FFCP PHASE1:Hg19::chr7:43288717..43288757,+: Difference between revisions
From FANTOM5_SSTAR
m (moved FFCP PHASE1 hg19::chr7:43288717..43288757,+ to FFCP PHASE1:Hg19::chr7:43288717..43288757,+: NSchange) |
No edit summary |
||
(9 intermediate revisions by the same user not shown) | |||
Line 1: | Line 1: | ||
{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=23072 | |EntrezGene=23072 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=22195 | |HGNC=22195 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=0bp_to_ENST00000464944_5end | |||
|cluster_id=chr7:43288717..43288757,+ | |||
|description=CAGE_peak_3_at_HECW1_5end | |||
|id=chr7:43288717..43288757,+ | |||
|ontology_enrichment_celltype=CL:0000057!9.63e-13!75;CL:0000055!2.78e-11!180;CL:0002620!3.03e-09!23;CL:0000499!4.30e-09!27;CL:0000077!1.62e-08!19 | |||
|ontology_enrichment_celltype_v019=CL:0002552;4.48e-09;5!CL:0002620;4.23e-08;23!CL:0000077;1.12e-07;19!CL:0002540;5.26e-07;6 | |||
|ontology_enrichment_celltype_v019_2=CL:0002552,3.60e-09,5;CL:0002620,3.43e-08,23;CL:0000077,1.34e-07,19;CL:0000057,1.99e-07,76;CL:0002540,6.15e-07,6 | |||
|ontology_enrichment_development_v019=UBERON:0008947;2.80e-07;29 | |||
|ontology_enrichment_disease=DOID:305!6.29e-14!106;DOID:0050687!4.93e-13!143;DOID:162!3.83e-08!235;DOID:14566!1.90e-07!239 | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2=DOID:0050687,5.86e-13,143;DOID:305,2.09e-12,106;DOID:162,6.85e-12,235;DOID:14566,2.60e-11,239 | |||
|ontology_enrichment_uberon=UBERON:0003102!4.93e-11!95;UBERON:0001737!1.93e-08!9;UBERON:0001007!1.08e-07!155;UBERON:0001555!1.08e-07!155;UBERON:0007026!1.08e-07!155;UBERON:0002199!5.60e-07!45;UBERON:0002416!5.60e-07!45;UBERON:0002097!7.40e-07!40;UBERON:0000062!8.61e-07!511;UBERON:0000475!9.05e-07!365 | |||
|ontology_enrichment_uberon_v019=UBERON:0001737;1.24e-14;9!UBERON:0001557;1.24e-14;9!UBERON:0001434;5.05e-07;36!UBERON:0004765;8.06e-07;26 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001737,8.07e-15,9;UBERON:0003102,2.82e-08,99;UBERON:0001557,2.55e-07,19 | |||
|phase1_expression=0.181678379270557,0.642301571672949,0,0,0,0,0,0.631719873426831,0.522371256399677,0,0,0,0,3.46545788288131,1.32558950291166,0,0,0,0,0.492484232307152,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.16072558669708,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.0843174571537,2.50668955317945,1.15877215168659,3.1811437882044,0.486634870302636,0.567208902984407,0.221729397462564,0.175669571386252,0.196468613246569,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.35576626268671,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.12663051166458,1.05927344650575,1.72101972449288,0,0,0,0,0,0.134710672069688,0,1.21085942115945,0.576175924479999,0,0,1.1409436430889,1.34503812496621,0,0.323745888736263,0.140450806702248,4.69554593886255,2.45668634623536,3.51307655997603,3.56400857184616,1.7308685049499,0,0,3.70339450698946,0.750711119231785,6.64953877162039,2.19488810440419,0.919463387397059,0.600952235626387,0,3.22901344239952,0.640672166455702,0.847727604638247,4.20127534518163,1.95799805553034,3.60696756063881,1.8611685633159,0.843881661206331,0.487185025805993,5