FFCP PHASE1:Hg19::chr3:4856349..4856363,+: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
(2 intermediate revisions by the same user not shown) | |||
Line 1: | Line 1: | ||
{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=3708 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=6180 | |||
|TSSclassifier=strong | |||
|UniProt= | |||
|association_with_transcript=20bp_to_ENST00000478515_5end | |||
|cluster_id=chr3:4856349..4856363,+ | |||
|coexpression_cluster_id=C7 | |||
|description=CAGE_peak_8_at_ITPR1_5end | |||
|id=chr3:4856349..4856363,+ | |||
|ontology_enrichment_celltype=CL:0002057!2.97e-41!42;CL:0000860!1.05e-37!45;CL:0002009!3.46e-30!65;CL:0002194!9.16e-30!63;CL:0000576!9.16e-30!63;CL:0000040!9.16e-30!63;CL:0000559!9.16e-30!63;CL:0000557!1.41e-29!71;CL:0000839!1.57e-28!70;CL:0000766!7.38e-27!76;CL:0000763!7.38e-26!112;CL:0000049!7.38e-26!112;CL:0002032!8.76e-13!165;CL:0000837!8.76e-13!165;CL:0002031!9.77e-12!124;CL:0000037!1.06e-11!172;CL:0000566!1.06e-11!172;CL:0002087!1.91e-10!119;CL:0000988!2.54e-10!182;CL:0000738!7.59e-10!140 | |||
|ontology_enrichment_celltype_v019=CL:0000860;1.09e-134;33!CL:0002057;1.09e-134;33!CL:0000473;5.94e-93;39!CL:0000234;5.94e-93;39!CL:0000576;1.34e-62;48!CL:0000766;1.67e-32;69!CL:0000763;4.92e-20;100!CL:0002087;2.36e-15;104!CL:0000738;5.98e-10;136 | |||
|ontology_enrichment_celltype_v019_2=CL:0000860,3.09e-115,42;CL:0002057,3.09e-115,42;CL:0000473,4.00e-100,48;CL:0000234,4.00e-100,48;CL:0002194,5.85e-79,59;CL:0000576,5.85e-79,59;CL:0000040,5.85e-79,59;CL:0000559,5.85e-79,59;CL:0002009,3.15e-76,61;CL:0000839,4.13e-70,66;CL:0000557,5.39e-69,67;CL:0000766,7.10e-64,72;CL:0000763,1.27e-53,108;CL:0000049,1.27e-53,108;CL:0002087,4.88e-38,115;CL:0002031,3.18e-36,120;CL:0002032,4.38e-34,161;CL:0000837,4.38e-34,161;CL:0000037,2.03e-32,168;CL:0000738,2.64e-31,136;CL:0000988,1.82e-30,177;CL:0000134,4.06e-12,354;CL:0002320,9.29e-12,361;CL:0000219,1.72e-10,386;CL:0000048,6.16e-09,427;CL:0000723,1.01e-08,433;CL:0000034,1.91e-08,441 | |||
|ontology_enrichment_development_v019=CL:0002057;1.52e-85;42!CL:0000049;6.94e-18;108 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0001474!4.05e-26!86;UBERON:0002371!8.32e-25!80;UBERON:0004765!1.23e-22!101;UBERON:0001434!1.23e-22!101;UBERON:0002390!1.04e-17!102;UBERON:0003061!1.04e-17!102;UBERON:0002405!2.59e-15!115;UBERON:0002193!4.89e-15!112;UBERON:0002204!4.86e-13!167;UBERON:0001950!1.90e-09!20;UBERON:0001869!2.28e-09!32;UBERON:0001893!1.37e-08!34;UBERON:0002020!1.40e-08!34;UBERON:0003528!1.40e-08!34;UBERON:0002619!2.34e-08!22;UBERON:0002791!7.38e-08!33;UBERON:0000956!4.77e-07!25;UBERON:0000203!4.77e-07!25;UBERON:0003081!9.44e-07!216 | |||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002371,2.95e-60,76;UBERON:0001474,1.75e-55,82;UBERON:0004765,4.29e-50,90;UBERON:0002405,2.61e-48,93;UBERON:0002390,1.42e-45,98;UBERON:0003061,1.42e-45,98;UBERON:0001434,1.48e-44,100;UBERON:0002193,7.39e-41,108;UBERON:0002204,1.97e-24,167;UBERON:0003081,1.29e-20,203;UBERON:0002384,2.87e-11,371;UBERON:0000926,3.96e-11,315;UBERON:0004120,3.96e-11,315;UBERON:0006603,3.96e-11,315 | |||
