FFCP PHASE1:Hg19::chr10:51572408..51572454,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=8031 | |EntrezGene=8031 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=7671 | |HGNC=7671 | ||
|TSSclassifier=strong | |||
|UniProt=Q96E88 | |UniProt=Q96E88 | ||
|association_with_transcript=0bp_to_ENST00000374082_5end | |association_with_transcript=0bp_to_ENST00000374082_5end | ||
|cluster_id=chr10:51572408..51572454,+ | |||
|coexpression_cluster_id=C3023 | |||
|description=CAGE_peak_3_at_NCOA4_5end | |description=CAGE_peak_3_at_NCOA4_5end | ||
|id=chr10:51572408..51572454,+ | |id=chr10:51572408..51572454,+ | ||
|ontology_enrichment_celltype=CL:0000763!3.41e-32!112;CL:0000049!3.41e-32!112;CL:0000766!5.63e-32!76;CL:0000839!1.54e-28!70;CL:0000557!6.71e-28!71;CL:0002009!2.92e-26!65;CL:0000860!3.95e-26!45;CL:0002194!9.15e-26!63;CL:0000576!9.15e-26!63;CL:0000040!9.15e-26!63;CL:0000559!9.15e-26!63;CL:0002057!9.40e-26!42;CL:0000037!3.37e-12!172;CL:0000566!3.37e-12!172;CL:0002032!6.66e-11!165;CL:0000837!6.66e-11!165;CL:0000738!3.62e-10!140;CL:0000988!1.17e-09!182;CL:0000134!3.13e-07!358;CL:0002320!7.89e-07!365;CL:0002031!8.62e-07!124 | |ontology_enrichment_celltype=CL:0000763!3.41e-32!112;CL:0000049!3.41e-32!112;CL:0000766!5.63e-32!76;CL:0000839!1.54e-28!70;CL:0000557!6.71e-28!71;CL:0002009!2.92e-26!65;CL:0000860!3.95e-26!45;CL:0002194!9.15e-26!63;CL:0000576!9.15e-26!63;CL:0000040!9.15e-26!63;CL:0000559!9.15e-26!63;CL:0002057!9.40e-26!42;CL:0000037!3.37e-12!172;CL:0000566!3.37e-12!172;CL:0002032!6.66e-11!165;CL:0000837!6.66e-11!165;CL:0000738!3.62e-10!140;CL:0000988!1.17e-09!182;CL:0000134!3.13e-07!358;CL:0002320!7.89e-07!365;CL:0002031!8.62e-07!124 | ||
|ontology_enrichment_celltype_v019=CL:0000860;2.11e-19;33!CL:0002057;2.11e-19;33!CL:0000473;2.97e-19;39!CL:0000234;2.97e-19;39!CL:0000576;2.14e-16;48!CL:0000766;2.58e-15;69!CL:0000763;2.18e-10;100 | |||
|ontology_enrichment_celltype_v019_2=CL:0000763,1.38e-32,108;CL:0000049,1.38e-32,108;CL:0000766,1.46e-32,72;CL:0000473,1.68e-29,48;CL:0000234,1.68e-29,48;CL:0000839,4.37e-29,66;CL:0000557,2.10e-28,67;CL:0002009,8.57e-27,61;CL:0002194,2.60e-26,59;CL:0000576,2.60e-26,59;CL:0000040,2.60e-26,59;CL:0000559,2.60e-26,59;CL:0000860,6.52e-26,42;CL:0002057,6.52e-26,42;CL:0000037,2.21e-12,168;CL:0002032,4.37e-11,161;CL:0000837,4.37e-11,161;CL:0000738,2.85e-10,136;CL:0000988,5.97e-10,177;CL:0000134,4.10e-07,354;CL:0002031,7.41e-07,120 | |||
