FFCP PHASE1:Hg19::chr6:36355397..36355406,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=51513 | |EntrezGene=51513 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=18160 | |HGNC=18160 | ||
|TSSclassifier=strong | |||
|UniProt=Q9Y603 | |UniProt=Q9Y603 | ||
|association_with_transcript=60bp_to_uc003olz.1,uc003oma.1,uc003omb.2,uc003omc.2,uc010jwg.2,uc010jwh.2,uc010jwi.2,uc010jwj.2,uc011dtl.1_5end | |association_with_transcript=60bp_to_uc003olz.1,uc003oma.1,uc003omb.2,uc003omc.2,uc010jwg.2,uc010jwh.2,uc010jwi.2,uc010jwj.2,uc011dtl.1_5end | ||
|cluster_id=chr6:36355397..36355406,- | |||
|coexpression_cluster_id=C7 | |coexpression_cluster_id=C7 | ||
|description=CAGE_peak_5_at_ETV7_5end | |description=CAGE_peak_5_at_ETV7_5end | ||
|id=chr6:36355397..36355406,- | |id=chr6:36355397..36355406,- | ||
|ontology_enrichment_celltype=CL:0002057!1.83e-09!42;CL:0000860!1.12e-08!45 | |ontology_enrichment_celltype=CL:0002057!1.83e-09!42;CL:0000860!1.12e-08!45 | ||
|ontology_enrichment_celltype_v019=CL:0000860;3.07e-33;33!CL:0002057;3.07e-33;33!CL:0000473;3.59e-24;39!CL:0000234;3.59e-24;39!CL:0000576;6.20e-19;48!CL:0000766;3.39e-08;69 | |||
|ontology_enrichment_celltype_v019_2=CL:0000860,9.27e-29,42;CL:0002057,9.27e-29,42;CL:0000473,4.39e-25,48;CL:0000234,4.39e-25,48;CL:0002194,6.25e-20,59;CL:0000576,6.25e-20,59;CL:0000040,6.25e-20,59;CL:0000559,6.25e-20,59;CL:0002009,2.89e-19,61;CL:0000839,8.98e-18,66;CL:0000557,1.68e-17,67;CL:0000766,2.99e-16,72;CL:0000988,2.02e-13,177;CL:0002087,2.51e-12,115;CL:0002031,8.88e-12,120;CL:0000763,1.28e-10,108;CL:0000049,1.28e-10,108;CL:0000738,2.74e-10,136;CL:0002032,1.52e-08,161;CL:0000837,1.52e-08,161;CL:0000037,3.81e-08,168 | |||
|ontology_enrichment_development_v019=CL:0002057;3.79e-22;42 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019=DOID:0060060;9.58e-17;1!DOID:0060061;9.58e-17;1!DOID:8691;9.58e-17;1 | |||
|ontology_enrichment_disease_v019_2=DOID:0060060,8.86e-17,1;DOID:0060061,8.86e-17,1;DOID:8691,8.86e-17,1 | |||
|ontology_enrichment_uberon=UBERON:0002390!3.86e-07!102;UBERON:0003061!3.86e-07!102;UBERON:0002193!4.65e-07!112 | |ontology_enrichment_uberon=UBERON:0002390!3.86e-07!102;UBERON:0003061!3.86e-07!102;UBERON:0002193!4.65e-07!112 | ||
|ontology_enrichment_uberon_v019=UBERON:0002331;3.67e-14;10!UBERON:0000178;1.20e-09;15!UBERON:0000179;1.20e-09;15!UBERON:0000463;1.20e-09;15 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002390,3.92e-21,98;UBERON:0003061,3.92e-21,98;UBERON:0002193,4.21e-19,108;UBERON:0002371,2.28e-15,76;UBERON:0001474,3.35e-14,82;UBERON:0002331,3.67e-14,10;UBERON:0000358,3.67e-14,10;UBERON:0000307,3.67e-14,10;UBERON:0000091,3.67e-14,10;UBERON:0000087,3.67e-14,10;UBERON:0007010,3.67e-14,10;UBERON:0007806,3.67e-14,10;UBERON:0008780,3.67e-14,10;UBERON:0005728,3.67e-14,10;UBERON:0004765,6.98e-13,90;UBERON:0002405,1.91e-12,93;UBERON:0001434,1.58e-11,100;UBERON:0003081,1.09e-09,203;UBERON:0000178,1.20e-09,15;UBERON:0000179,1.20e-09,15;UBERON:0000463,1.20e-09,15 | |||
