FFCP PHASE1:Hg19::chr10:64893039..64893128,+: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=29982 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=19692 | |||
|TSSclassifier=strong | |||
|UniProt=Q96F24,C9JGX3,B4DWS0 | |||
|association_with_transcript=0bp_to_ENST00000277746,ENST00000395241,ENST00000435510_5end | |||
|cluster_id=chr10:64893039..64893128,+ | |||
|coexpression_cluster_id=C26 | |||
|description=CAGE_peak_1_at_NRBF2_5end | |||
|id=chr10:64893039..64893128,+ | |||
|ontology_enrichment_celltype=CL:0002009!3.02e-22!65;CL:0000766!1.25e-21!76;CL:0002194!1.38e-21!63;CL:0000576!1.38e-21!63;CL:0000040!1.38e-21!63;CL:0000559!1.38e-21!63;CL:0002057!7.76e-20!42;CL:0000557!7.06e-19!71;CL:0000860!5.83e-18!45;CL:0000839!1.38e-17!70;CL:0000738!6.31e-17!140;CL:0002087!2.54e-16!119;CL:0000048!5.90e-16!430;CL:0000134!8.99e-16!358;CL:0000723!1.44e-15!436;CL:0002320!2.72e-15!365;CL:0002031!3.26e-15!124;CL:0000034!3.71e-15!444;CL:0000763!1.71e-14!112;CL:0000049!1.71e-14!112;CL:0002032!1.08e-13!165;CL:0000837!1.08e-13!165;CL:0000037!3.56e-12!172;CL:0000566!3.56e-12!172;CL:0000219!1.12e-11!390;CL:0000144!2.27e-10!625;CL:0000988!2.51e-10!182;CL:0002371!3.73e-10!591;CL:0000003!2.46e-08!722;CL:0000063!1.43e-07!578;CL:0000548!3.69e-07!679;CL:0000004!3.69e-07!679;CL:0000255!3.69e-07!679 | |||
|ontology_enrichment_celltype_v019=CL:0000860;1.76e-18;33!CL:0002057;1.76e-18;33!CL:0000473;1.05e-17;39!CL:0000234;1.05e-17;39!CL:0000576;2.47e-13;48!CL:0000766;2.68e-10;69 | |||
|ontology_enrichment_celltype_v019_2=CL:0002009,2.82e-23,61;CL:0002194,1.27e-22,59;CL:0000576,1.27e-22,59;CL:0000040,1.27e-22,59;CL:0000559,1.27e-22,59;CL:0000473,1.85e-22,48;CL:0000234,1.85e-22,48;CL:0000766,1.91e-22,72;CL:0000860,7.76e-20,42;CL:0002057,7.76e-20,42;CL:0000557,1.23e-19,67;CL:0000839,2.71e-18,66;CL:0000738,3.54e-17,136;CL:0000048,6.69e-17,427;CL:0002087,1.25e-16,115;CL:0000723,1.69e-16,433;CL:0000134,2.15e-16,354;CL:0000034,4.54e-16,441;CL:0002320,6.75e-16,361;CL:0002031,1.77e-15,120;CL:0000763,8.75e-15,108;CL:0000049,8.75e-15,108;CL:0002032,7.85e-14,161;CL:0000837,7.85e-14,161;CL:0000037,2.79e-12,168;CL:0000219,3.55e-12,386;CL:0000988,1.09e-10,177 | |||
|ontology_enrichment_development_v019=CL:0002057;7.85e-15;42 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002390!3.91e-18!102;UBERON:0003061!3.91e-18!102;UBERON:0002193!3.62e-15!112;UBERON:0002371!7.93e-15!80;UBERON:0002384!2.49e-14!375;UBERON:0001474!9.87e-12!86;UBERON:0004765!1.28e-11!101;UBERON:0001434!1.28e-11!101;UBERON:0002204!1.54e-11!167;UBERON:0002405!1.54e-10!115;UBERON:0003081!5.81e-07!216 | |||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002390,1.41e-18,98;UBERON:0003061,1.41e-18,98;UBERON:0002193,1.78e-15,108;UBERON:0002371,2.62e-15,76;UBERON:0002384,6.63e-15,371;UBERON:0004765,3.96e-13,90;UBERON:0002204,4.02e-12,167;UBERON:0001474,4.72e-12,82;UBERON:0001434,6.18e-12,100;UBERON:0002405,6.74e-12,93;UBERON:0000926,2.78e-11,315;UBERON:0004120,2.78e-11,315;UBERON:0006603,2.78e-11,315;UBERON:0003081,1.79e-08,203 | |||