|ontology_enrichment_development_v019=CL:0002057;7.54e-19;42!CL:0000049;1.43e-09;108 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002390!1.49e-27!102;UBERON:0003061!1.49e-27!102;UBERON:0002193!2.79e-25!112;UBERON:0002371!5.32e-23!80;UBERON:0001474!1.47e-20!86;UBERON:0002405!1.61e-20!115;UBERON:0004765!4.14e-18!101;UBERON:0001434!4.14e-18!101;UBERON:0003081!5.47e-12!216;UBERON:0000926!3.69e-10!448;UBERON:0004120!3.69e-10!448;UBERON:0006603!3.69e-10!448;UBERON:0002204!5.13e-09!167 | |ontology_enrichment_uberon=UBERON:0002390!1.49e-27!102;UBERON:0003061!1.49e-27!102;UBERON:0002193!2.79e-25!112;UBERON:0002371!5.32e-23!80;UBERON:0001474!1.47e-20!86;UBERON:0002405!1.61e-20!115;UBERON:0004765!4.14e-18!101;UBERON:0001434!4.14e-18!101;UBERON:0003081!5.47e-12!216;UBERON:0000926!3.69e-10!448;UBERON:0004120!3.69e-10!448;UBERON:0006603!3.69e-10!448;UBERON:0002204!5.13e-09!167 | ||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002390,3.88e-28,98;UBERON:0003061,3.88e-28,98;UBERON:0002193,6.57e-26,108;UBERON:0002371,1.99e-23,76;UBERON:0001474,7.49e-21,82;UBERON:0002405,1.80e-20,93;UBERON:0004765,4.00e-19,90;UBERON:0001434,1.11e-17,100;UBERON:0003081,3.98e-13,203;UBERON:0000926,1.33e-09,315;UBERON:0004120,1.33e-09,315;UBERON:0006603,1.33e-09,315;UBERON:0002204,1.44e-08,167 | |||
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| ||
|short_description=p3@NCOA4 | |short_description=p3@NCOA4 | ||
}} | }} |
Latest revision as of 10:35, 18 September 2015
Short description: | p3@NCOA4 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_3_at_NCOA4_5end |
Coexpression cluster: | C3023_Whole_CD14_Reticulocytes_Neutrophils_blood_Eosinophils_immature |
Association with transcript: | 0bp_to_ENST00000374082_5end |
EntrezGene: | NCOA4 |
HGNC: | 7671 |
UniProt: | Q96E88 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
myeloid cell | 1.38e-32 | 108 |
common myeloid progenitor | 1.38e-32 | 108 |
myeloid leukocyte | 1.46e-32 | 72 |
defensive cell | 1.68e-29 | 48 |
phagocyte | 1.68e-29 | 48 |
myeloid lineage restricted progenitor cell | 4.37e-29 | 66 |
granulocyte monocyte progenitor cell | 2.10e-28 | 67 |
macrophage dendritic cell progenitor | 8.57e-27 | 61 |
monopoietic cell | 2.60e-26 | 59 |
monocyte | 2.60e-26 | 59 |
monoblast | 2.60e-26 | 59 |
promonocyte | 2.60e-26 | 59 |
classical monocyte | 6.52e-26 | 42 |
CD14-positive, CD16-negative classical monocyte | 6.52e-26 | 42 |
hematopoietic stem cell | 2.21e-12 | 168 |
hematopoietic oligopotent progenitor cell | 4.37e-11 | 161 |
hematopoietic multipotent progenitor cell | 4.37e-11 | 161 |
leukocyte | 2.85e-10 | 136 |
hematopoietic cell | 5.97e-10 | 177 |
mesenchymal cell | 4.10e-07 | 354 |
hematopoietic lineage restricted progenitor cell | 7.41e-07 | 120 |
Ontology term | p-value | n |
---|---|---|
hematopoietic system | 3.88e-28 | 98 |
blood island | 3.88e-28 | 98 |
hemolymphoid system | 6.57e-26 | 108 |
bone marrow | 1.99e-23 | 76 |
bone element | 7.49e-21 | 82 |
immune system | 1.80e-20 | 93 |
skeletal element | 4.00e-19 | 90 |
skeletal system | 1.11e-17 | 100 |
lateral plate mesoderm | 3.98e-13 | 203 |
mesoderm | 1.33e-09 | 315 |
mesoderm-derived structure | 1.33e-09 | 315 |
presumptive mesoderm | 1.33e-09 | 315 |
musculoskeletal system | 1.44e-08 | 167 |