.3011092591264,0.920498986422993,0,5.68015348026583,1.30977727695932,1.52604533079439,0.57978255948989,0,0.286804595389004,0,0,0,0,0,0,3.12899064659632,1.28648187638577,1.38134921352481,0,0.721879481669586,3.90412440131485,2.86593973132773,3.61516544825223,2.20587945464788,1.74303555273925,2.13543557199987,3.37078270400411,2.74710051175484,2.30848294167834,0,0,0.4115740113314,0,0,0,0,0,1.10689594688802,0.514703430895577,0,0,0,0,0,3.11980435583874,0,0.115930404975077,0,0,0,0,0,0,0,0,0,0,0,0,0,0.290633938513962,0,0,0,0,0,0,0.063497894292169,0.763976851116555,0,0,0.102827492703324,0,0,2.46688385559794,0.43596006883328,0.8800594298514,0,0,0.845302752556,1.06375246633948,1.04007436911366,2.57207374262142,0,1.0656887160644,0.142977993658148,0,0.823240336780769,0.325736184293735,0,0.791951872933429,0.301439377059586,0,0.199945982364114,0,0,0,0.479249710983165,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.8403723757871,2.50085260529839,0.271265023699736,0,0,0,0,0,0,0,0,0.184369168541703,2.5196248195744,0.587403472388222,0.343143423810856,0,0,0,0,0,0,0.248107807818777,0.767309866440312,0.280660094433074,0,0,0,0,0.154209693802656,0,0.246381468041427,0,0.348631135379878,0,0,0,1.60740227430449,0,2.49136388422906,0,0,0,1.46139224653261,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,4.67004270573551,4.7855509953941,0,0.650060246036521,0,0.193341436584244,0.154048617114644,0.15350367472613,0,1.6113036730241,0.290033387828457,0.511359764496605,0,0,0,0,0,0.464845549297286,1.25924938732256,0,0.308033580176089,0,0,0.18532421910392,0,3.72158369359667,0.316379424718726,0.190630193923825,1.535386747868,0.42793898803392,0,0,0.899362287916574,0.274537029736055,0.117812402345686,0.202182481573316,0,0,0.48763373908959,0,0,0.136499911407986,2.54529777516683,0,0,0,0,2.31510213706675,0.655894752046633,0,0,0,0.143411352204052,0,0,0.354761064070598,0.422215270595328,1.64647446479951,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.245040215981032,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.11362469558097,0,0,0,0,0.748562161632879,0.73254089635947,0,6.6866030566487,0.284136146806413,0,0,0,0,0,0,0,0,0.19924798825107,0.276283915531148,0,0.102268682502155,0,0,0,2.86433879480975,0,0.394573622547734,0,1.11136990144637,0,0.278304294485554,0,0,0,0,0.682760689712998,0.254253650292766,0.472775363535873,0,0,0,0,0,0,0.110579259931225,0.295547618953547,0.438770794307945,4.13966161372163,0,0,0.455768223388005,1.84451123510448,0,0,0.638002319463839,0.457987967009312,0,0,0,0,0,0,0,0.189753732724185,0,2.53197677433632,0,1.27217764290547,0,0.995261931078505,0.353830258013357,0,0,0,0,0.202203398942031,0,0,0,0.19566461893209,3.88448607254548,0,0,0,0.63186579628488,0,0,0,0,0,0,2.27687636823834,0.138674673013139,0,0.0979923974143777,3.91766429611812,0,0.343972064943233,1.83837029449262,1.5348756588099,1.97077096927702,0.290967049465258,0,0,0.274083849293502,0.993573058514948,0.0633107959558787,0.586654148204409,2.72539988855215,0,0.39961921916426,0,0,0,0,2.11229310461235,0.707082103850386,4.21303038828204,4.91633377667966,9.99582532835954,9.2464188768486,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.393709926058995