FFCP PHASE1:Hg19::chr17:12453278..12453291,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=284034 | |EntrezGene=284034 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_ncRNA | |||
|HGNC= | |HGNC= | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=0bp_to_ENST00000313495,NR_034144,NR_034145,uc002gnl.1,uc002gnm.1_5end | |association_with_transcript=0bp_to_ENST00000313495,NR_034144,NR_034145,uc002gnl.1,uc002gnm.1_5end | ||
|cluster_id=chr17:12453278..12453291,+ | |||
|description=CAGE_peak_1_at_FLJ34690_5end | |description=CAGE_peak_1_at_FLJ34690_5end | ||
|id=chr17:12453278..12453291,+ | |id=chr17:12453278..12453291,+ | ||
|ontology_enrichment_celltype=CL:0000359!1.26e-08!32;CL:0002594!3.39e-08!4;CL:0000192!1.08e-07!42;CL:0000514!1.08e-07!42 | |ontology_enrichment_celltype=CL:0000359!1.26e-08!32;CL:0002594!3.39e-08!4;CL:0000192!1.08e-07!42;CL:0000514!1.08e-07!42 | ||
|ontology_enrichment_celltype_v019=CL:0002589;3.37e-17;2!CL:0000359;2.11e-10;32!CL:0000222;1.02e-09;1!CL:0002594;8.20e-09;4!CL:0002595;3.23e-07;5!CL:0000192;8.99e-07;43 | |||
|ontology_enrichment_celltype_v019_2=CL:0002589,3.12e-17,2;CL:0000359,2.01e-11,32;CL:0002594,6.22e-09,4;CL:0000192,2.65e-08,43;CL:0000514,2.65e-08,43;CL:0002595,3.45e-07,5 | |||
|ontology_enrichment_development_v019=UBERON:0004874;1.43e-09;1!UBERON:0004140;3.25e-09;1!UBERON:0005062;4.33e-09;4!UBERON:0007284;4.33e-09;4!CL:0000514;8.99e-07;43 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019=DOID:3369;1.43e-09;1!DOID:3571;1.43e-09;1!DOID:2513;3.25e-09;1 | |||
|ontology_enrichment_disease_v019_2=DOID:3369,1.21e-09,1;DOID:3571,1.32e-09,1;DOID:2513,1.99e-09,1 | |||
|ontology_enrichment_uberon=UBERON:0007023!1.76e-12!115;UBERON:0004872!5.93e-10!84;UBERON:0001981!1.12e-09!60;UBERON:0007500!1.12e-09!60;UBERON:0004537!1.12e-09!60;UBERON:0006965!1.12e-09!60;UBERON:0000481!9.77e-09!347;UBERON:0001310!3.39e-08!4;UBERON:0002049!3.70e-08!79;UBERON:0007798!3.70e-08!79;UBERON:0001637!9.27e-08!42;UBERON:0003509!9.27e-08!42;UBERON:0004572!9.27e-08!42;UBERON:0000055!1.20e-07!69;UBERON:0002385!2.08e-07!63;UBERON:0001015!2.08e-07!63;UBERON:0000383!2.08e-07!63;UBERON:0003104!2.49e-07!238;UBERON:0009142!2.49e-07!238;UBERON:0003978!5.38e-07!3;UBERON:0009751!5.38e-07!3;UBERON:0000946!5.38e-07!3;UBERON:0002523!5.38e-07!3;UBERON:0005983!5.38e-07!3;UBERON:0002165!5.38e-07!3;UBERON:0002062!5.38e-07!3;UBERON:0007280!5.38e-07!3 | |||
|ontology_enrichment_uberon_v019=UBERON:0001529;3.37e-17;2!UBERON:0007204;3.37e-17;2!UBERON:0003978;7.91e-12;3!UBERON:0000946;7.91e-12;3!UBERON:0001637;8.19e-10;42!UBERON:0003509;8.19e-10;42!UBERON:0004572;8.19e-10;42!UBERON:0002146;8.67e-10;1!UBERON:0005623;8.67e-10;1!UBERON:0004573;1.12e-09;33!UBERON:0004571;1.12e-09;33!UBERON:0000989;1.43e-09;1!UBERON:0008811;1.43e-09;1!UBERON:0002135;3.25e-09;1!UBERON:0001310;8.20e-09;4!UBERON:0003834;3.23e-07;5!UBERON:0001533;3.23e-07;5 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001529,3.12e-17,2;UBERON:0007204,3.12e-17,2;UBERON:0007500,1.45e-14,59;UBERON:0001981,1.45e-14,59;UBERON:0004537,1.45e-14,59;UBERON:0006965,1.45e-14,59;UBERON:0001637,4.79e-14,42;UBERON:0003509,4.79e-14,42;UBERON:0004572,4.79e-14,42;UBERON:0000055,2.14e-12,68;UBERON:0003978,6.73e-12,3;UBERON:0009751,6.73e-12,3;UBERON:0000946,6.73e-12,3;UBERON:0002523,6.73e-12,3;UBERON:0005983,6.73e-12,3;UBERON:0002165,6.73e-12,3;UBERON:0002062,6.73e-12,3;UBERON:0007280,6.73e-12,3;UBERON:0004872,9.56e-12,83;UBERON:0004573,4.27e-11,33;UBERON:0004571,4.27e-11,33;UBERON:0004797,6.51e-11,7;UBERON:0002049,1.43e-10,78;UBERON:0007798,1.43e-10,78;UBERON:0002146,8.68e-10,1;UBERON:0005623,8.68e-10,1;UBERON:0000989,1.56e-09,1;UBERON:0008811,1.56e-09,1;UBERON:0006258,1.56e-09,1;UBERON:0005876,1.56e-09,1;UBERON:0004874,1.56e-09,1;UBERON:0002135,2.55e-09,1;UBERON:0003914,3.10e-09,117;UBERON:0001310,6.22e-09,4;UBERON:0004535,1.87e-08,109;UBERON:0001009,3.58e-08,112;UBERON:0003834,3.45e-07,5;UBERON:0001533,3.45e-07,5;UBERON:0002385,6.93e-07,64;UBERON:0001015,6.93e-07,64;UBERON:0000383,6.93e-07,64 | |||
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| ||
|short_description=p1@FLJ34690 | |short_description=p1@FLJ34690 | ||
}} | }} |
Latest revision as of 16:11, 18 September 2015
Short description: | p1@FLJ34690 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_FLJ34690_5end |
Coexpression cluster: | NA |
Association with transcript: | 0bp_to_ENST00000313495, NR_034144, NR_034145, uc002gnl.1, uc002gnm.1_5end |
EntrezGene: | FLJ34690 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
smooth muscle cell of the brachiocephalic vasculature | 3.12e-17 | 2 |
vascular associated smooth muscle cell | 2.01e-11 | 32 |
smooth muscle cell of the umbilical artery | 6.22e-09 | 4 |
smooth muscle cell | 2.65e-08 | 43 |
smooth muscle myoblast | 2.65e-08 | 43 |
smooth muscle cell of the subclavian artery | 3.45e-07 | 5 |
Ontology term | p-value | n |
---|---|---|
peripheral primitive neuroectodermal tumor | 1.21e-09 | 1 |
liver cancer | 1.32e-09 | 1 |
basal cell carcinoma | 1.99e-09 | 1 |