FFCP PHASE1:Hg19::chr1:53925435..53925444,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=63948 | |EntrezGene=63948 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=13913 | |HGNC=13913 | ||
|TSSclassifier=strong | |||
|UniProt=B4DXR0 | |UniProt=B4DXR0 | ||
|association_with_transcript=-38bp_to_ENST00000431335_5end | |association_with_transcript=-38bp_to_ENST00000431335_5end | ||
|cluster_id=chr1:53925435..53925444,+ | |||
|coexpression_cluster_id=C1 | |||
|description=CAGE_peak_5_at_DMRTB1_5end | |description=CAGE_peak_5_at_DMRTB1_5end | ||
|id=chr1:53925435..53925444,+ | |id=chr1:53925435..53925444,+ | ||
|ontology_enrichment_celltype=CL:0002322!1.98e-32!5;CL:0000039!7.73e-24!7;CL:0000586!7.73e-24!7;CL:0000148!4.50e-08!10;CL:0000541!4.50e-08!10 | |ontology_enrichment_celltype=CL:0002322!1.98e-32!5;CL:0000039!7.73e-24!7;CL:0000586!7.73e-24!7;CL:0000148!4.50e-08!10;CL:0000541!4.50e-08!10 | ||
|ontology_enrichment_celltype_v019=CL:0000039;5.70e-07;7!CL:0000586;5.70e-07;7 | |||
|ontology_enrichment_celltype_v019_2=CL:0000039,6.04e-07,7;CL:0000586,6.04e-07,7 | |||
|ontology_enrichment_development_v019=UBERON:0009117;2.70e-36;10!UBERON:0005564;2.70e-36;10 | |||
|ontology_enrichment_disease=DOID:3095!5.01e-08!22;DOID:2994!5.01e-08!22 | |ontology_enrichment_disease=DOID:3095!5.01e-08!22;DOID:2994!5.01e-08!22 | ||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000473!1.44e-56!8;UBERON:0003135!3.03e-41!11;UBERON:0000991!9.84e-22!21;UBERON:0009196!9.84e-22!21;UBERON:0009117!9.84e-22!21;UBERON:0005564!9.84e-22!21;UBERON:0004176!9.36e-21!22;UBERON:0003101!9.36e-21!22;UBERON:0000079!9.36e-21!22;UBERON:0002323!5.49e-10!46;UBERON:0003133!1.42e-09!48;UBERON:0004458!2.23e-09!49;UBERON:0005156!8.60e-08!59;UBERON:0000990!8.60e-08!59;UBERON:0003886!2.69e-07!63 | |||
|ontology_enrichment_uberon_v019=UBERON:0000473;4.34e-45;8!UBERON:0003135;4.29e-33;11!UBERON:0000991;8.29e-18;21!UBERON:0003101;4.85e-17;22!UBERON:0000079;4.85e-17;22 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000473,4.34e-45,8;UBERON:0003135,4.29e-33,11;UBERON:0000991,8.29e-18,21;UBERON:0009196,8.29e-18,21;UBERON:0009117,8.29e-18,21;UBERON:0005564,8.29e-18,21;UBERON:0004176,4.85e-17,22;UBERON:0003101,4.85e-17,22;UBERON:0000079,4.85e-17,22;UBERON:0002323,1.40e-08,46;UBERON:0003133,2.96e-08,48;UBERON:0004458,4.22e-08,49;UBERON:0003886,2.03e-07,54;UBERON:0005156,7.53e-07,59;UBERON:0000990,7.53e-07,59 | |||
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|short_description=p5@DMRTB1 | |short_description=p5@DMRTB1 | ||
}} | }} |
Latest revision as of 13:53, 18 September 2015
Short description: | p5@DMRTB1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_5_at_DMRTB1_5end |
Coexpression cluster: | C1_testis_epididymis_embryonic_medulla_pituitary_trachea_caudate |
Association with transcript: | -38bp_to_ENST00000431335_5end |
EntrezGene: | DMRTB1 |
HGNC: | 13913 |
UniProt: | B4DXR0 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
germ line cell | 6.04e-07 | 7 |
germ cell | 6.04e-07 | 7 |
Ontology term | p-value | n |
---|---|---|
testis | 4.34e-45 | 8 |
male reproductive organ | 4.29e-33 | 11 |
gonad | 8.29e-18 | 21 |
indifferent external genitalia | 8.29e-18 | 21 |
indifferent gonad | 8.29e-18 | 21 |
gonad primordium | 8.29e-18 | 21 |
external genitalia | 4.85e-17 | 22 |
male organism | 4.85e-17 | 22 |
male reproductive system | 4.85e-17 | 22 |
body cavity | 1.40e-08 | 46 |
reproductive organ | 2.96e-08 | 48 |
body cavity or lining | 4.22e-08 | 49 |
body cavity precursor | 2.03e-07 | 54 |
reproductive structure | 7.53e-07 | 59 |
reproductive system | 7.53e-07 | 59 |