FFCP PHASE1:Hg19::chr16:88752889..88752921,-: Difference between revisions
From FANTOM5_SSTAR
m (moved FFCP PHASE1 hg19::chr16:88752889..88752921,- to FFCP PHASE1:Hg19::chr16:88752889..88752921,-: NSchange) |
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(9 intermediate revisions by the same user not shown) | |||
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=333929 | |EntrezGene=333929 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=18411 | |HGNC=18411 | ||
|TSSclassifier=strong | |||
|UniProt=Q3KNW1 | |UniProt=Q3KNW1 | ||
|association_with_transcript=-7bp_to_ENST00000332281,NM_178310,uc002flj.2_5end | |||
|cluster_id=chr16:88752889..88752921,- | |||
|description=CAGE_peak_1_at_SNAI3_5end | |||
|id=chr16:88752889..88752921,- | |||
|ontology_enrichment_celltype=CL:0000037!8.99e-53!172;CL:0000566!8.99e-53!172;CL:0002032!1.39e-50!165;CL:0000837!1.39e-50!165;CL:0000738!1.22e-48!140;CL:0000988!2.01e-48!182;CL:0002031!9.95e-40!124;CL:0002087!3.51e-39!119;CL:0000763!1.63e-30!112;CL:0000049!1.63e-30!112;CL:0000766!3.53e-26!76;CL:0000557!2.71e-21!71;CL:0000839!1.38e-20!70;CL:0002009!6.10e-20!65;CL:0002194!2.81e-19!63;CL:0000576!2.81e-19!63;CL:0000040!2.81e-19!63;CL:0000559!2.81e-19!63;CL:0000838!1.18e-17!52;CL:0000542!1.20e-17!53;CL:0000051!1.20e-17!53;CL:0002057!1.43e-15!42;CL:0000860!1.20e-13!45;CL:0000791!4.10e-11!18;CL:0000789!4.10e-11!18;CL:0002420!4.10e-11!18;CL:0002419!4.10e-11!18;CL:0000790!4.10e-11!18;CL:0000945!5.86e-09!24;CL:0000826!5.86e-09!24;CL:0000084!1.87e-08!25;CL:0000827!1.87e-08!25;CL:0000625!2.62e-08!11 | |||
|ontology_enrichment_celltype_v019=CL:0000473;1.28e-15;39!CL:0000234;1.28e-15;39!CL:0000791;6.66e-15;18!CL:0000789;6.66e-15;18!CL:0002419;6.66e-15;18!CL:0000766;1.00e-14;69!CL:0000576;3.39e-14;48!CL:0000860;2.10e-13;33!CL:0002057;2.10e-13;33!CL:0000738;8.76e-13;136!CL:0002087;1.03e-12;104!CL:0000625;9.88e-12;11!CL:0000763;6.27e-11;100!CL:0000542;6.60e-11;53!CL:0000084;3.27e-10;25!CL:0000988;2.26e-09;177!CL:0000094;5.36e-09;8!CL:0000945;1.36e-08;24 | |||
|ontology_enrichment_celltype_v019_2=CL:0000738,2.40e-64,136;CL:0000037,2.00e-63,168;CL:0002032,1.18e-60,161;CL:0000837,1.18e-60,161;CL:0000988,6.08e-58,177;CL:0002031,2.18e-52,120;CL:0002087,5.08e-51,115;CL:0000766,1.03e-38,72;CL:0000763,4.69e-38,108;CL:0000049,4.69e-38,108;CL:0000557,1.28e-31,67;CL:0000839,7.59e-30,66;CL:0002009,3.37e-29,61;CL:0002194,3.37e-28,59;CL:0000576,3.37e-28,59;CL:0000040,3.37e-28,59;CL:0000559,3.37e-28,59;CL:0000473,2.99e-22,48;CL:0000234,2.99e-22,48;CL:0000838,4.97e-20,52;CL:0000542,2.21e-19,53;CL:0000051,2.21e-19,53;CL:0000860,8.07e-18,42;CL:0002057,8.07e-18,42;CL:0000791,6.22e-15,18;CL:0000789,6.22e-15,18;CL:0002420,6.22e-15,18;CL:0002419,6.22e-15,18;CL:0000790,6.22e-15,18;CL:0000625,9.94e-12,11;CL:0000134,2.50e-10,354;CL:0000084,2.69e-10,25;CL:0000827,2.69e-10,25;CL:0002320,1.61e-09,361;CL:0000094,5.68e-09,8;CL:0000945,7.81e-09,24;CL:0000826,7.81e-09,24;CL:0000219,1.04e-08,386 | |||
|ontology_enrichment_development_v019=CL:0000790;6.66e-15;18!CL:0002057;1.34e-13;42!CL:0000051;6.60e-11;53!CL:0000049;3.43e-10;108 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002390!3.82e-26!102;UBERON:0003061!3.82e-26!102;UBERON:0002193!8.41e-23!112;UBERON:0002371!3.05e-18!80;UBERON:0001474!7.83e-16!86;UBERON:0007023!2.18e-12!115;UBERON:0002405!3.81e-12!115;UBERON:0004765!1.19e-11!101;UBERON:0001434!1.19e-11!101;UBERON:0000178!6.38e-07!15;UBERON:0000179!6.38e-07!15;UBERON:0000463!6.38e-07!15 | |||
