FFCP PHASE1:Hg19::chr3:48514483..48514523,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=51246 | |EntrezGene=51246 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=30376 | |HGNC=30376 | ||
|TSSclassifier=strong | |||
|UniProt=Q8N114 | |UniProt=Q8N114 | ||
|association_with_transcript=0bp_to_ENST00000494854,ENST00000497863,uc003ctm.1,uc003ctn.1,uc003ctt.2,uc003ctu.1_5end | |association_with_transcript=0bp_to_ENST00000494854,ENST00000497863,uc003ctm.1,uc003ctn.1,uc003ctt.2,uc003ctu.1_5end | ||
|cluster_id=chr3:48514483..48514523,- | |||
|description=CAGE_peak_1_at_SHISA5_5end | |description=CAGE_peak_1_at_SHISA5_5end | ||
|id=chr3:48514483..48514523,- | |id=chr3:48514483..48514523,- | ||
|ontology_enrichment_celltype=CL:0000222!1.31e-20!119;CL:0000144!2.14e-16!625;CL:0000220!3.00e-16!246;CL:0002321!9.16e-16!248;CL:0002371!2.73e-15!591;CL:0002078!3.07e-13!44;CL:0000115!2.28e-12!35;CL:0000192!9.88e-12!42;CL:0000514!9.88e-12!42;CL:0000183!8.00e-11!59;CL:0000213!8.31e-11!57;CL:0000215!8.31e-11!57;CL:0000359!2.02e-10!32;CL:0002139!1.10e-09!24;CL:0000548!2.03e-09!679;CL:0000004!2.03e-09!679;CL:0000255!2.03e-09!679;CL:0000680!4.00e-09!57;CL:0000056!4.00e-09!57;CL:0000355!4.00e-09!57;CL:0000055!9.10e-09!180;CL:0000012!1.00e-08!682;CL:0000187!1.04e-08!54;CL:0000003!1.44e-08!722;CL:1000449!2.25e-08!16;CL:0000071!1.05e-07!18;CL:0002546!1.05e-07!18;CL:0000393!1.54e-07!60;CL:0000211!1.54e-07!60;CL:0002681!2.63e-07!13;CL:0002584!2.63e-07!13 | |ontology_enrichment_celltype=CL:0000222!1.31e-20!119;CL:0000144!2.14e-16!625;CL:0000220!3.00e-16!246;CL:0002321!9.16e-16!248;CL:0002371!2.73e-15!591;CL:0002078!3.07e-13!44;CL:0000115!2.28e-12!35;CL:0000192!9.88e-12!42;CL:0000514!9.88e-12!42;CL:0000183!8.00e-11!59;CL:0000213!8.31e-11!57;CL:0000215!8.31e-11!57;CL:0000359!2.02e-10!32;CL:0002139!1.10e-09!24;CL:0000548!2.03e-09!679;CL:0000004!2.03e-09!679;CL:0000255!2.03e-09!679;CL:0000680!4.00e-09!57;CL:0000056!4.00e-09!57;CL:0000355!4.00e-09!57;CL:0000055!9.10e-09!180;CL:0000012!1.00e-08!682;CL:0000187!1.04e-08!54;CL:0000003!1.44e-08!722;CL:1000449!2.25e-08!16;CL:0000071!1.05e-07!18;CL:0002546!1.05e-07!18;CL:0000393!1.54e-07!60;CL:0000211!1.54e-07!60;CL:0002681!2.63e-07!13;CL:0002584!2.63e-07!13 | ||
|ontology_enrichment_celltype_v019=CL:0000115;2.73e-11;36!CL:0000359;6.74e-10;32!CL:0002139;9.87e-10;24!CL:0000192;3.46e-09;43!CL:0002078;5.41e-09;45!CL:1000449;5.11e-08;15!CL:0000071;9.35e-08;18!CL:0000213;5.64e-07;58!CL:0000215;5.64e-07;58!CL:0002681;5.93e-07;12!CL:0002584;5.93e-07;12 | |||
|ontology_enrichment_celltype_v019_2=CL:0000222,1.69e-21,121;CL:0002321,1.87e-16,250;CL:0002078,8.64e-14,45;CL:0000115,6.19e-13,36;CL:0000192,4.25e-12,43;CL:0000514,4.25e-12,43;CL:0000213,2.73e-11,58;CL:0000215,2.73e-11,58;CL:0000359,2.02e-10,32;CL:0002139,1.10e-09,24;CL:0000680,1.90e-09,58;CL:0000056,1.90e-09,58;CL:0000355,1.90e-09,58;CL:0000187,4.96e-09,55;CL:1000449,5.23e-08,15;CL:0000393,7.75e-08,61;CL:0000211,7.75e-08,61;CL:0000071,1.05e-07,18;CL:0002546,1.05e-07,18;CL:0002681,6.08e-07,12;CL:0002584,6.08e-07,12 | |||