|phase1_expression=0,0.214100523890983,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.393364276848904,0,0,0,0,0,0,0,0,0.553995408531877,0,0,0,0,0,2.03557534291391,3.02300754951048,1.94067248950253,2.55671940596253,2.05583944010913,7.74265927237759,7.48000220037591,3.84241059793651,11.3511470346521,1.72372840368309,3.87290810150296,4.06279459783025,5.83551252582075,6.5497476013883,8.7642158933583,5.50951006267625,8.98601275813062,4.47535988059329,2.96866170168044,3.39088217956774,5.96714650745772,2.03146467040009,1.13477044938228,3.73693349397345,10.0499466102697,7.30076085788282,12.3797641481916,1.81619850790011,5.15588690382591,3.48108626184973,0,0,0.209658645508376,0,0,0.16072558669708,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.130979075497713,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0892997282840798,0,0.225222960966644,0,0.949265659568129,0,0,0,0,0,0,0.132409180813219,0,0,0,0,0,0,0,0,0,0,0,0.312160076830321,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.590789906681404,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.246217006087397,0.234004265139238,0.297262324577456,0,0.335964256397719,0,0,0,0,0,0.088048434013226,0,0.144119953416961,0,0,0,0,0,0,0,0,0,0,0,0.646358578788889,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.153461973288062,0,0.128139149255701,0,0,0,0,0.177561725313127,0,0,0,0,0,0,0,0,0,0,0.0770153371044148,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0915694648183434,0.082509499920588,0,0,0,0,0,0.15350367472613,0.137836572484531,0.107420244868274,0,0.0852266274161009,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.655894752046633,0,0,0,0,0.0982490410131212,0,0,0,0,0,0,0,0,0,0.0941438007767792,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.245040215981032,0,0,0,0,0,0.766021480529467,0,0,0,0,0,0,0,0.1605880751037,0.201799707191048,0,0,0,0,0,0,1.67043704337145,0,0,0,0,0,0,0,0,0,0,0,0,0.994147647766298,0.281338832821026,0,0,0,0,0,0,0.920418142519393,0,0,0,0,0,0,0,0,0,0.0927680981618513,0,0,0,0,0,0.254253650292766,0,0.344743373241465,0.291604613383254,0,0,0.723578631752448,0,0,0,0.219385397153973,0,0,0,0,0,0,0,0,0,0,0,0,0,2.03036094555463,2.54881294613061,3.85989650044438,0.569261198172555,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.063186579628488,0.300646838828985,0,0,0,0,0,0,0,0,0.0979923974143777,0,0,0,0,0,0,0.0969890164884194,0,0,0.411125773940253,0,0.126621591911757,0,0,0,0.19980960958213,0,0,0,0,0.745515213392595,0,0,0,0.203996435272644,0,0,0,0,0,0,0,0,1.43574604915363,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.2249738915515,0,0.121499113316049,0,0.0788057072991982,0,0,1.43429871466276,0,0,0,0,0,0,0,0,0.738832686744051,0.340776043570843,0,0,0,0.129282956361551,0,0,0,0.213574825135389,0,0,0,0,0,0,0,0,0,0,0,0,0.122026264901963,0.250381861413,0,0,0,0,0,0,0,0.705797459094515,0,0,0,0,0,0,0,0,0,0,0.15543720058278,