FFCP PHASE1:Hg19::chr10:47740297..47740299,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene= | |EntrezGene= | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_ncRNA | |||
|HGNC=23591 | |HGNC=23591 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=-30bp_to_ENST00000399377_5end | |association_with_transcript=-30bp_to_ENST00000399377_5end | ||
|cluster_id=chr10:47740297..47740299,+ | |||
|coexpression_cluster_id=C202 | |||
|description=CAGE_peak_1_at_FAM25HP_5end | |description=CAGE_peak_1_at_FAM25HP_5end | ||
|id=chr10:47740297..47740299,+ | |id=chr10:47740297..47740299,+ | ||
|ontology_enrichment_celltype=CL:0000622!1.60e-23!5;CL:0000154!1.47e-19!6;CL:0002623!9.72e-15!3;CL:0002621!4.70e-14!3;CL:0000150!6.12e-13!9;CL:0002251!1.78e-12!21;CL:0002159!3.27e-12!13;CL:0000317!1.53e-10!2;CL:1000448!1.53e-10!2;CL:0002308!1.53e-10!2;CL:0002140!1.53e-10!2;CL:0002076!2.07e-10!43;CL:0000575!3.06e-10!2;CL:0000362!2.16e-09!8;CL:0000223!1.90e-08!59;CL:0000066!4.44e-08!254;CL:0000076!1.02e-07!62 | |ontology_enrichment_celltype=CL:0000622!1.60e-23!5;CL:0000154!1.47e-19!6;CL:0002623!9.72e-15!3;CL:0002621!4.70e-14!3;CL:0000150!6.12e-13!9;CL:0002251!1.78e-12!21;CL:0002159!3.27e-12!13;CL:0000317!1.53e-10!2;CL:1000448!1.53e-10!2;CL:0002308!1.53e-10!2;CL:0002140!1.53e-10!2;CL:0002076!2.07e-10!43;CL:0000575!3.06e-10!2;CL:0000362!2.16e-09!8;CL:0000223!1.90e-08!59;CL:0000066!4.44e-08!254;CL:0000076!1.02e-07!62 | ||
|ontology_enrichment_celltype_v019=CL:0000622;4.43e-70;5!CL:0000154;1.57e-58;6!CL:0000317;2.39e-44;2!CL:1000448;2.39e-44;2!CL:0002308;2.39e-44;2!CL:0002140;2.39e-44;2!CL:0000150;2.94e-39;9!CL:0002623;2.30e-30;3!CL:0002159;1.74e-25;14!CL:0000362;1.40e-22;9!CL:0000575;1.96e-12;2!CL:0002077;1.10e-10;34!CL:0000151;3.44e-10;36 | |||
|ontology_enrichment_celltype_v019_2=CL:0000622,5.29e-70,5;CL:0000154,1.82e-58,6;CL:0000317,1.91e-44,2;CL:1000448,1.91e-44,2;CL:0002308,1.91e-44,2;CL:0002140,1.91e-44,2;CL:0000150,3.25e-39,9;CL:0002623,3.10e-30,3;CL:0002159,1.63e-25,14;CL:0000362,1.35e-22,9;CL:0000575,1.85e-12,2;CL:0002077,8.82e-11,34;CL:0000151,3.59e-10,36 | |||
|ontology_enrichment_development_v019=UBERON:0008814;1.65e-12;2!UBERON:0010056;1.65e-12;2 | |||
|ontology_enrichment_disease=DOID:1749!2.70e-07!14 | |ontology_enrichment_disease=DOID:1749!2.70e-07!14 | ||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000166!8.44e-24!21;UBERON:0000161!8.75e-19!35;UBERON:0000165!2.81e-17!28;UBERON:0000930!2.81e-17!28;UBERON:0003102!7.89e-16!95;UBERON:0001949!4.70e-14!3;UBERON:0001723!5.38e-14!3;UBERON:0001033!5.38e-14!3;UBERON:0010056!5.38e-14!3;UBERON:0001444!4.50e-13!48;UBERON:0000078!1.73e-11!18;UBERON:0002419!1.53e-10!2;UBERON:0007771!1.53e-10!2;UBERON:0003297!1.53e-10!2;UBERON:0001821!1.53e-10!2;UBERON:0003487!1.53e-10!2;UBERON:0001820!1.53e-10!2;UBERON:0005089!1.53e-10!2;UBERON:0005088!1.53e-10!2;UBERON:0001004!4.86e-09!72;UBERON:0001044!1.41e-07!6;UBERON:0003293!1.41e-07!6;UBERON:0003294!1.41e-07!6;UBERON:0010047!1.41e-07!6;UBERON:0000167!1.41e-07!6;UBERON:0004119!1.69e-07!169;UBERON:0000925!1.69e-07!169;UBERON:0006595!1.69e-07!169;UBERON:0001042!2.73e-07!10;UBERON:0009145!2.73e-07!10;UBERON:0000002!7.52e-07!6;UBERON:0001560!7.52e-07!6 | |||
