FFCP PHASE1:Hg19::chr17:17494903..17494943,-: Difference between revisions
From FANTOM5_SSTAR
m (moved FFCP PHASE1 hg19::chr17:17494903..17494943,- to FFCP PHASE1:Hg19::chr17:17494903..17494943,-: NSchange) |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=10400 | |EntrezGene=10400 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=8830 | |HGNC=8830 | ||
|TSSclassifier=strong | |||
|UniProt=C9JBG1 | |UniProt=C9JBG1 | ||
|association_with_transcript=20bp_to_ENST00000421096_5end | |||
|cluster_id=chr17:17494903..17494943,- | |||
|coexpression_cluster_id=C3610 | |||
|description=CAGE_peak_2_at_PEMT_5end | |||
|id=chr17:17494903..17494943,- | |||
|ontology_enrichment_celltype=CL:0000055!2.55e-10!180;CL:0000325!1.10e-07!39 | |||
|ontology_enrichment_celltype_v019= | |||
|ontology_enrichment_celltype_v019_2=CL:0000057,5.30e-07,76 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000475!5.76e-20!365;UBERON:0000119!2.00e-12!312;UBERON:0000483!4.02e-12!309;UBERON:0000481!1.50e-11!347;UBERON:0000924!2.96e-11!173;UBERON:0006601!2.96e-11!173;UBERON:0000468!3.08e-11!659;UBERON:0004121!4.44e-11!169;UBERON:0000064!3.94e-10!219;UBERON:0000033!3.49e-09!123;UBERON:0000477!3.50e-09!286;UBERON:0005743!6.09e-09!86;UBERON:0000153!1.86e-08!129;UBERON:0007811!1.86e-08!129;UBERON:0001017!2.25e-08!82;UBERON:0000073!3.36e-08!94;UBERON:0001016!3.36e-08!94;UBERON:0004111!3.41e-08!241;UBERON:0000025!2.32e-07!194;UBERON:0000480!3.17e-07!626;UBERON:0000467!3.55e-07!625;UBERON:0002199!3.94e-07!45;UBERON:0002416!3.94e-07!45;UBERON:0001048!4.20e-07!168;UBERON:0002346!4.66e-07!90;UBERON:0003075!6.26e-07!86;UBERON:0007284!6.26e-07!86;UBERON:0000955!7.48e-07!69;UBERON:0006238!7.48e-07!69 | |||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000119,3.24e-11,309;UBERON:0000483,6.32e-11,306;UBERON:0004121,1.12e-10,171;UBERON:0000924,1.12e-10,171;UBERON:0006601,1.12e-10,171;UBERON:0010314,8.48e-09,132;UBERON:0001017,3.21e-08,81;UBERON:0004111,5.14e-08,240;UBERON:0001016,2.01e-07,89;UBERON:0000025,3.90e-07,192;UBERON:0002346,5.95e-07,86;UBERON:0003075,7.97e-07,82;UBERON:0007284,7.97e-07,82 | |||
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| ||
|short_description=p2@PEMT | |||
}} | }} |
Latest revision as of 21:45, 18 September 2015
Short description: | p2@PEMT |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_2_at_PEMT_5end |
Coexpression cluster: | C3610_osteosarcoma_Mesenchymal_Renal_thyroid_Adipocyte_Fibroblast_Melanocyte |
Association with transcript: | 20bp_to_ENST00000421096_5end |
EntrezGene: | PEMT |
HGNC: | 8830 |
UniProt: | C9JBG1 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
fibroblast | 5.30e-07 | 76 |
Ontology term | p-value | n |
---|---|---|
cell layer | 3.24e-11 | 309 |
epithelium | 6.32e-11 | 306 |
ectoderm-derived structure | 1.12e-10 | 171 |
ectoderm | 1.12e-10 | 171 |
presumptive ectoderm | 1.12e-10 | 171 |
structure with developmental contribution from neural crest | 8.48e-09 | 132 |
central nervous system | 3.21e-08 | 81 |
anatomical conduit | 5.14e-08 | 240 |
nervous system | 2.01e-07 | 89 |
tube | 3.90e-07 | 192 |
neurectoderm | 5.95e-07 | 86 |
neural plate | 7.97e-07 | 82 |
presumptive neural plate | 7.97e-07 | 82 |