,0,0,0,0.160753148465019,0,0,0,0,0.0607495566580247,0,0,0,0,6.45434421598241,0.191915197319445,0,0,0,0,0,0,0,0,2.72620834856675,1.01980882368113,0,0,0,0,9.75194975940678,1.40963004463334,0.106787412567695,0,0.414239055347196,0,0,0,0,0,0,0,0.327872630709804,0,0,0.122026264901963,0,0,0.110929051536852,0.248385611765534,0,2.12466693535581,0,3.71104933608458,0.235265819698172,0,0,0,0,0,2.08343305802598,1.76097531226803,6.22867855117575,1.14420034198462,0.302461847526478,0.932623203496683,0,0,0,0,0,0,0,0,0.380805212168795,0,0.181848659202559,0,0,1.19428766609585,0,0.343395705182793,0,0,0.192619830407303,2.35885750512418,0.521988583930423,4.98753036126999,6.25110680674352,1.46842022703881,0.179088841081487,13.2784622279218,6.35923743778251,0.176689145945881,1.15748422962549,0.168942440653073,3.58738126023125,2.41801239211839,2.12701969324168,0,0,0,0,6.55219697692825,1.2288645437686,0,0,0,0,0,3.49801305478497,0,0,0,0,0,0,0,0,0,0,0,0,0,0,4.593682160298,0.0642292250964595,0,0.159633859057151,0,0,0.0691572524642179,0,0,2.35554524402461,0.11796972334774,0.366857197043358,1.73288499225507,0,0.690359926060101,0.198916222116275,0,1.0085253435176,0,0,0,0,0.270150338473579,0,0,0.317079050969534,0,0,1.48863353516788,0,0,0.535701835878287,0,1.21393120847326,0,0,0,0.171488009437418,0.40781839786099,0.0657727735628491,4.96414131712666,0.444925607568277,0.470958557103084,0,0,0,0.215927591218621,1.9110067515482,0.142953088353313,0,0,0,0,0,0,0,0,0,0,0,0.22910686854405,2.17144469965024,5.7332336338646,1.00669888618013,0,0.243835849964539,0,0.307988420568741,0,0,0,0,0,0.11294608203896,0,0.301925687133347,0.0771741581079447,0,0,0,1.17838273550813,0.196308467114945,0.297046400327086,0.8453114551668,0.509781344063451,0,0,0,1.2498775702396,0.705789743431384,0.561689566824178,0,0,0.143339583151451,0,0.135982980381829,0,0,0.371995018166751,0.924351257262837,0.432626562123789,0,2.73163929909239,0,0.305966489225945,1.3360870263278,2.6649520865105,0,0.227336094654718,0.267964130156178,0,0,0.213233981900981,0,0,0,0.224263725161227,0,0,0.653150243690884,0,0,0.143444410785353,0,0.407016343054873,1.70763753404345,0,0.0898252021065869,0,0,0,0,0,0 | |phase1_expression=0.181678379270557,0.642301571672949,0,0,0,0,0,0.631719873426831,0.522371256399677,0,0,0,0,3.46545788288131,1.32558950291166,0,0,0,0,0.492484232307152,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.16072558669708,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.0843174571537,2.50668955317945,1.15877215168659,3.1811437882044,0.486634870302636,0.567208902984407,0.221729397462564,0.175669571386252,0.196468613246569,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.35576626268671,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.12663051166458,1.05927344650575,1.72101972449288,0,0,0,0,0,0.134710672069688,0,1.21085942115945,0.576175924479999,0,0,1.1409436430889,1.34503812496621,0,0.323745888736263,0.140450806702248,4.69554593886255,2.45668634623536,3.51307655997603,3.56400857184616,1.7308685049499,0,0,3.70339450698946,0.750711119231785,6.64953877162039,2.19488810440419,0.919463387397059,0.600952235626387,0,3.22901344239952,0.640672166455702,0.847727604638247,