FFCP PHASE1:Hg19::chr11:59950018..59950037,-: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
(2 intermediate revisions by the same user not shown) | |||
Line 1: | Line 1: | ||
{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=64231 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=13375 | |||
|TSSclassifier=strong | |||
|UniProt= | |||
|association_with_transcript=0bp_to_ENST00000533660_5end | |||
|cluster_id=chr11:59950018..59950037,- | |||
|coexpression_cluster_id=C67 | |||
|description=CAGE_peak_5_at_MS4A6A_5end | |||
|id=chr11:59950018..59950037,- | |||
|ontology_enrichment_celltype=CL:0002009!2.88e-27!65;CL:0002194!3.19e-27!63;CL:0000576!3.19e-27!63;CL:0000040!3.19e-27!63;CL:0000559!3.19e-27!63;CL:0000557!9.28e-24!71;CL:0000839!4.18e-23!70;CL:0000766!1.04e-22!76;CL:0000763!3.63e-17!112;CL:0000049!3.63e-17!112;CL:0002057!5.02e-17!42;CL:0000860!2.68e-15!45;CL:0002087!4.62e-14!119;CL:0000738!2.01e-13!140;CL:0000037!6.45e-12!172;CL:0000566!6.45e-12!172;CL:0002031!1.74e-11!124;CL:0000988!2.29e-10!182;CL:0002032!7.08e-10!165;CL:0000837!7.08e-10!165 | |||
|ontology_enrichment_celltype_v019=CL:0000235;1.01e-17;6!CL:0002393;2.85e-16;6!CL:0002397;2.85e-16;6!CL:0002619;3.33e-14;3!CL:0000784;2.10e-13;3!CL:0000576;1.40e-12;48!CL:0000766;4.24e-10;69!CL:0000473;8.24e-08;39!CL:0000234;8.24e-08;39 | |||
|ontology_enrichment_celltype_v019_2=CL:0002194,4.36e-31,59;CL:0000576,4.36e-31,59;CL:0000040,4.36e-31,59;CL:0000559,4.36e-31,59;CL:0002009,6.74e-30,61;CL:0000839,3.09e-27,66;CL:0000557,9.45e-27,67;CL:0000766,1.59e-24,72;CL:0000763,1.70e-19,108;CL:0000049,1.70e-19,108;CL:0000235,9.12e-18,6;CL:0000473,1.32e-15,48;CL:0000234,1.32e-15,48;CL:0002619,3.34e-14,3;CL:0000784,1.98e-13,3;CL:0002087,2.38e-13,115;CL:0000738,6.64e-13,136;CL:0000037,1.38e-12,168;CL:0002031,1.43e-12,120;CL:0000988,1.28e-11,177;CL:0002032,4.41e-11,161;CL:0000837,4.41e-11,161;CL:0002393,9.82e-11,9;CL:0002397,9.82e-11,9;CL:0000860,1.37e-07,42;CL:0002057,1.37e-07,42 | |||
|ontology_enrichment_development_v019=UBERON:0004872;4.08e-14;7!UBERON:0006965;4.98e-09;2!CL:0000049;4.75e-07;108 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0007023!6.12e-45!115;UBERON:0002390!3.85e-26!102;UBERON:0003061!3.85e-26!102;UBERON:0002193!1.62e-24!112;UBERON:0002371!1.60e-19!80;UBERON:0002405!2.01e-17!115;UBERON:0001474!3.25e-17!86;UBERON:0004765!1.37e-13!101;UBERON:0001434!1.37e-13!101;UBERON:0003081!1.91e-08!216;UBERON:0000062!6.64e-08!511;UBERON:0001049!2.21e-07!57;UBERON:0005068!2.21e-07!57;UBERON:0006241!2.21e-07!57;UBERON:0007135!2.21e-07!57;UBERON:0000479!9.97e-07!787 | |||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002390,5.66e-24,98;UBERON:0003061,5.66e-24,98;UBERON:0002405,1.49e-23,93;UBERON:0002193,4.58e-23,108;UBERON:0002371,5.93e-23,76;UBERON:0001474,6.99e-21,82;UBERON:0004765,1.51e-18,90;UBERON:0001434,3.72e-16,100;UBERON:0003081,2.93e-14,203;UBERON:0002204,2.37e-09,167;UBERON:0000926,1.22e-08,315;UBERON:0004120,1.22e-08,315;UBERON:0006603,1.22e-08,315 