|ontology_enrichment_uberon_v019=UBERON:0000178;5.47e-10;15!UBERON:0000179;5.47e-10;15!UBERON:0000463;5.47e-10;15 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002390,9.30e-38,98;UBERON:0003061,9.30e-38,98;UBERON:0002193,3.59e-34,108;UBERON:0002371,5.26e-27,76;UBERON:0002405,1.51e-25,93;UBERON:0001474,1.44e-23,82;UBERON:0004765,9.45e-20,90;UBERON:0001434,6.36e-16,100;UBERON:0000178,5.03e-10,15;UBERON:0000179,5.03e-10,15;UBERON:0000463,5.03e-10,15;UBERON:0003081,5.13e-10,203;UBERON:0002384,1.92e-08,371 | |||
|phase1_expression=0,0,0,0,0,0.872338524100369,0,0,0.261185628199839,0,0.697801167972428,0,0.263766978228454,0.123766352960047,0,0,0,0,0,0,0.204000691244253,0,0,0.136874425072884,0.125542639594803,2.06316195519468,1.72411237844886,1.81034797021462,4.32700704533794,3.45446458287491,3.2511385896376,0,0.30120591877825,0,2.71135202031056,0.426507697462265,0.587200878669695,2.76997704265939,5.61524452916397,3.68918480216948,6.04571780447796,5.18229865630367,7.21211589375722,5.81592955118259,6.04601509902095,3.63876091781724,2.78914844286822,1.23350366406548,1.54853185447552,0.863077176966451,3.07392847834921,1.41889337933151,2.41321976515633,3.22742341791913,2.70852973188684,3.01187743268168,1.63743690034707,1.79778787556068,1.22433556948361,1.28371610830437,1.27867425159808,2.30895910130701,2.59302754908121,0.426224750532694,2.03146467040009,0.56738522469114,1.24564449799115,1.7587406567972,2.60741459210101,1.52032191293582,1.21079900526674,1.84138817993782,0.632924774881769,2.32380814943136,2.55125159958052,4.82214884669265,14.2657361556049,9.76149803469791,9.16135844173357,1.42506371870624,0.39783335439818,0.730656615058536,5.27988733383968,2.73069305631066,8.00558328477199,2.98711155796555,6.4063357925762,4.02326707968138,5.94940385506376,2.86216126360609,2.84606484554724,1.17447437874188,0.382273228125229,0,0.560508562981536,0.790152254325231,3.93419540227666,4.32311839024081,3.70082698199117,24.910787813211,1.30368906653436,4.73447805734733,1.94826728407911,13.8148966537615,7.65975359434577,12.84896588585,9.74893909554056,18.1889674010459,20.1591988717811,9.20852265780586,6.63240042686036,12.4615326866073,2.81744470007915,2.40786745280742,5.22677619024884,14.0503584944982,6.51474839123266,10.6524508099615,8.8556892206826,13.6983128159362,9.76625180784628,2.85135613334512,12.9494602406885,9.7269824477358,13.742379920758,9.23431282971666,9.85353596305256,3.02410114837099,4.01160293675261,5.06885413589796,0,0,0,0,0,0,0,0,0.0945348171640679,0,0.087834785693126,1.57174890597255,0,0.370784442784429,5.19275829847493,3.83085422058388,6.51494006542439,2.62339686735876,3.43196946468077,1.85728750664782,0.39752481473341,0.860234595106124,0.347140501607594,0,0,0.550236083880135,0.417989933073621,0,0,0,0,1.52054421143703,0,0,0,0.0892997282840798,0.22452937262617,0,0,0.949265659568129,0.549605231791222,18.4492584410489,15.511210565933,0.872188104285069,0,0,0,0,0,0.560677600142307,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.122834317311768,0,0,0,0,0,0,0.250237039743928,0,0.438977620880838,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.169560592310488,0.193260853163297,0,0.286804595389004,1.95157929807353,0.795178609928912,1.2781333