|phase1_expression=39.7875650602519,44.1047079215425,54.1264911728529,40.0293193412522,47.8248371037198,51.4679729219218,68.3909671054438,36.0080327853294,33.6929460377792,15.2355040630935,8.37361401566913,22.9363440736681,20.3100573235909,24.2582051801691,35.459519202887,34.9609076154923,28.3266428171269,33.5942641578192,33.1794303177545,8.74159512345194,7.14002419354885,9.71709636582072,15.170507317946,15.6036844583088,15.3162020305659,32.1700438198875,33.332839316678,33.4520820583137,27.9288636562722,22.2621050896383,29.5698795533705,30.3409004078046,22.5904439083688,43.6309731996809,27.8881922089086,20.4723694781887,11.7440175733939,29.9157520607214,34.8947338598047,45.355271979613,49.0374888585434,48.5840499028469,59.7575316911313,95.3812446393945,133.39020812215,118.623605920842,124.581963781447,160.766644216534,135.651390452055,106.733877551518,116.040800057683,109.018307978638,113.421328962348,109.086911525667,97.5070703479261,98.074258901697,120.897424475626,102.024461938068,92.4373354960126,83.4415470397843,75.4417808442869,130.62111487394,117.484094339141,132.982122166201,89.3844454976039,118.016126735757,125.810094297106,130.39805726825,142.364836728715,120.756997656045,89.5991263897386,85.8086891851026,80.6979087974255,31.4770376604793,39.9696083934282,35.6419697364239,39.8766640570058,37.8445769960596,44.6817131017883,23.9410704742649,33.6169184466462,38.3594722905731,28.1593991138116,30.0376236194172,32.9118423929515,40.1126409212517,31.230886988809,40.2326707968138,36.3574680031674,22.8972901088487,50.0907412816315,47.566212339046,53.518251937532,14.5388461436928,19.0572911413722,15.5396610017295,33.4406609193516,31.4408610199332,30.0178188539283,27.0842122532899,20.5331027979162,23.6723902867367,25.3274746930285,30.3036442727672,25.9253198577857,24.8117961933656,28.9760134228567,30.4857340947107,32.2547181948498,29.1055091148507,29.5694519030858,29.5599147449754,19.573826337392,19.5304804505491,18.8163942848958,27.7607889609037,21.8435681353095,20.2740192834752,22.7717722817553,20.7067519310663,22.1368374311182,32.3153695112447,28.3081223866213,22.1416837297144,37.4792179657038,25.3351659687098,19.7070719261051,24.7976294166421,28.6161009488353,31.2820712386846,51.199441925932,39.5713507225145,32.6049532701002,21.686349143074,24.5655576211586,28.5347642352823,53.2841584524236,66.1823423611585,21.3648686790793,23.0598573361067,19.2358180667946,15.2590622954835,9.4716774956061,14.8313777113772,54.8485095276415,55.373256461167,71.7972986801872,16.2173624527633,18.8758320557442,18.9443325678078,17.0935670335366,19.7853956874409,16.6627440771645,27.7000891542765,15.1019797035566,16.231964474464,15.8836174567976,20.414923974377,24.1921058626963,25.7734871828796,19.7386365383482,17.4862584315258,17.8165302010164,23.1627740617897,18.6332648012805,18.2171445699523,24.9227603615048,27.1393667964807,13.7984973719295,18.9853131913626,20.3353935762752,242.475968082356,221.034750564545,10.9023513035634,118.279324503486,29.8848007528408,29.3948381405346,26.3889691088909,24.826786753885,31.3979456079692,18.1473292740498,31.3267786489793,35.4780580355734,42.8379937181608,32.8558425258052,22.7036141467397,65.6840553907199,20.1516431377065,35.5862487586565,20.5369855756002,28.9930440270494,20.4336027640151,20.5578639347527,16.1518427707586,17.148950385411,14.9857867120357,29.964476540972,11.8800285728205,24.2321590692986,20.9337113245746,14.3723628363248,13.9718974581875,18.6426594609227,23.2733857006714,32.0453663243012,26.3579504387157,32.9021349005447,30.0595285374056,23.6794319109298,39.2945595426164,42.3863802319124,17.7053746689797,31.6371264762007,27.0522567047911,37.4094881226496,20.0843835367107,37.9029950077063,23.4763410047026,41.4224543890347,30.8743968523931,17.7504796258307,25.7925371462759,25.0949676619522,48.8949958503141,52.9127473