FFCP PHASE1:Hg19::chr7:36327304..36327316,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=80820 | |EntrezGene=80820 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=22223 | |HGNC=22223 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=106bp_to_ENST00000468591_5end | |association_with_transcript=106bp_to_ENST00000468591_5end | ||
|cluster_id=chr7:36327304..36327316,+ | |||
|coexpression_cluster_id=C94 | |coexpression_cluster_id=C94 | ||
|description=CAGE_peak_11_at_EEPD1_5end | |description=CAGE_peak_11_at_EEPD1_5end | ||
Line 9: | Line 14: | ||
|ontology_enrichment_celltype=CL:0000791!1.09e-12!18;CL:0000789!1.09e-12!18;CL:0002420!1.09e-12!18;CL:0002419!1.09e-12!18;CL:0000790!1.09e-12!18;CL:0000084!3.51e-10!25;CL:0000827!3.51e-10!25;CL:0000625!2.70e-09!11 | |ontology_enrichment_celltype=CL:0000791!1.09e-12!18;CL:0000789!1.09e-12!18;CL:0002420!1.09e-12!18;CL:0002419!1.09e-12!18;CL:0000790!1.09e-12!18;CL:0000084!3.51e-10!25;CL:0000827!3.51e-10!25;CL:0000625!2.70e-09!11 | ||
|ontology_enrichment_celltype_v019=CL:0000895;4.59e-23;1!CL:0000771;3.06e-12;2!CL:0000094;5.67e-12;8!CL:0000081;5.75e-09;11!CL:0002178;8.96e-09;3!CL:0000775;1.04e-08;3!CL:0000898;1.35e-08;3 | |ontology_enrichment_celltype_v019=CL:0000895;4.59e-23;1!CL:0000771;3.06e-12;2!CL:0000094;5.67e-12;8!CL:0000081;5.75e-09;11!CL:0002178;8.96e-09;3!CL:0000775;1.04e-08;3!CL:0000898;1.35e-08;3 | ||
|ontology_enrichment_celltype_v019_2=CL:0000810,5.13e-23,1;CL:0000895,5.13e-23,1;CL:0002436,5.13e-23,1;CL:0002427,5.13e-23,1;CL:0002428,5.13e-23,1;CL:0002429,5.13e-23,1;CL:0002433,5.13e-23,1;CL:0002431,5.13e-23,1;CL:0002432,5.13e-23,1;CL:0000771,2.59e-12,2;CL:0000893,3.24e-12,2;CL:0002489,3.24e-12,2;CL:0000809,3.24e-12,2;CL:0000808,3.24e-12,2;CL:0000894,3.24e-12,2;CL:0000806,3.24e-12,2;CL:0000807,3.24e-12,2;CL:0000805,3.24e-12,2;CL:0002425,3.24e-12,2;CL:0000094,4.94e-12,8;CL:0000081,5.20e-09,11;CL:0002178,8.96e-09,3;CL:0000775,9.66e-09,3;CL:0000898,1.40e-08,3 | |||
|ontology_enrichment_development_v019=CL:0002427;4.59e-23;1!CL:0002425;3.06e-12;2 | |ontology_enrichment_development_v019=CL:0002427;4.59e-23;1!CL:0002425;3.06e-12;2 | ||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019=DOID:0050619;4.59e-23;1!DOID:1357;4.59e-23;1!DOID:3493;1.65e-12;2!DOID:3119;2.36e-07;14 | |ontology_enrichment_disease_v019=DOID:0050619;4.59e-23;1!DOID:1357;4.59e-23;1!DOID:3493;1.65e-12;2!DOID:3119;2.36e-07;14 | ||
|ontology_enrichment_disease_v019_2=DOID:0050619,6.40e-23,1;DOID:1357,6.40e-23,1;DOID:3493,1.65e-12,2;DOID:3119,2.36e-07,14 | |||
|ontology_enrichment_uberon=UBERON:0007023!2.42e-10!115 | |ontology_enrichment_uberon=UBERON:0007023!2.42e-10!115 | ||