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.152826811495903,0.0821005894499457,0.0787107813136792,0.393364276848904,0,0.928896739896456,0,0,0,0,0,0,2.21598163412751,1.60435557976113,0.651032612147555,40.9765317859062,18.7858326291008,35.2878527658836,0.872389432677388,0,0.485168122375632,0.232429036905685,0.411167888021826,0.619412741790207,0.28769239232215,0,0.47296445977717,0.689491361473237,0,0,0,0,0.674170453335254,0.918251677112708,0.320929027076094,0.639337125799041,0.329851300186716,0.199463657621632,1.27867425159808,0,0,0,0.502497330513487,0,1.08594422352558,0,0.736555271975129,0.316462387440884,1.47878700418359,1.4882300997553,1.04829322754188,3.48218756554135,3.75442232103766,2.08943262706204,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.150575119077773,0.127986611154418,0,0.236777252044017,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.458426764241994,0,0,0.324547393654683,0,1.32957960518865,3.57735936458013,3.43196946468077,2.60020250930695,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.590789906681404,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,14.280586353069,0,1.48631162288728,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.64871341923571,8.53837055434615,6.32501818449095,0,0,0,0,0,0,0,0,0,0,0,0,0,0.167516265334349,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.413536052245775,0.215714200818617,0.533637789017222,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.75169719801128,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.941438007767792,0,0,0,0,1.52234282769651,0.764637207142375,2.27858874869665,0,0.411362273086194,0,0.540031437238115,0.79312517629427,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.92705690124439,3.43059502224781,0.851692475380653,0.343505344755765,10.4461859864876,14.3152709051146,13.3479313369527,0,0,0,0,0,0,0,1.02555725490326,0,0,0,0,0,0,0,0.281338832821026,0,0,0,2.19172787076177,0.552567831062295,0,0,0,0,0,0,6.13886844272246,0.591860433821602,0,0,0,0.0927680981618513,0,0,0,0.724999575434793,0,0,0,0,0,0,0,0.241192877250816,0,0,0,0.219385397153973,0,0,0.461701551022782,0,0,0,0,0.31900115973192,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.884575645033392,0.611030144933625,0,0,0,0.337005664903385,1.60515529459758,0,0,0,0,0.394584402849391,0,0.30607276163049,2.0851571277401,0,0,0,0,0,0,0,0,0,0,0,3.31980669659857,0,0,0,0,0.290967049465258,0,0.225980740780532,0,0,0.126621591911757,0,0,0.640358984218058,0,0,0,0,0,0,0,0,0,0,0,0,0.958337652243951,0,0,0,1.67569440763353,0.916641696046735,0,0,0.858452096273142,0.446342914883745,0.201550417460179,0,0,0,0,0,0,0,0,0.136203406111576,0,0,0,0.2249738915515,0,0.0607495566580247,0,0.788057072991982,0.157363764404994,0,0,0,0.714695326373367,0,0,0,0,0,0,0.410462603746695,0,0,1.02586563574658,1.32506888912221,0.258565912723101,0.26446520348538,0,0,0.747511887973863,0.314408610199332,1.65695622138878,2.97699613087171,0,0,0,0,0.2506898940227,0.306345576763462,0,0,0,0,0.250381861413,0,0.221858103073705,0.310482014706917,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.553033744606923,0,0,0,0,0,0,0,0.106691729694141,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