|ontology_enrichment_development_v019=CL:0000514;3.46e-09;43!CL:0002546;9.35e-08;18 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002049!7.58e-20!79;UBERON:0007798!7.58e-20!79;UBERON:0000055!3.44e-18!69;UBERON:0004535!4.47e-18!110;UBERON:0001009!8.04e-17!113;UBERON:0003914!5.05e-16!118;UBERON:0001981!2.33e-15!60;UBERON:0007500!2.33e-15!60;UBERON:0004537!2.33e-15!60;UBERON:0006965!2.33e-15!60;UBERON:0004872!7.75e-14!84;UBERON:0001637!3.87e-12!42;UBERON:0003509!3.87e-12!42;UBERON:0004572!3.87e-12!42;UBERON:0000490!1.77e-11!138;UBERON:0005256!2.50e-11!143;UBERON:0000486!3.04e-10!82;UBERON:0000914!2.67e-09!83;UBERON:0002329!2.67e-09!83;UBERON:0003077!2.67e-09!83;UBERON:0003059!2.67e-09!83;UBERON:0007282!2.67e-09!83;UBERON:0009618!2.67e-09!83;UBERON:0007285!2.67e-09!83;UBERON:0000353!4.30e-09!17;UBERON:0004290!7.98e-09!70;UBERON:0003081!9.58e-09!216;UBERON:0004211!2.25e-08!16;UBERON:0001285!2.25e-08!16;UBERON:0007684!2.25e-08!16;UBERON:0003220!2.25e-08!16;UBERON:0004208!2.25e-08!16;UBERON:0004573!7.10e-08!33;UBERON:0004571!7.10e-08!33;UBERON:0006555!8.07e-08!17;UBERON:0005103!8.07e-08!17;UBERON:0000083!8.07e-08!17;UBERON:0009201!8.07e-08!17;UBERON:0004819!8.07e-08!17;UBERON:0006553!8.07e-08!17;UBERON:0003074!8.07e-08!17;UBERON:0003060!8.07e-08!17;UBERON:0001986!1.05e-07!18;UBERON:0004638!1.05e-07!18;UBERON:0004852!1.05e-07!18;UBERON:0001134!2.18e-07!61;UBERON:0002036!2.18e-07!61;UBERON:0003082!2.18e-07!61;UBERON:0001225!2.63e-07!13;UBERON:0008987!2.63e-07!13;UBERON:0002385!4.63e-07!63;UBERON:0001015!4.63e-07!63;UBERON:0000383!4.63e-07!63;UBERON:0000487!5.44e-07!22;UBERON:0002100!7.25e-07!216;UBERON:0000080!7.52e-07!18;UBERON:0002120!7.52e-07!18;UBERON:0004875!7.52e-07!18;UBERON:0005721!7.52e-07!18;UBERON:0005754!7.52e-07!18;UBERON:0007297!7.52e-07!18 | |||
|ontology_enrichment_uberon_v019=UBERON:0003914;2.89e-10;74!UBERON:0000055;4.67e-09;65!UBERON:0001637;5.01e-09;42!UBERON:0003509;5.01e-09;42!UBERON:0004572;5.01e-09;42!UBERON:0002049;6.50e-09;75!UBERON:0007798;6.50e-09;75!UBERON:0007500;9.07e-09;56!UBERON:0001981;9.07e-09;56!UBERON:0004537;9.07e-09;56!UBERON:0000353;2.68e-08;15!UBERON:0006555;5.11e-08;15!UBERON:0004819;5.11e-08;15!UBERON:0001285;5.11e-08;15!UBERON:0007684;5.11e-08;15!UBERON:0004638;9.35e-08;18!UBERON:0001986;9.35e-08;18!UBERON:0004852;9.35e-08;18!UBERON:0004573;3.20e-07;33!UBERON:0004571;3.20e-07;33!UBERON:0000487;5.00e-07;22!UBERON:0001225;5.93e-07;12!UBERON:0008987;5.93e-07;12!UBERON:0006914;9.91e-07;25 | |||
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| ||
|short_description=p1@SHISA5 | |short_description=p1@SHISA5 | ||
}} | }} |
Latest revision as of 14:13, 18 September 2015
Short description: | p1@SHISA5 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_SHISA5_5end |
Coexpression cluster: | NA |
Association with transcript: | 0bp_to_ENST00000494854, ENST00000497863, uc003ctm.1, uc003ctn.1, uc003ctt.2, uc003ctu.1_5end |
EntrezGene: | SHISA5 |
HGNC: | 30376 |
UniProt: | Q8N114 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
mesodermal cell | 1.69e-21 | 121 |
embryonic cell | 1.87e-16 | 250 |
meso-epithelial cell | 8.64e-14 | 45 |
endothelial cell | 6.19e-13 | 36 |
smooth muscle cell | 4.25e-12 | 43 |
smooth muscle myoblast | 4.25e-12 | 43 |
lining cell | 2.73e-11 | 58 |
barrier cell | 2.73e-11 | 58 |
vascular associated smooth muscle cell | 2.02e-10 | 32 |
endothelial cell of vascular tree | 1.10e-09 | 24 |
muscle precursor cell | 1.90e-09 | 58 |
myoblast | 1.90e-09 | 58 |
multi-potent skeletal muscle stem cell | 1.90e-09 | 58 |
muscle cell | 4.96e-09 | 55 |
epithelial cell of nephron | 5.23e-08 | 15 |
electrically responsive cell | 7.75e-08 | 61 |
electrically active cell | 7.75e-08 | 61 |
blood vessel endothelial cell | 1.05e-07 | 18 |
embryonic blood vessel endothelial progenitor cell | 1.05e-07 | 18 |
kidney cortical cell | 6.08e-07 | 12 |
renal cortical epithelial cell | 6.08e-07 | 12 |