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.336749488765919,0,0,0,0,0,0,0,0.179088841081487,0,0,0,0,0,0,0,0,0.414775308455192,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.385375350578757,0,0.319267718114302,0.41023272848151,0,0.0691572524642179,0.161475645631851,0,0,0.11796972334774,0,0,0.381382095467167,0.690359926060101,0,0.150420656698515,0.20170506870352,0,0,0,0,0.135075169236789,0,0,0.317079050969534,0,0,0,0,0,0,0,0,0,0,0,0,0,0.263091094251396,0,0,0,0.628462359664008,0,0,0,0,0.0714765441766563,0,0,0,0,0,0,0,0,0,0,0,0,0,0.955538938977433,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0771741581079447,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.458729283404541,0,0,0.135982980381829,0,0,0,0,0,0,0,0,0,0,0,0,0.0757786982182394,0,0,0,0,0,0,0.0620747142958579,0,0,0,0,0,0,0.143444410785353,0,0.162806537221949,0,0,0,0,0,0,0.665756774185513,0.201273793591026,0 | |||
|short_description=p8@ITPR1 | |||
}} |
Latest revision as of 14:30, 18 September 2015
Short description: | p8@ITPR1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_8_at_ITPR1_5end |
Coexpression cluster: | C7_CD14_Eosinophils_Neutrophils_Smooth_Basophils_Macrophage_Mast |
Association with transcript: | 20bp_to_ENST00000478515_5end |
EntrezGene: | ITPR1 |
HGNC: | 6180 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
classical monocyte | 3.09e-115 | 42 |
CD14-positive, CD16-negative classical monocyte | 3.09e-115 | 42 |
defensive cell | 4.00e-100 | 48 |
phagocyte | 4.00e-100 | 48 |
monopoietic cell | 5.85e-79 | 59 |
monocyte | 5.85e-79 | 59 |
monoblast | 5.85e-79 | 59 |
promonocyte | 5.85e-79 | 59 |
macrophage dendritic cell progenitor | 3.15e-76 | 61 |
myeloid lineage restricted progenitor cell | 4.13e-70 | 66 |
granulocyte monocyte progenitor cell | 5.39e-69 | 67 |
myeloid leukocyte | 7.10e-64 | 72 |
myeloid cell | 1.27e-53 | 108 |
common myeloid progenitor | 1.27e-53 | 108 |
nongranular leukocyte | 4.88e-38 | 115 |
hematopoietic lineage restricted progenitor cell | 3.18e-36 | 120 |
hematopoietic oligopotent progenitor cell | 4.38e-34 | 161 |
hematopoietic multipotent progenitor cell | 4.38e-34 | 161 |
hematopoietic stem cell | 2.03e-32 | 168 |
leukocyte | 2.64e-31 | 136 |
hematopoietic cell | 1.82e-30 | 177 |
mesenchymal cell | 4.06e-12 | 354 |
connective tissue cell | 9.29e-12 | 361 |
motile cell | 1.72e-10 | 386 |
multi fate stem cell | 6.16e-09 | 427 |
somatic stem cell | 1.01e-08 | 433 |
stem cell | 1.91e-08 | 441 |
Ontology term | p-value | n |
---|---|---|
bone marrow | 2.95e-60 | 76 |
bone element | 1.75e-55 | 82 |
skeletal element | 4.29e-50 | 90 |
immune system | 2.61e-48 | 93 |
hematopoietic system | 1.42e-45 | 98 |
blood island | 1.42e-45 | 98 |
skeletal system | 1.48e-44 | 100 |
hemolymphoid system | 7.39e-41 | 108 |
musculoskeletal system | 1.97e-24 | 167 |
lateral plate mesoderm | 1.29e-20 | 203 |
connective tissue | 2.87e-11 | 371 |
mesoderm | 3.96e-11 | 315 |
mesoderm-derived structure | 3.96e-11 | 315 |
presumptive mesoderm | 3.96e-11 | 315 |