|ontology_enrichment_uberon_v019=UBERON:0002419;2.39e-44;2!UBERON:0007771;2.39e-44;2!UBERON:0003297;2.39e-44;2!UBERON:0001821;2.39e-44;2!UBERON:0003487;2.39e-44;2!UBERON:0001820;2.39e-44;2!UBERON:0001044;9.74e-16;6!UBERON:0003293;9.74e-16;6!UBERON:0003294;9.74e-16;6!UBERON:0010047;9.74e-16;6!UBERON:0003408;9.74e-16;6!UBERON:0000167;9.74e-16;6!UBERON:0001003;7.51e-14;15!UBERON:0007376;7.51e-14;15!UBERON:0002365;3.86e-12;31!UBERON:0002330;3.86e-12;31!UBERON:0001723;8.96e-09;3!UBERON:0001033;8.96e-09;3!UBERON:0000165;8.59e-08;28!UBERON:0001041;2.77e-07;14!UBERON:0010371;6.76e-07;31!UBERON:0003102;7.36e-07;50!UBERON:0000964;7.48e-07;4!UBERON:0010409;7.48e-07;4 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002419,1.91e-44,2;UBERON:0007771,1.91e-44,2;UBERON:0003297,1.91e-44,2;UBERON:0001821,1.91e-44,2;UBERON:0003487,1.91e-44,2;UBERON:0001820,1.91e-44,2;UBERON:0005089,1.91e-44,2;UBERON:0005088,1.91e-44,2;UBERON:0001044,1.13e-15,6;UBERON:0003293,1.13e-15,6;UBERON:0003294,1.13e-15,6;UBERON:0010047,1.13e-15,6;UBERON:0000167,1.13e-15,6;UBERON:0001003,7.35e-14,15;UBERON:0007376,7.35e-14,15;UBERON:0007383,7.35e-14,15;UBERON:0002365,9.49e-12,31;UBERON:0002330,9.49e-12,31;UBERON:0003102,8.29e-11,99;UBERON:0003408,8.46e-10,10;UBERON:0000166,9.98e-10,22;UBERON:0001723,8.96e-09,3;UBERON:0001033,8.96e-09,3;UBERON:0010056,8.96e-09,3;UBERON:0004121,6.98e-08,171;UBERON:0000924,6.98e-08,171;UBERON:0006601,6.98e-08,171;UBERON:0001444,1.26e-07,49;UBERON:0000165,1.59e-07,29;UBERON:0000930,1.59e-07,29;UBERON:0005085,4.87e-07,31;UBERON:0000964,7.27e-07,4;UBERON:0010409,7.27e-07,4;UBERON:0004348,7.27e-07,4;UBERON:0005427,7.27e-07,4 | |||
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| ||
|short_description=p1@FAM25HP | |short_description=p1@FAM25HP | ||
}} | }} |
Latest revision as of 08:06, 18 September 2015
Short description: | p1@FAM25HP |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_FAM25HP_5end |
Coexpression cluster: | C202_salivary_skin_penis_tongue_uterus_cervical_immature |
Association with transcript: | -30bp_to_ENST00000399377_5end |
EntrezGene: | NA |
HGNC: | 23591 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
acinar cell | 5.29e-70 | 5 |
protein secreting cell | 1.82e-58 | 6 |
sebum secreting cell | 1.91e-44 | 2 |
epithelial cell of sweat gland | 1.91e-44 | 2 |
epithelial cell of skin gland | 1.91e-44 | 2 |
acinar cell of sebaceous gland | 1.91e-44 | 2 |
glandular epithelial cell | 3.25e-39 | 9 |
acinar cell of salivary gland | 3.10e-30 | 3 |
general ecto-epithelial cell | 1.63e-25 | 14 |
epidermal cell | 1.35e-22 | 9 |
corneal epithelial cell | 1.85e-12 | 2 |
ecto-epithelial cell | 8.82e-11 | 34 |
secretory cell | 3.59e-10 | 36 |
Ontology term | p-value | n |
---|---|---|
skin gland | 1.91e-44 | 2 |
epidermis gland | 1.91e-44 | 2 |
gland of integumental system | 1.91e-44 | 2 |
sebaceous gland | 1.91e-44 | 2 |
skin sebaceous gland | 1.91e-44 | 2 |
sweat gland | 1.91e-44 | 2 |
sweat gland placode | 1.91e-44 | 2 |
sebaceous gland placode | 1.91e-44 | 2 |
saliva-secreting gland | 1.13e-15 | 6 |
gland of oral region | 1.13e-15 | 6 |
gland of foregut | 1.13e-15 | 6 |
oral gland | 1.13e-15 | 6 |
oral cavity | 1.13e-15 | 6 |
skin epidermis | 7.35e-14 | 15 |
outer epithelium | 7.35e-14 | 15 |
enveloping layer of ectoderm | 7.35e-14 | 15 |
exocrine gland | 9.49e-12 | 31 |
exocrine system | 9.49e-12 | 31 |
surface structure | 8.29e-11 | 99 |
gland of gut | 8.46e-10 | 10 |
oral opening | 9.98e-10 | 22 |
tongue | 8.96e-09 | 3 |
gustatory system | 8.96e-09 | 3 |
future tongue | 8.96e-09 | 3 |
ectoderm-derived structure | 6.98e-08 | 171 |
ectoderm | 6.98e-08 | 171 |
presumptive ectoderm | 6.98e-08 | 171 |
subdivision of head | 1.26e-07 | 49 |
mouth | 1.59e-07 | 29 |
stomodeum | 1.59e-07 | 29 |
ectodermal placode | 4.87e-07 | 31 |
cornea | 7.27e-07 | 4 |
eye surface | 7.27e-07 | 4 |
optic eminence | 7.27e-07 | 4 |
corneal primordium | 7.27e-07 | 4 |