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| ||
|short_description=p5@ETV7 | |short_description=p5@ETV7 | ||
}} | }} |
Latest revision as of 12:15, 18 September 2015
Short description: | p5@ETV7 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_5_at_ETV7_5end |
Coexpression cluster: | C7_CD14_Eosinophils_Neutrophils_Smooth_Basophils_Macrophage_Mast |
Association with transcript: | 60bp_to_uc003olz.1, uc003oma.1, uc003omb.2, uc003omc.2, uc010jwg.2, uc010jwh.2, uc010jwi.2, uc010jwj.2, uc011dtl.1_5end |
EntrezGene: | ETV7 |
HGNC: | 18160 |
UniProt: | Q9Y603 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
classical monocyte | 9.27e-29 | 42 |
CD14-positive, CD16-negative classical monocyte | 9.27e-29 | 42 |
defensive cell | 4.39e-25 | 48 |
phagocyte | 4.39e-25 | 48 |
monopoietic cell | 6.25e-20 | 59 |
monocyte | 6.25e-20 | 59 |
monoblast | 6.25e-20 | 59 |
promonocyte | 6.25e-20 | 59 |
macrophage dendritic cell progenitor | 2.89e-19 | 61 |
myeloid lineage restricted progenitor cell | 8.98e-18 | 66 |
granulocyte monocyte progenitor cell | 1.68e-17 | 67 |
myeloid leukocyte | 2.99e-16 | 72 |
hematopoietic cell | 2.02e-13 | 177 |
nongranular leukocyte | 2.51e-12 | 115 |
hematopoietic lineage restricted progenitor cell | 8.88e-12 | 120 |
myeloid cell | 1.28e-10 | 108 |
common myeloid progenitor | 1.28e-10 | 108 |
leukocyte | 2.74e-10 | 136 |
hematopoietic oligopotent progenitor cell | 1.52e-08 | 161 |
hematopoietic multipotent progenitor cell | 1.52e-08 | 161 |
hematopoietic stem cell | 3.81e-08 | 168 |
Ontology term | p-value | n |
---|---|---|
hematopoietic system | 3.92e-21 | 98 |
blood island | 3.92e-21 | 98 |
hemolymphoid system | 4.21e-19 | 108 |
bone marrow | 2.28e-15 | 76 |
bone element | 3.35e-14 | 82 |
umbilical cord | 3.67e-14 | 10 |
blastocyst | 3.67e-14 | 10 |
blastula | 3.67e-14 | 10 |
bilaminar disc | 3.67e-14 | 10 |
inner cell mass | 3.67e-14 | 10 |
cleaving embryo | 3.67e-14 | 10 |
connecting stalk | 3.67e-14 | 10 |
inner cell mass derived epiblast | 3.67e-14 | 10 |
extraembryonic mesoderm | 3.67e-14 | 10 |
skeletal element | 6.98e-13 | 90 |
immune system | 1.91e-12 | 93 |
skeletal system | 1.58e-11 | 100 |
lateral plate mesoderm | 1.09e-09 | 203 |
blood | 1.20e-09 | 15 |
haemolymphatic fluid | 1.20e-09 | 15 |
organism substance | 1.20e-09 | 15 |
Ontology term | p-value | n |
---|---|---|
non-Hodgkin lymphoma | 8.86e-17 | 1 |
cutaneous T cell lymphoma | 8.86e-17 | 1 |
mycosis fungoides | 8.86e-17 | 1 |