FFCP PHASE1:Hg19::chr11:61722718..61722729,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=7439 | |EntrezGene=7439 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=novel_coding | |||
|HGNC=12703 | |HGNC=12703 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=14bp_to_uc010rlv.1_5end | |association_with_transcript=14bp_to_uc010rlv.1_5end | ||
|cluster_id=chr11:61722718..61722729,+ | |||
|coexpression_cluster_id=C2 | |coexpression_cluster_id=C2 | ||
|description=CAGE_peak_12_at_BEST1_5end | |description=CAGE_peak_12_at_BEST1_5end | ||
|id=chr11:61722718..61722729,+ | |id=chr11:61722718..61722729,+ | ||
|ontology_enrichment_celltype=CL:0000766!2.99e-45!76;CL:0002057!6.24e-42!42;CL:0002194!2.48e-39!63;CL:0000576!2.48e-39!63;CL:0000040!2.48e-39!63;CL:0000559!2.48e-39!63;CL:0000860!4.80e-38!45;CL:0002009!1.54e-37!65;CL:0000839!1.31e-36!70;CL:0000557!8.07e-36!71;CL:0000763!8.93e-24!112;CL:0000049!8.93e-24!112;CL:0000738!3.46e-19!140;CL:0002087!1.15e-16!119;CL:0002031!3.82e-15!124;CL:0000037!6.29e-12!172;CL:0000566!6.29e-12!172;CL:0002032!6.90e-12!165;CL:0000837!6.90e-12!165;CL:0000988!2.85e-10!182;CL:0002320!9.96e-10!365;CL:0000134!1.22e-09!358;CL:0000094!3.19e-08!8;CL:0000048!5.55e-08!430;CL:0000723!1.74e-07!436;CL:0000034!7.39e-07!444 | |ontology_enrichment_celltype=CL:0000766!2.99e-45!76;CL:0002057!6.24e-42!42;CL:0002194!2.48e-39!63;CL:0000576!2.48e-39!63;CL:0000040!2.48e-39!63;CL:0000559!2.48e-39!63;CL:0000860!4.80e-38!45;CL:0002009!1.54e-37!65;CL:0000839!1.31e-36!70;CL:0000557!8.07e-36!71;CL:0000763!8.93e-24!112;CL:0000049!8.93e-24!112;CL:0000738!3.46e-19!140;CL:0002087!1.15e-16!119;CL:0002031!3.82e-15!124;CL:0000037!6.29e-12!172;CL:0000566!6.29e-12!172;CL:0002032!6.90e-12!165;CL:0000837!6.90e-12!165;CL:0000988!2.85e-10!182;CL:0002320!9.96e-10!365;CL:0000134!1.22e-09!358;CL:0000094!3.19e-08!8;CL:0000048!5.55e-08!430;CL:0000723!1.74e-07!436;CL:0000034!7.39e-07!444 | ||
|ontology_enrichment_celltype_v019=CL:0000860;1.86e-74;33!CL:0002057;1.86e-74;33!CL:0000473;1.06e-50;39!CL:0000234;1.06e-50;39!CL:0000576;5.35e-35;48!CL:0000766;4.92e-25;69!CL:0000775;1.73e-14;3!CL:0000094;1.96e-14;8!CL:0000763;1.19e-13;100!CL:0000771;1.53e-10;2!CL:0000081;2.10e-10;11!CL:0002087;4.91e-10;104!CL:0000738;3.68e-09;136 | |||
|ontology_enrichment_celltype_v019_2=CL:0000860,1.77e-67,42;CL:0002057,1.77e-67,42;CL:0000473,3.07e-58,48;CL:0000234,3.07e-58,48;CL:0000766,2.27e-53,72;CL:0002194,2.65e-45,59;CL:0000576,2.65e-45,59;CL:0000040,2.65e-45,59;CL:0000559,2.65e-45,59;CL:0002009,1.24e-43,61;CL:0000839,6.75e-40,66;CL:0000557,3.24e-39,67;CL:0000763,2.67e-33,108;CL:0000049,2.67e-33,108;CL:0000738,8.30e-27,136;CL:0002087,4.22e-22,115;CL:0000037,2.64e-20,168;CL:0002032,5.42e-20,161;CL:0000837,5.42e-20,161;CL:0002031,3.05e-19,120;CL:0000988,6.72e-19,177;CL:0000775,1.08e-14,3;CL:0000094,1.47e-14,8;CL:0000771,1.53e-10,2;CL:0000081,1.71e-10,11;CL:0000134,8.88e-08,354;CL:0002320,1.77e-07,361 | |||
|ontology_enrichment_development_v019=CL:0002057;3.79e-50;42!CL:0000049;1.32e-11;108 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002390!1.02e-40!102;UBERON:0003061!1.02e-40!102;UBERON:0002193!1.08e-37!112;UBERON:0002371!2.11e-32!80;UBERON:0001474!4.13e-30!86;UBERON:0004765!5.28e-25!101;UBERON:0001434!5.28e-25!101;UBERON:0002405!1.53e-22!115;UBERON:0003081!4.53e-20!216;UBERON:0002204!4.77e-17!167;UBERON:0000178!1.46e-09!15;UBERON:0000179!1.46e-09!15;UBERON:0000463!1.46e-09!15;UBERON:0002384!3.93e-09!375;UBERON:0000926!6.38e-09!448;UBERON:0004120!6.38e-09!448;UBERON:0006603!6.38e-09!448 | |ontology_enrichment_uberon=UBERON:0002390!1.02e-40!102;UBERON:0003061!1.02e-40!102;UBERON:0002193!1.08e-37!112;UBERON:0002371!2.11e-32!80;UBERON:0001474!4.13e-30!86;UBERON:0004765!5.28e-25!101;UBERON:0001434!5.28e-25!101;UBERON:0002405!1.53e-22!115;UBERON:0003081!4.53e-20!216;UBERON:0002204!4.77e-17!167;UBERON:0000178!1.46e-09!15;UBERON:0000179!1.46e-09!15;UBERON:0000463!1.46e-09!15;UBERON:0002384!3.93e-09!375;UBERON:0000926!6.38e-09!448;UBERON:0004120!6.38e-09!448;UBERON:0006603!6.38e-09!448 | ||
|ontology_enrichment_uberon_v019=UBERON:0000178;1.17e-27;15!UBERON:0000179;1.17e-27;15!UBERON:0000463;1.17e-27;15!UBERON:0002390;3.81e-11;32 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002390,1.21e-51,98;UBERON:0003061,1.21e-51,98;UBERON:0002193,3.65e-46,108;UBERON:0002371,7.01e-34,76;UBERON:0001474,5.74e-31,82;UBERON:0000178,7.86e-28,15;UBERON:0000179,7.86e-28,15;UBERON:0000463,7.86e-28,15;UBERON:0004765,1.11e-27,90;UBERON:0002405,1.35e-26,93;UBERON:0003081,2.28e-25,203;UBERON:0001434,2.61e-24,100;UBERON:0000926,2.31e-14,315;UBERON:0004120,2.31e-14,315;UBERON:0006603,2.31e-14,315;UBERON:0002204,4.05e-12,167;UBERON:0002384,4.53e-07,371 | |||
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| ||
|short_description=p12@BEST1 | |short_description=p12@BEST1 | ||
}} | }} |
Latest revision as of 17:42, 18 September 2015
Short description: | p12@BEST1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_12_at_BEST1_5end |
Coexpression cluster: | C2_Eosinophils_Neutrophils_CD14_Whole_Basophils_Peripheral_Mast |
Association with transcript: | 14bp_to_uc010rlv.1_5end |
EntrezGene: | BEST1 |
HGNC: | 12703 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
classical monocyte | 1.77e-67 | 42 |
CD14-positive, CD16-negative classical monocyte | 1.77e-67 | 42 |
defensive cell | 3.07e-58 | 48 |
phagocyte | 3.07e-58 | 48 |
myeloid leukocyte | 2.27e-53 | 72 |
monopoietic cell | 2.65e-45 | 59 |
monocyte | 2.65e-45 | 59 |
monoblast | 2.65e-45 | 59 |
promonocyte | 2.65e-45 | 59 |
macrophage dendritic cell progenitor | 1.24e-43 | 61 |
myeloid lineage restricted progenitor cell | 6.75e-40 | 66 |
granulocyte monocyte progenitor cell | 3.24e-39 | 67 |
myeloid cell | 2.67e-33 | 108 |
common myeloid progenitor | 2.67e-33 | 108 |
leukocyte | 8.30e-27 | 136 |
nongranular leukocyte | 4.22e-22 | 115 |
hematopoietic stem cell | 2.64e-20 | 168 |
hematopoietic oligopotent progenitor cell | 5.42e-20 | 161 |
hematopoietic multipotent progenitor cell | 5.42e-20 | 161 |
hematopoietic lineage restricted progenitor cell | 3.05e-19 | 120 |
hematopoietic cell | 6.72e-19 | 177 |
neutrophil | 1.08e-14 | 3 |
granulocyte | 1.47e-14 | 8 |
eosinophil | 1.53e-10 | 2 |
blood cell | 1.71e-10 | 11 |
mesenchymal cell | 8.88e-08 | 354 |
connective tissue cell | 1.77e-07 | 361 |
Ontology term | p-value | n |
---|---|---|
hematopoietic system | 1.21e-51 | 98 |
blood island | 1.21e-51 | 98 |
hemolymphoid system | 3.65e-46 | 108 |
bone marrow | 7.01e-34 | 76 |
bone element | 5.74e-31 | 82 |
blood | 7.86e-28 | 15 |
haemolymphatic fluid | 7.86e-28 | 15 |
organism substance | 7.86e-28 | 15 |
skeletal element | 1.11e-27 | 90 |
immune system | 1.35e-26 | 93 |
lateral plate mesoderm | 2.28e-25 | 203 |
skeletal system | 2.61e-24 | 100 |
mesoderm | 2.31e-14 | 315 |
mesoderm-derived structure | 2.31e-14 | 315 |
presumptive mesoderm | 2.31e-14 | 315 |
musculoskeletal system | 4.05e-12 | 167 |
connective tissue | 4.53e-07 | 371 |