|ontology_enrichment_uberon_v019=UBERON:0001764;4.59e-23;1!UBERON:0001825;4.59e-23;1!UBERON:0000178;8.21e-07;15!UBERON:0000179;8.21e-07;15!UBERON:0000463;8.21e-07;15 | |ontology_enrichment_uberon_v019=UBERON:0001764;4.59e-23;1!UBERON:0001825;4.59e-23;1!UBERON:0000178;8.21e-07;15!UBERON:0000179;8.21e-07;15!UBERON:0000463;8.21e-07;15 | ||
|ontology_enrichment_uberon_v019_2=UBERON:0001764,6.40e-23,1;UBERON:0001825,6.40e-23,1;UBERON:0000178,8.33e-07,15;UBERON:0000179,8.33e-07,15;UBERON:0000463,8.33e-07,15;UBERON:0002370,9.63e-07,4;UBERON:0005058,9.63e-07,4;UBERON:0009113,9.63e-07,4;UBERON:0003295,9.63e-07,4;UBERON:0005562,9.63e-07,4 | |||
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| ||
|short_description=p11@EEPD1 | |short_description=p11@EEPD1 | ||
}} | }} |
Latest revision as of 10:01, 18 September 2015
Short description: | p11@EEPD1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_11_at_EEPD1_5end |
Coexpression cluster: | C94_smallcell_adrenal_lung_nonsmall_small_somatostatinoma_teratocarcinoma |
Association with transcript: | 106bp_to_ENST00000468591_5end |
EntrezGene: | EEPD1 |
HGNC: | 22223 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
CD4-positive, alpha-beta thymocyte | 5.13e-23 | 1 |
naive thymus-derived CD4-positive, alpha-beta T cell | 5.13e-23 | 1 |
mature CD4 single-positive thymocyte | 5.13e-23 | 1 |
resting double-positive thymocyte | 5.13e-23 | 1 |
double-positive blast | 5.13e-23 | 1 |
CD69-positive double-positive thymocyte | 5.13e-23 | 1 |
CD69-positive, CD4-positive single-positive thymocyte | 5.13e-23 | 1 |
CD4-positive, CD8-intermediate double-positive thymocyte | 5.13e-23 | 1 |
CD24-positive, CD4 single-positive thymocyte | 5.13e-23 | 1 |
eosinophil | 2.59e-12 | 2 |
thymocyte | 3.24e-12 | 2 |
double negative thymocyte | 3.24e-12 | 2 |
double-positive, alpha-beta thymocyte | 3.24e-12 | 2 |
DN4 thymocyte | 3.24e-12 | 2 |
DN1 thymic pro-T cell | 3.24e-12 | 2 |
DN2 thymocyte | 3.24e-12 | 2 |
DN3 thymocyte | 3.24e-12 | 2 |
immature single positive thymocyte | 3.24e-12 | 2 |
early T lineage precursor | 3.24e-12 | 2 |
granulocyte | 4.94e-12 | 8 |
blood cell | 5.20e-09 | 11 |
epithelial cell of stomach | 8.96e-09 | 3 |
neutrophil | 9.66e-09 | 3 |
naive T cell | 1.40e-08 | 3 |
Ontology term | p-value | n |
---|---|---|
maxillary sinus | 6.40e-23 | 1 |
paranasal sinus | 6.40e-23 | 1 |
blood | 8.33e-07 | 15 |
haemolymphatic fluid | 8.33e-07 | 15 |
organism substance | 8.33e-07 | 15 |
thymus | 9.63e-07 | 4 |
hemolymphoid system gland | 9.63e-07 | 4 |
thymic region | 9.63e-07 | 4 |
pharyngeal gland | 9.63e-07 | 4 |
thymus primordium | 9.63e-07 | 4 |
Ontology term | p-value | n |
---|---|---|
paranasal sinus cancer | 6.40e-23 | 1 |
maxillary sinus cancer | 6.40e-23 | 1 |
signet ring cell adenocarcinoma | 1.65e-12 | 2 |
gastrointestinal system cancer | 2.36e-07 | 14 |