4.20127534518163,1.95799805553034,3.60696756063881,1.8611685633159,0.843881661206331,0.487185025805993,5.3011092591264,0.920498986422993,0,5.68015348026583,1.30977727695932,1.52604533079439,0.57978255948989,0,0.286804595389004,0,0,0,0,0,0,3.12899064659632,1.28648187638577,1.38134921352481,0,0.721879481669586,3.90412440131485,2.86593973132773,3.61516544825223,2.20587945464788,1.74303555273925,2.13543557199987,3.37078270400411,2.74710051175484,2.30848294167834,0,0,0.4115740113314,0,0,0,0,0,1.10689594688802,0.514703430895577,0,0,0,0,0,3.11980435583874,0,0.115930404975077,0,0,0,0,0,0,0,0,0,0,0,0,0,0.290633938513962,0,0,0,0,0,0,0.063497894292169,0.763976851116555,0,0,0.102827492703324,0,0,2.46688385559794,0.43596006883328,0.8800594298514,0,0,0.845302752556,1.06375246633948,1.04007436911366,2.57207374262142,0,1.0656887160644,0.142977993658148,0,0.823240336780769,0.325736184293735,0,0.791951872933429,0.301439377059586,0,0.199945982364114,0,0,0,0.479249710983165,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.8403723757871,2.50085260529839,0.271265023699736,0,0,0,0,0,0,0,0,0.184369168541703,2.5196248195744,0.587403472388222,0.343143423810856,0,0,0,0,0,0,0.248107807818777,0.767309866440312,0.280660094433074,0,0,0,0,0.154209693802656,0,0.246381468041427,0,0.348631135379878,0,0,0,1.60740227430449,0,2.49136388422906,0,0,0,1.46139224653261,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,4.67004270573551,4.7855509953941,0,0.650060246036521,0,0.193341436584244,0.154048617114644,0.15350367472613,0,1.6113036730241,0.290033387828457,0.511359764496605,0,0,0,0,0,0.464845549297286,1.25924938732256,0,0.308033580176089,0,0,0.18532421910392,0,3.72158369359667,0.316379424718726,0.190630193923825,1.535386747868,0.42793898803392,0,0,0.899362287916574,0.274537029736055,0.117812402345686,0.202182481573316,0,0,0.48763373908959,0,0,0.136499911407986,2.54529777516683,0,0,0,0,2.31510213706675,0.655894752046633,0,0,0,0.143411352204052,0,0,0.354761064070598,0.422215270595328,1.64647446479951,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.245040215981032,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.11362469558097,0,0,0,0,0.748562161632879,0.73254089635947,0,6.6866030566487,0.284136146806413,0,0,0,0,0,0,0,0,0.19924798825107,0.276283915531148,0,0.102268682502155,0,0,0,2.86433879480975,0,0.394573622547734,0,1.11136990144637,0,0.278304294485554,0,0,0,0,0.682760689712998,0.254253650292766,0.472775363535873,0,0,0,0,0,0,0.110579259931225,0.295547618953547,0.438770794307945,4.13966161372163,0,0,0.455768223388005,1.84451123510448,0,0,0.638002319463839,0.457987967009312,0,0,0,0,0,0,0,0.189753732724185,0,2.53197677433632,0,1.27217764290547,0,0.995261931078505,0.353830258013357,0,0,0,0,0.202203398942031,0,0,0,0.19566461893209,3.88448607254548,0,0,0,0.63186579628488,0,0,0,0,0,0,2.27687636823834,0.138674673013139,0,0.0979923974143777,3.91766429611812,0,0.343972064943233,1.83837029449262,1.5348756588099,1.97077096927702,0.290967049465258,0,0,0.274083849293502,0.993573058514948,0.0633107959558787,0.586654148204409,2.72539988855215,0,0.39961921916426,0,0,0,0,2.11229310461235,0.707082103850386,4.21303038828204,4.91633377667