FFCP PHASE1:Hg19::chr12:46121294..46121301,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=400027 | |EntrezGene=400027 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=novel_noncoding | |||
|HGNC= | |HGNC= | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=402bp_to_NR_028408_5end | |association_with_transcript=402bp_to_NR_028408_5end | ||
|cluster_id=chr12:46121294..46121301,- | |||
|coexpression_cluster_id=C42 | |coexpression_cluster_id=C42 | ||
|description=CAGE_peak_12_at_LOC400027_5end | |description=CAGE_peak_12_at_LOC400027_5end | ||
|id=chr12:46121294..46121301,- | |id=chr12:46121294..46121301,- | ||
|ontology_enrichment_celltype= | |ontology_enrichment_celltype= | ||
|ontology_enrichment_celltype_v019=CL:0000771;5.96e-34;2!CL:0000306;9.45e-18;4!CL:0002222;9.45e-18;4!CL:0002224;9.45e-18;4!CL:0000094;1.41e-09;8!CL:0000081;2.55e-07;11 | |||
|ontology_enrichment_celltype_v019_2=CL:0000771,5.04e-34,2;CL:0000306,1.03e-17,4;CL:0002222,1.03e-17,4;CL:0002224,1.03e-17,4;CL:0000094,1.35e-09,8;CL:0000081,2.47e-07,11 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019=DOID:5409;7.35e-18;4!DOID:1325;8.16e-11;7!DOID:3904;8.16e-11;7!DOID:3905;1.04e-08;9 | |||
|ontology_enrichment_disease_v019_2=DOID:5409,7.35e-18,4;DOID:1325,8.16e-11,7;DOID:3904,8.16e-11,7;DOID:3905,1.04e-08,9 | |||
|ontology_enrichment_uberon= | |ontology_enrichment_uberon= | ||
|ontology_enrichment_uberon_v019=UBERON:0010077;9.45e-18;4!UBERON:0005389;9.45e-18;4!UBERON:0000484;9.45e-18;4!UBERON:0000965;9.45e-18;4!UBERON:0001803;9.45e-18;4!UBERON:0007625;2.55e-07;11 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0010077,1.03e-17,4;UBERON:0005389,1.03e-17,4;UBERON:0000484,1.03e-17,4;UBERON:0002546,1.03e-17,4;UBERON:0000965,1.03e-17,4;UBERON:0001803,1.03e-17,4;UBERON:0003073,1.03e-17,4;UBERON:0005426,1.03e-17,4;UBERON:0000076,1.47e-09,8;UBERON:0007625,2.63e-07,11 | |||
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| ||
|short_description=p12@LOC400027 | |short_description=p12@LOC400027 | ||
}} | }} |
Latest revision as of 10:02, 18 September 2015
Short description: | p12@LOC400027 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_12_at_LOC400027_5end |
Coexpression cluster: | C42_small_lung_maxillary_pharyngeal_Mesenchymal_Wilms_colon |
Association with transcript: | 402bp_to_NR_028408_5end |
EntrezGene: | LOC400027 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
eosinophil | 5.04e-34 | 2 |
crystallin accumulating cell | 1.03e-17 | 4 |
vertebrate lens cell | 1.03e-17 | 4 |
lens epithelial cell | 1.03e-17 | 4 |
granulocyte | 1.35e-09 | 8 |
blood cell | 2.47e-07 | 11 |
Ontology term | p-value | n |
---|---|---|
cuboidal epithelium | 1.03e-17 | 4 |
transparent eye structure | 1.03e-17 | 4 |
simple cuboidal epithelium | 1.03e-17 | 4 |
cranial placode | 1.03e-17 | 4 |
lens of camera-type eye | 1.03e-17 | 4 |
epithelium of lens | 1.03e-17 | 4 |
lens placode | 1.03e-17 | 4 |
lens vesicle | 1.03e-17 | 4 |
external ectoderm | 1.47e-09 | 8 |
pigment epithelium of eye | 2.63e-07 | 11 |
Ontology term | p-value | n |
---|---|---|
lung small cell carcinoma | 7.35e-18 | 4 |
bronchus cancer | 8.16e-11 | 7 |
bronchogenic carcinoma | 8.16e-11 | 7 |
lung carcinoma | 1.04e-08 | 9 |