715647,1.7622379352613,0.504641701751257,1.09493207722749,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.18157981336281,0,1.10689594688802,0,0.329250856225877,0,0.100528972411631,0.185176890317059,0.325808305310325,0,1.44331342025273,0.34779121492523,0.117408694235822,0,0.925971025153221,0,0.790204397959275,2.57545848628462,3.44703808522356,6.55211942389866,4.60756603095058,0,0,0,0,0.290633938513962,0.766765358330422,1.47798971368783,10.2136183455342,1.86595303986695,1.29707958075265,5.6809095041871,0.063497894292169,0,0,0,0,0.600686115687835,0,0,0,0,0.258543431515556,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,4.86495122564762,2.00902836572851,4.21667878966063,0,0,0,0,0,0,0.560425719967636,3.15249216323084,4.09692392233083,6.93052395910641,0,0,0,0.167516265334349,0,7.49007023947182,8.97484377612075,9.11714129559278,0,0,0.271265023699736,0,0,0,0,0,0,0,0,0,0.0868836144680828,0.195801157462741,0.343143423810856,5.78950473144085,2.80428461064202,4.05564719653088,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.362578348774867,0.601519410909855,0.0920809889358963,0,0,0,0.902399225814824,0.616122696835318,0,0,0.633309773357254,0,0.170093705276516,0.431831832204279,0,0.270946437543853,0,0.254876273045038,0,0.447749509444357,0.438519753291869,0,0.256450125116389,0,0,0.9273691048295,0,0.082509499920588,0.574265537996172,0,0,0.096670718292122,0.154048617114644,0.15350367472613,0,0,0.145016693914229,0.170453254832202,0.178064071293475,0.165284915360978,0.384380134730212,0.127612712494584,0.708104465988849,0,0,0,0.308033580176089,0.532306030317022,0,0,0,0,0,0,0,0,0,0,0,0,0,0.202182481573316,0,0,0,0,1.05650146756755,0,0,0,0,0,0,0,0.655894752046633,0,1.239293992399,0.281695602532241,0,0.0982490410131212,0,0.354761064070598,0.422215270595328,0,0,0.349934720244983,0,0.670302275535787,0,0.564862804660675,0,0,0,0,18.7755615415903,17.5866557642746,15.3804740537024,14.2939065274673,11.9295059194996,18.1572527133961,11.3406601820004,23.7937552888281,0.427296284509893,0,1.22520107990516,0.557409525377156,0.432807638929335,0,0.318852545457645,1.39705560002972,2.8725805519855,0.846694330895531,0.649243880549111,0.842391534340376,3.42352018549788,0.156679895773023,0,4.57087800064329,5.78117070373318,3.02699560786571,3.40676990152261,1.37402137902306,2.15068535015921,2.23676107892416,2.83643540910244,6.05703095746325,0,0,1.35227839237992,0.66614393599564,1.4098700508785,0,0.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| ||
|short_description=p1@SNAI3 | |||
}} | }} |
Latest revision as of 09:56, 18 September 2015
Short description: | p1@SNAI3 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_SNAI3_5end |
Coexpression cluster: | NA |
Association with transcript: | -7bp_to_ENST00000332281, NM_178310, uc002flj.2_5end |
EntrezGene: | SNAI3 |
HGNC: | 18411 |
UniProt: | Q3KNW1 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
hematopoietic system | 9.30e-38 | 98 |
blood island | 9.30e-38 | 98 |
hemolymphoid system | 3.59e-34 | 108 |
bone marrow | 5.26e-27 | 76 |
immune system | 1.51e-25 | 93 |
bone element | 1.44e-23 | 82 |
skeletal element | 9.45e-20 | 90 |
skeletal system | 6.36e-16 | 100 |
blood | 5.03e-10 | 15 |
haemolymphatic fluid | 5.03e-10 | 15 |
organism substance | 5.03e-10 | 15 |
lateral plate mesoderm | 5.13e-10 | 203 |
connective tissue | 1.92e-08 | 371 |