.798169295285756,0,0,0.138314504928436,0.645902582527404,0,0,0,0,0,0,0,0,0.150420656698515,0,0,0,0,0,0,0,0,0,0,0.548257766857182,1.98484471355718,0,0,0,0.336283722218824,0.606965604236632,0.682986574053893,1.41923792260222,0,0,0.271878931907327,0.0657727735628491,0,0,0.78493092850514,0.157115589916002,0,0,0,0,0.500335809236594,0,0,0,0,0,0,0,1.72090943528111,0,0,0,0,0,0,0,0,0,0,0.205325613712494,1.1598144313382,0.485710993059139,0,0,0,0,0,0,0.926089897295336,0.655678681511872,0,0.980593287015622,0,0.392616934229891,0.297046400327086,0,0,2.72553362141575,1.61144719933943,0,0,0,0,0.730336388246517,0,0.573358332605805,0,0.203974470572744,0,0,0,0,0,0,0,0,0,0,0,0,0.909344378618873,0.535928260312357,0,0.310298987585686,1.27940389140589,0.476128862927481,0.516711278688049,0.993195428733726,0,0.12729431655633,0.202117188958219,1.30630048738177,0.684466602170562,0.404112318087525,0.502055437748735,0.665320713092027,0,0,0,0,0,0.488965776731466,0,0,1.00636896795513,0 | |||
|short_description=p5@MS4A6A | |||
}} |
Latest revision as of 13:08, 18 September 2015
Short description: | p5@MS4A6A |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_5_at_MS4A6A_5end |
Coexpression cluster: | C67_CD14_Monocytederived_Macrophage_dura_Dendritic_spleen_lung |
Association with transcript: | 0bp_to_ENST00000533660_5end |
EntrezGene: | MS4A6A |
HGNC: | 13375 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
monopoietic cell | 4.36e-31 | 59 |
monocyte | 4.36e-31 | 59 |
monoblast | 4.36e-31 | 59 |
promonocyte | 4.36e-31 | 59 |
macrophage dendritic cell progenitor | 6.74e-30 | 61 |
myeloid lineage restricted progenitor cell | 3.09e-27 | 66 |
granulocyte monocyte progenitor cell | 9.45e-27 | 67 |
myeloid leukocyte | 1.59e-24 | 72 |
myeloid cell | 1.70e-19 | 108 |
common myeloid progenitor | 1.70e-19 | 108 |
macrophage | 9.12e-18 | 6 |
defensive cell | 1.32e-15 | 48 |
phagocyte | 1.32e-15 | 48 |
adult endothelial progenitor cell | 3.34e-14 | 3 |
plasmacytoid dendritic cell | 1.98e-13 | 3 |
nongranular leukocyte | 2.38e-13 | 115 |
leukocyte | 6.64e-13 | 136 |
hematopoietic stem cell | 1.38e-12 | 168 |
hematopoietic lineage restricted progenitor cell | 1.43e-12 | 120 |
hematopoietic cell | 1.28e-11 | 177 |
hematopoietic oligopotent progenitor cell | 4.41e-11 | 161 |
hematopoietic multipotent progenitor cell | 4.41e-11 | 161 |
intermediate monocyte | 9.82e-11 | 9 |
CD14-positive, CD16-positive monocyte | 9.82e-11 | 9 |
classical monocyte | 1.37e-07 | 42 |
CD14-positive, CD16-negative classical monocyte | 1.37e-07 | 42 |
Ontology term | p-value | n |
---|---|---|
hematopoietic system | 5.66e-24 | 98 |
blood island | 5.66e-24 | 98 |
immune system | 1.49e-23 | 93 |
hemolymphoid system | 4.58e-23 | 108 |
bone marrow | 5.93e-23 | 76 |
bone element | 6.99e-21 | 82 |
skeletal element | 1.51e-18 | 90 |
skeletal system | 3.72e-16 | 100 |
lateral plate mesoderm | 2.93e-14 | 203 |
musculoskeletal system | 2.37e-09 | 167 |
mesoderm | 1.22e-08 | 315 |
mesoderm-derived structure | 1.22e-08 | 315 |
presumptive mesoderm | 1.22e-08 | 315 |