966,9.99582532835954,9.2464188768486,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.393709926058995,0,0,0,0.160753148465019,0,0,0,0,0.0607495566580247,0,0,0,0,6.45434421598241,0.191915197319445,0,0,0,0,0,0,0,0,2.72620834856675,1.01980882368113,0,0,0,0,9.75194975940678,1.40963004463334,0.106787412567695,0,0.414239055347196,0,0,0,0,0,0,0,0.327872630709804,0,0,0.122026264901963,0,0,0.110929051536852,0.248385611765534,0,2.12466693535581,0,3.71104933608458,0.235265819698172,0,0,0,0,0,2.08343305802598,1.76097531226803,6.22867855117575,1.14420034198462,0.302461847526478,0.932623203496683,0,0,0,0,0,0,0,0,0.380805212168795,0,0.181848659202559,0,0,1.19428766609585,0,0.343395705182793,0,0,0.192619830407303,2.35885750512418,0.521988583930423,4.98753036126999,6.25110680674352,1.46842022703881,0.179088841081487,13.2784622279218,6.35923743778251,0.176689145945881,1.15748422962549,0.168942440653073,3.58738126023125,2.41801239211839,2.12701969324168,0,0,0,0,6.55219697692825,1.2288645437686,0,0,0,0,0,3.49801305478497,0,0,0,0,0,0,0,0,0,0,0,0,0,0,4.593682160298,0.0642292250964595,0,0.159633859057151,0,0,0.0691572524642179,0,0,2.35554524402461,0.11796972334774,0.366857197043358,1.73288499225507,0,0.690359926060101,0.198916222116275,0,1.0085253435176,0,0,0,0,0.270150338473579,0,0,0.317079050969534,0,0,1.48863353516788,0,0,0.535701835878287,0,1.21393120847326,0,0,0,0.171488009437418,0.40781839786099,0.0657727735628491,4.96414131712666,0.444925607568277,0.470958557103084,0,0,0,0.215927591218621,1.9110067515482,0.142953088353313,0,0,0,0,0,0,0,0,0,0,0,0.22910686854405,2.17144469965024,5.7332336338646,1.00669888618013,0,0.243835849964539,0,0.307988420568741,0,0,0,0,0,0.11294608203896,0,0.301925687133347,0.0771741581079447,0,0,0,1.17838273550813,0.196308467114945,0.297046400327086,0.8453114551668,0.509781344063451,0,0,0,1.2498775702396,0.705789743431384,0.561689566824178,0,0,0.143339583151451,0,0.135982980381829,0,0,0.371995018166751,0.924351257262837,0.432626562123789,0,2.73163929909239,0,0.305966489225945,1.3360870263278,2.6649520865105,0,0.227336094654718,0.267964130156178,0,0,0.213233981900981,0,0,0,0.224263725161227,0,0,0.653150243690884,0,0,0.143444410785353,0,0.407016343054873,1.70763753404345,0,0.0898252021065869,0,0,0,0,0,0 | ||
|short_description=p3@HECW1 | |||
}} | }} |
Latest revision as of 15:24, 18 September 2015
Short description: | p3@HECW1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_3_at_HECW1_5end |
Coexpression cluster: | NA |
Association with transcript: | 0bp_to_ENST00000464944_5end |
EntrezGene: | HECW1 |
HGNC: | 22195 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
fibroblast of gingiva | 3.60e-09 | 5 |
skin fibroblast | 3.43e-08 | 23 |
mesothelial cell | 1.34e-07 | 19 |
fibroblast | 1.99e-07 | 76 |
mesenchymal stem cell of the bone marrow | 6.15e-07 | 6 |
Ontology term | p-value | n |
---|---|---|
larynx | 8.07e-15 | 9 |
surface structure | 2.82e-08 | 99 |
upper respiratory tract | 2.55e-07 | 19 |
Ontology term | p-value | n |
---|---|---|
cell type cancer | 5.86e-13 | 143 |
carcinoma | 2.09e-12 | 106 |
cancer | 6.85e-12 | 235 |
disease of cellular proliferation | 2.60e-11 | 239 |