FFCP PHASE1:Hg19::chr17:12921270..12921359,-: Difference between revisions
From FANTOM5_SSTAR
m (moved FFCP PHASE1 hg19::chr17:12921270..12921359,- to FFCP PHASE1:Hg19::chr17:12921270..12921359,-: NSchange) |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=60528 | |EntrezGene=60528 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=14198 | |HGNC=14198 | ||
|TSSclassifier=strong | |||
|UniProt=Q9BQ52,G5E9D5 | |UniProt=Q9BQ52,G5E9D5 | ||
|association_with_transcript=0bp_to_ENST00000338034,ENST00000395962,uc002gnz.3,uc010vvp.1,uc010vvq.1,uc010vvr.1_5end | |||
|cluster_id=chr17:12921270..12921359,- | |||
|description=CAGE_peak_1_at_ELAC2_5end | |||
|id=chr17:12921270..12921359,- | |||
|ontology_enrichment_celltype=CL:0002321!1.46e-14!248;CL:0000220!6.02e-14!246;CL:0000222!2.28e-12!119;CL:0000548!9.50e-12!679;CL:0000004!9.50e-12!679;CL:0000255!9.50e-12!679;CL:0000012!9.76e-12!682;CL:0000115!2.00e-11!35;CL:0002078!2.50e-11!44;CL:0000144!6.61e-11!625;CL:0000055!6.16e-10!180;CL:0000066!7.20e-10!254;CL:0002371!2.07e-09!591;CL:0000213!2.50e-09!57;CL:0000215!2.50e-09!57;CL:0002139!2.25e-08!24;CL:0000003!5.47e-08!722;CL:0000071!2.24e-07!18;CL:0002546!2.24e-07!18 | |||
|ontology_enrichment_celltype_v019=CL:0000115;3.19e-10;36!CL:0002139;2.40e-08;24!CL:0002078;2.73e-08;45!CL:0000071;2.32e-07;18!CL:1000449;2.91e-07;15 | |||
|ontology_enrichment_celltype_v019_2=CL:0002321,1.26e-14,250;CL:0000222,2.28e-12,121;CL:0000115,6.54e-12,36;CL:0002078,8.58e-12,45;CL:0000066,4.35e-10,253;CL:0000213,9.76e-10,58;CL:0000215,9.76e-10,58;CL:0002139,2.25e-08,24;CL:0000071,2.24e-07,18;CL:0002546,2.24e-07,18;CL:1000449,2.54e-07,15 | |||
|ontology_enrichment_development_v019=CL:0002546;2.32e-07;18 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002049!2.21e-11!79;UBERON:0007798!2.21e-11!79;UBERON:0000055!3.29e-10!69;UBERON:0003914!6.50e-10!118;UBERON:0001981!1.08e-08!60;UBERON:0007500!1.08e-08!60;UBERON:0004537!1.08e-08!60;UBERON:0006965!1.08e-08!60;UBERON:0004872!1.10e-08!84;UBERON:0001637!6.84e-08!42;UBERON:0003509!6.84e-08!42;UBERON:0004572!6.84e-08!42;UBERON:0000487!1.76e-07!22;UBERON:0001986!2.24e-07!18;UBERON:0004638!2.24e-07!18;UBERON:0004852!2.24e-07!18;UBERON:0001009!2.90e-07!113 | |||
|ontology_enrichment_uberon_v019=UBERON:0003914;1.34e-07;74!UBERON:0000487;1.89e-07;22!UBERON:0004638;2.32e-07;18!UBERON:0001986;2.32e-07;18!UBERON:0004852;2.32e-07;18!UBERON:0006555;2.91e-07;15!UBERON:0004819;2.91e-07;15!UBERON:0001285;2.91e-07;15!UBERON:0007684;2.91e-07;15 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002049,7.96e-12,78;UBERON:0007798,7.96e-12,78;UBERON:0000055,1.17e-10,68;UBERON:0003914,3.06e-10,117;UBERON:0007500,3.96e-09,59;UBERON:0001981,3.96e-09,59;UBERON:0004537,3.96e-09,59;UBERON:0006965,3.96e-09,59;UBERON:0004872,4.86e-09,83;UBERON:0001637,6.84e-08,42;UBERON:0003509,6.84e-08,42;UBERON:0004572,6.84e-08,42;UBERON:0001009,1.59e-07,112;UBERON:0000487,1.76e-07,22;UBERON:0004638,2.24e-07,18;UBERON:0001986,2.24e-07,18;UBERON:0004852,2.24e-07,18;UBERON:0004211,2.54e-07,15;UBERON:0009773,2.54e-07,15;UBERON:0001231,2.54e-07,15;UBERON:0001285,2.54e-07,15;UBERON:0007684,2.54e-07,15;UBERON:0004208,2.54e-07,15;UBERON:0007503,3.20e-07,78;UBERON:0000490,4.13e-07,148;UBERON:0004535,8.24e-07,109 | |||
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| ||
|short_description=p1@ELAC2 | |||
}} | }} |
Latest revision as of 16:41, 18 September 2015
Short description: | p1@ELAC2 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_ELAC2_5end |
Coexpression cluster: | NA |
Association with transcript: | 0bp_to_ENST00000338034, ENST00000395962, uc002gnz.3, uc010vvp.1, uc010vvq.1, uc010vvr.1_5end |
EntrezGene: | ELAC2 |
HGNC: | 14198 |
UniProt: | Q9BQ52G5E9D5 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
embryonic cell | 1.26e-14 | 250 |
mesodermal cell | 2.28e-12 | 121 |
endothelial cell | 6.54e-12 | 36 |
meso-epithelial cell | 8.58e-12 | 45 |
epithelial cell | 4.35e-10 | 253 |
lining cell | 9.76e-10 | 58 |
barrier cell | 9.76e-10 | 58 |
endothelial cell of vascular tree | 2.25e-08 | 24 |
blood vessel endothelial cell | 2.24e-07 | 18 |
embryonic blood vessel endothelial progenitor cell | 2.24e-07 | 18 |
epithelial cell of nephron | 2.54e-07 | 15 |
Ontology term | p-value | n |
---|---|---|
vasculature | 7.96e-12 | 78 |
vascular system | 7.96e-12 | 78 |
vessel | 1.17e-10 | 68 |
epithelial tube | 3.06e-10 | 117 |
epithelial tube open at both ends | 3.96e-09 | 59 |
blood vessel | 3.96e-09 | 59 |
blood vasculature | 3.96e-09 | 59 |
vascular cord | 3.96e-09 | 59 |
splanchnic layer of lateral plate mesoderm | 4.86e-09 | 83 |
artery | 6.84e-08 | 42 |
arterial blood vessel | 6.84e-08 | 42 |
arterial system | 6.84e-08 | 42 |
circulatory system | 1.59e-07 | 112 |
simple squamous epithelium | 1.76e-07 | 22 |
blood vessel endothelium | 2.24e-07 | 18 |
endothelium | 2.24e-07 | 18 |
cardiovascular system endothelium | 2.24e-07 | 18 |
nephron epithelium | 2.54e-07 | 15 |
renal tubule | 2.54e-07 | 15 |
nephron tubule | 2.54e-07 | 15 |
nephron | 2.54e-07 | 15 |
uriniferous tubule | 2.54e-07 | 15 |
nephrogenic mesenchyme | 2.54e-07 | 15 |
epithelial vesicle | 3.20e-07 | 78 |
unilaminar epithelium | 4.13e-07 | 148 |
cardiovascular system | 8.24e-07 | 109 |