FFCP PHASE1:Hg19::chr9:95268750..95268762,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=1842 | |EntrezGene=1842 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=3154 | |HGNC=3154 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=-19bp_to_uc010mqz.1_5end | |association_with_transcript=-19bp_to_uc010mqz.1_5end | ||
|cluster_id=chr9:95268750..95268762,- | |||
|description=CAGE_peak_9_at_ECM2_5end | |description=CAGE_peak_9_at_ECM2_5end | ||
|id=chr9:95268750..95268762,- | |id=chr9:95268750..95268762,- | ||
|ontology_enrichment_celltype=CL:0002620!1.84e-08!23;CL:0000057!5.00e-08!75;CL:0000197!6.61e-07!6;CL:0000098!6.61e-07!6;CL:0002167!6.61e-07!6 | |ontology_enrichment_celltype=CL:0002620!1.84e-08!23;CL:0000057!5.00e-08!75;CL:0000197!6.61e-07!6;CL:0000098!6.61e-07!6;CL:0002167!6.61e-07!6 | ||
|ontology_enrichment_celltype_v019=CL:0002552;5.39e-08;5!CL:0000077;1.95e-07;19 | |ontology_enrichment_celltype_v019=CL:0002552;5.39e-08;5!CL:0000077;1.95e-07;19 | ||
|ontology_enrichment_celltype_v019_2=CL:0002552,6.77e-08,5;CL:0000077,2.12e-07,19 | |||
|ontology_enrichment_development_v019=UBERON:0005425;6.05e-10;1 | |ontology_enrichment_development_v019=UBERON:0005425;6.05e-10;1 | ||
|ontology_enrichment_disease=DOID:1749!5.30e-08!14 | |ontology_enrichment_disease=DOID:1749!5.30e-08!14 | ||
|ontology_enrichment_disease_v019=DOID:3112;6.05e-10;1!DOID:4362;3.87e-08;5 | |ontology_enrichment_disease_v019=DOID:3112;6.05e-10;1!DOID:4362;3.87e-08;5 | ||
|ontology_enrichment_disease_v019_2=DOID:3112,3.71e-10,1;DOID:4362,4.15e-08,5 | |||
|ontology_enrichment_uberon=UBERON:0003102!3.74e-07!95 | |ontology_enrichment_uberon=UBERON:0003102!3.74e-07!95 | ||
|ontology_enrichment_uberon_v019=UBERON:0000997;2.59e-10;1!UBERON:0005056;2.59e-10;1!UBERON:0004176;2.59e-10;1!UBERON:0000941;6.05e-10;1!UBERON:0001785;6.05e-10;1!UBERON:0002464;6.05e-10;1!UBERON:0004904;6.05e-10;1!UBERON:0001021;6.05e-10;1!UBERON:0000002;6.45e-07;6!UBERON:0001560;6.45e-07;6 | |ontology_enrichment_uberon_v019=UBERON:0000997;2.59e-10;1!UBERON:0005056;2.59e-10;1!UBERON:0004176;2.59e-10;1!UBERON:0000941;6.05e-10;1!UBERON:0001785;6.05e-10;1!UBERON:0002464;6.05e-10;1!UBERON:0004904;6.05e-10;1!UBERON:0001021;6.05e-10;1!UBERON:0000002;6.45e-07;6!UBERON:0001560;6.45e-07;6 | ||
|ontology_enrichment_uberon_v019_2=UBERON:0000997,2.37e-10,1;UBERON:0005056,2.37e-10,1;UBERON:0000941,6.91e-10,1;UBERON:0001785,6.91e-10,1;UBERON:0002464,6.91e-10,1;UBERON:0004904,6.91e-10,1;UBERON:0001021,6.91e-10,1;UBERON:0003902,6.91e-10,1;UBERON:0005425,6.91e-10,1;UBERON:0000002,6.85e-07,6;UBERON:0001560,6.85e-07,6 | |||
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| ||
|short_description=p9@ECM2 | |short_description=p9@ECM2 | ||
}} | }} |
Latest revision as of 07:26, 18 September 2015
Short description: | p9@ECM2 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_9_at_ECM2_5end |
Coexpression cluster: | NA |
Association with transcript: | -19bp_to_uc010mqz.1_5end |
EntrezGene: | ECM2 |
HGNC: | 3154 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
fibroblast of gingiva | 6.77e-08 | 5 |
mesothelial cell | 2.12e-07 | 19 |
Ontology term | p-value | n |
---|---|---|
mammalian vulva | 2.37e-10 | 1 |
external female genitalia | 2.37e-10 | 1 |
cranial nerve II | 6.91e-10 | 1 |
cranial nerve | 6.91e-10 | 1 |
nerve trunk | 6.91e-10 | 1 |
nerve connecting eye with brain | 6.91e-10 | 1 |
nerve | 6.91e-10 | 1 |
retinal neural layer | 6.91e-10 | 1 |
presumptive neural retina | 6.91e-10 | 1 |
uterine cervix | 6.85e-07 | 6 |
neck of organ | 6.85e-07 | 6 |
Ontology term | p-value | n |
---|---|---|
papillary adenocarcinoma | 3.71e-10 | 1 |
cervical cancer | 4.15e-08 | 5 |