946219,39.2922295682935,28.5418472343253,29.2890787990482,27.1893826314673,31.4092996696572,35.324919122588,29.5631660851422,20.3384392028761,21.8701918985581,16.5761905622977,41.7931135228781,33.2064561568009,11.8306800039844,12.1380976856233,13.2556066435915,14.007334537014,14.8158021982836,13.9989665275547,13.3482995078563,11.7732879075208,14.2356448070164,22.8828190933641,15.426595118379,8.6430542379594,7.3504355692771,70.9828195002253,112.042302701249,73.2579484284941,21.1902287719032,43.7838841213484,25.9067393550774,36.1078438994378,30.3484733795573,27.7459963856101,24.998880192803,16.9420318761369,11.4392826380754,18.7630744632855,21.7949161353144,36.9837386842838,18.4789053134174,18.5194205030644,24.5427856382632,26.8669495306154,12.0188062693282,45.7963631322559,60.6071046710626,54.2503742353858,47.8042553332563,74.0801185356971,60.3961914252566,58.7503908930685,50.5703053014294,12.2682457332868,102.966616720252,21.9240600692933,20.1108272074549,14.844355201947,19.0626074473834,37.0192723723345,21.7733402568218,15.2382681373061,23.9501424431787,22.7248758874345,39.0445975197093,34.5849983483,17.6045802422216,25.2856839923302,22.2215006037479,48.73543684068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| |||
|short_description=p1@NRBF2 | |||
}} |
Latest revision as of 20:16, 18 September 2015
Short description: | p1@NRBF2 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_NRBF2_5end |
Coexpression cluster: | C26_Eosinophils_Neutrophils_CD14_CD14CD16_Basophils_Monocytederived_Whole |
Association with transcript: | 0bp_to_ENST00000277746, ENST00000395241, ENST00000435510_5end |
EntrezGene: | NRBF2 |
HGNC: | 19692 |
UniProt: | Q96F24C9JGX3B4DWS0 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
macrophage dendritic cell progenitor | 2.82e-23 | 61 |
monopoietic cell | 1.27e-22 | 59 |
monocyte | 1.27e-22 | 59 |
monoblast | 1.27e-22 | 59 |
promonocyte | 1.27e-22 | 59 |
defensive cell | 1.85e-22 | 48 |
phagocyte | 1.85e-22 | 48 |
myeloid leukocyte | 1.91e-22 | 72 |
classical monocyte | 7.76e-20 | 42 |
CD14-positive, CD16-negative classical monocyte | 7.76e-20 | 42 |
granulocyte monocyte progenitor cell | 1.23e-19 | 67 |
myeloid lineage restricted progenitor cell | 2.71e-18 | 66 |
leukocyte | 3.54e-17 | 136 |
multi fate stem cell | 6.69e-17 | 427 |
nongranular leukocyte | 1.25e-16 | 115 |
somatic stem cell | 1.69e-16 | 433 |
mesenchymal cell | 2.15e-16 | 354 |
stem cell | 4.54e-16 | 441 |
connective tissue cell | 6.75e-16 | 361 |
hematopoietic lineage restricted progenitor cell | 1.77e-15 | 120 |
myeloid cell | 8.75e-15 | 108 |
common myeloid progenitor | 8.75e-15 | 108 |
hematopoietic oligopotent progenitor cell | 7.85e-14 | 161 |
hematopoietic multipotent progenitor cell | 7.85e-14 | 161 |
hematopoietic stem cell | 2.79e-12 | 168 |
motile cell | 3.55e-12 | 386 |
hematopoietic cell | 1.09e-10 | 177 |
Ontology term | p-value | n |
---|---|---|
hematopoietic system | 1.41e-18 | 98 |
blood island | 1.41e-18 | 98 |
hemolymphoid system | 1.78e-15 | 108 |
bone marrow | 2.62e-15 | 76 |
connective tissue | 6.63e-15 | 371 |
skeletal element | 3.96e-13 | 90 |
musculoskeletal system | 4.02e-12 | 167 |
bone element | 4.72e-12 | 82 |
skeletal system | 6.18e-12 | 100 |
immune system | 6.74e-12 | 93 |
mesoderm | 2.78e-11 | 315 |
mesoderm-derived structure | 2.78e-11 | 315 |
presumptive mesoderm | 2.78e-11 | 315 |
lateral plate mesoderm | 1.79e-08 | 203 |