 24 |
blood vessel endothelial cell | 1.10e-07 | 18 |
embryonic blood vessel endothelial progenitor cell | 1.10e-07 | 18 |
epithelial cell of nephron | 1.70e-07 | 15 |