FFCP PHASE1:Hg19::chr15:66784435..66784467,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=10302 | |EntrezGene=10302 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_ncRNA | |||
|HGNC=15484 | |HGNC=15484 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=-29bp_to_uc002apt.1_5end | |association_with_transcript=-29bp_to_uc002apt.1_5end | ||
|cluster_id=chr15:66784435..66784467,- | |||
|coexpression_cluster_id=C1 | |coexpression_cluster_id=C1 | ||
|description=CAGE_peak_4_at_SNAPC5_5end | |description=CAGE_peak_4_at_SNAPC5_5end | ||
Line 9: | Line 14: | ||
|ontology_enrichment_celltype= | |ontology_enrichment_celltype= | ||
|ontology_enrichment_celltype_v019=CL:0002615;1.12e-17;3 | |ontology_enrichment_celltype_v019=CL:0002615;1.12e-17;3 | ||
|ontology_enrichment_celltype_v019_2=CL:0002615,1.12e-17,3 | |||
|ontology_enrichment_development_v019=UBERON:0009117;7.35e-21;10!UBERON:0005564;7.35e-21;10 | |ontology_enrichment_development_v019=UBERON:0009117;7.35e-21;10!UBERON:0005564;7.35e-21;10 | ||
|ontology_enrichment_disease=DOID:5409!2.60e-10!4;DOID:169!3.57e-07!6 | |ontology_enrichment_disease=DOID:5409!2.60e-10!4;DOID:169!3.57e-07!6 | ||
|ontology_enrichment_disease_v019= | |ontology_enrichment_disease_v019= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0001301!6.14e-11!1;UBERON:0003135!1.36e-08!11;UBERON:0000013!1.93e-08!5;UBERON:0002410!1.93e-08!5 | |ontology_enrichment_uberon=UBERON:0001301!6.14e-11!1;UBERON:0003135!1.36e-08!11;UBERON:0000013!1.93e-08!5;UBERON:0002410!1.93e-08!5 | ||
|ontology_enrichment_uberon_v019=UBERON:0000473;9.21e-26;8!UBERON:0003135;4.48e-19;11!UBERON:0000991;1.57e-10;21!UBERON:0003101;4.23e-10;22!UBERON:0000079;4.23e-10;22!UBERON:0003688;1.57e-09;6!UBERON:0002358;1.57e-09;6!UBERON:0003684;1.57e-09;6!UBERON:0001178;1.57e-09;6!UBERON:0004457;8.85e-07;9!UBERON:0000042;8.85e-07;9 | |ontology_enrichment_uberon_v019=UBERON:0000473;9.21e-26;8!UBERON:0003135;4.48e-19;11!UBERON:0000991;1.57e-10;21!UBERON:0003101;4.23e-10;22!UBERON:0000079;4.23e-10;22!UBERON:0003688;1.57e-09;6!UBERON:0002358;1.57e-09;6!UBERON:0003684;1.57e-09;6!UBERON:0001178;1.57e-09;6!UBERON:0004457;8.85e-07;9!UBERON:0000042;8.85e-07;9 | ||
|ontology_enrichment_uberon_v019_2=UBERON:0000473,8.65e-26,8;UBERON:0003135,4.28e-19,11;UBERON:0002323,1.35e-10,46;UBERON:0000991,1.53e-10,21;UBERON:0009196,1.53e-10,21;UBERON:0009117,1.53e-10,21;UBERON:0005564,1.53e-10,21;UBERON:0004176,4.14e-10,22;UBERON:0003101,4.14e-10,22;UBERON:0000079,4.14e-10,22;UBERON:0004458,5.30e-10,49;UBERON:0003688,1.57e-09,6;UBERON:0002358,1.57e-09,6;UBERON:0003684,1.57e-09,6;UBERON:0001178,1.57e-09,6;UBERON:0003886,3.71e-09,54;UBERON:0002553,3.34e-08,61 | |||
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|short_description=p4@SNAPC5 | |short_description=p4@SNAPC5 | ||
}} | }} |
Latest revision as of 16:23, 18 September 2015
Short description: | p4@SNAPC5 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_4_at_SNAPC5_5end |
Coexpression cluster: | C1_testis_epididymis_embryonic_medulla_pituitary_trachea_caudate |
Association with transcript: | -29bp_to_uc002apt.1_5end |
EntrezGene: | SNAPC5 |
HGNC: | 15484 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
adipocyte of omentum tissue | 1.12e-17 | 3 |
Ontology term | p-value | n |
---|---|---|
testis | 8.65e-26 | 8 |
male reproductive organ | 4.28e-19 | 11 |
body cavity | 1.35e-10 | 46 |
gonad | 1.53e-10 | 21 |
indifferent external genitalia | 1.53e-10 | 21 |
indifferent gonad | 1.53e-10 | 21 |
gonad primordium | 1.53e-10 | 21 |
external genitalia | 4.14e-10 | 22 |
male organism | 4.14e-10 | 22 |
male reproductive system | 4.14e-10 | 22 |
body cavity or lining | 5.30e-10 | 49 |
omentum | 1.57e-09 | 6 |
peritoneum | 1.57e-09 | 6 |
abdominal cavity | 1.57e-09 | 6 |
visceral peritoneum | 1.57e-09 | 6 |
body cavity precursor | 3.71e-09 | 54 |
anatomical cavity | 3.34e-08 | 61 |