FFCP PHASE1:Hg19::chr19:47354082..47354132,-: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=1175 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=565 | |||
|TSSclassifier=strong | |||
|UniProt=P53680 | |||
|association_with_transcript=70bp_to_ENST00000263270,ENST00000352203,NM_004069,NM_021575,uc002pft.1,uc002pfu.1_5end | |||
|cluster_id=chr19:47354082..47354132,- | |||
|coexpression_cluster_id=C1636 | |||
|description=CAGE_peak_1_at_AP2S1_5end | |||
|id=chr19:47354082..47354132,- | |||
|ontology_enrichment_celltype=CL:0000144!1.49e-28!625;CL:0000548!2.85e-28!679;CL:0000004!2.85e-28!679;CL:0000255!2.85e-28!679;CL:0002371!4.52e-28!591;CL:0000012!1.13e-27!682;CL:0000222!4.67e-27!119;CL:0000055!7.98e-20!180;CL:0000183!1.31e-18!59;CL:0000220!5.64e-18!246;CL:0002321!2.59e-17!248;CL:0000003!8.34e-17!722;CL:0000680!9.59e-17!57;CL:0000056!9.59e-17!57;CL:0000355!9.59e-17!57;CL:0000187!2.48e-16!54;CL:0000393!1.72e-15!60;CL:0000211!1.72e-15!60;CL:0000192!5.44e-15!42;CL:0000514!5.44e-15!42;CL:0000359!2.84e-12!32;CL:0000723!8.58e-12!436;CL:0000048!1.78e-11!430;CL:0000063!3.60e-11!578;CL:0000034!1.38e-10!444;CL:0000213!3.47e-10!57;CL:0000215!3.47e-10!57;CL:0000115!3.49e-10!35;CL:0002078!4.07e-10!44;CL:0000057!2.92e-08!75;CL:0000071!4.73e-07!18;CL:0002546!4.73e-07!18 | |||
|ontology_enrichment_celltype_v019=CL:0000359;1.31e-11;32!CL:0000192;7.80e-11;43!CL:0000187;1.67e-09;55!CL:0000115;4.41e-09;36!CL:0000393;5.59e-08;61!CL:0000211;5.59e-08;61!CL:0002078;1.65e-07;45!CL:0000071;4.80e-07;18 | |||
|ontology_enrichment_celltype_v019_2=CL:0000222,1.21e-27,121;CL:0002321,8.41e-18,250;CL:0000680,8.08e-17,58;CL:0000056,8.08e-17,58;CL:0000355,8.08e-17,58;CL:0000187,2.11e-16,55;CL:0000393,1.42e-15,61;CL:0000211,1.42e-15,61;CL:0000192,4.88e-15,43;CL:0000514,4.88e-15,43;CL:0000359,2.84e-12,32;CL:0000723,5.15e-12,433;CL:0000048,1.08e-11,427;CL:0000034,8.60e-11,441;CL:0000115,1.29e-10,36;CL:0000213,1.42e-10,58;CL:0000215,1.42e-10,58;CL:0002078,1.58e-10,45;CL:0000057,2.55e-08,76;CL:0000071,4.73e-07,18;CL:0002546,4.73e-07,18 | |||
|ontology_enrichment_development_v019=CL:0000514;7.80e-11;43!CL:0000355;5.10e-09;58!CL:0000222;1.27e-07;121!CL:0002546;4.80e-07;18 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000914!2.90e-19!83;UBERON:0002329!2.90e-19!83;UBERON:0003077!2.90e-19!83;UBERON:0003059!2.90e-19!83;UBERON:0007282!2.90e-19!83;UBERON:0009618!2.90e-19!83;UBERON:0007285!2.90e-19!83;UBERON:0004290!4.84e-18!70;UBERON:0000486!4.86e-17!82;UBERON:0005256!9.90e-15!143;UBERON:0002049!1.26e-14!79;UBERON:0007798!1.26e-14!79;UBERON:0001134!2.27e-14!61;UBERON:0002036!2.27e-14!61;UBERON:0003082!2.27e-14!61;UBERON:0001637!3.41e-13!42;UBERON:0003509!3.41e-13!42;UBERON:0004572!3.41e-13!42;UBERON:0004872!3.94e-13!84;UBERON:0003914!4.09e-13!118;UBERON:0001981!4.12e-13!60;UBERON:0007500!4.12e-13!60;UBERON:0004537!4.12e-13!60;UBERON:0006965!4.12e-13!60;UBERON:0002385!5.30e-13!63;UBERON:0001015!5.30e-13!63;UBERON:0000383!5.30e-13!63;UBERON:0000055!1.70e-12!69;UBERON:0000490!1.69e-11!138;UBERON:0002100!2.49e-11!216;UBERON:0000926!6.49e-11!448;UBERON:0004120!6.49e-11!448;UBERON:0006603!6.49e-11!448;UBERON:0002204!7.39e-10!167;UBERON:0004535!1.09e-09!110;UBERON:0003081!1.60e-09!216;UBERON:0004573!1.60e-09!33;UBERON:0004571!1.60e-09!33;UBERON:0001009!2.91e-09!113;UBERON:0000487!2.56e-07!22;UBERON:0003104!2.80e-07!238;UBERON:0009142!2.80e-07!238;UBERON:0006914!3.78e-07!25;UBERON:0001986!4.73e-07!18;UBERON:0004638!4.73e-07!18;UBERON:0004852!4.73e-07!18 | |||
|ontology_enrichment_uberon_v019=UBERON:0001637;2.74e-09;42!UBERON:0003509;2.74e-09;42!UBERON:0004572;2.74e-09;42!UBERON:0003914;2.92e-09;74!UBERON:0007500;4.76e-09;56!UBERON:0001981;4.76e-09;56!UBERON:0004537;4.76e-09;56!UBERON:0004573;1.22e-08;33!UBERON:0004571;1.22e-08;33!UBERON:0000487;2.57e-07;22!UBERON:0006914;3.78e-07;25!UBERON:0004638;4.80e-07;18!UBERON:0001986;4.80e-07;18!UBERON:0004852;4.80e-07;18!UBERON:0002049;7.61e-07;75!UBERON:0007798;7.61e-07;75!UBERON:0000055;9.81e-07;65 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0007503,2.11e-21,78;UBERON:0002329,3.94e-18,71;UBERON:0003059,3.94e-18,71;UBERON:0007282,3.94e-18,71;UBERON:0004290,3.94e-18,71;UBERON:0009618,3.94e-18,71;UBERON:0007524,4.94e-18,73;UBERON:0003077,5.44e-18,72;UBERON:0007285,5.44e-18,72;UBERON:0000486,3.82e-17,83;UBERON:0002049,1.39e-14,78;UBERON:0007798,1.39e-14,78;UBERON:0000490,1.68e-14,148;UBERON:0001134,1.83e-14,62;UBERON:0002036,1.83e-14,62;UBERON:0003082,1.83e-14,62;UBERON:0001637,3.41e-13,42;UBERON:0003509,3.41e-13,42;UBERON:0004572,3.41e-13,42;UBERON:0002385,4.22e-13,64;UBERON:0001015,4.22e-13,64;UBERON:0000383,4.22e-13,64;UBERON:0007500,4.37e-13,59;UBERON:0001981,4.37e-13,59;UBERON:0004537,4.37e-13,59;UBERON:0006965,4.37e-13,59;UBERON:0004872,4.44e-13,83;UBERON:0003914,5.38e-13,117;UBERON:0000926,5.73e-13,315;UBERON:0004120,5.73e-13,315;UBERON:0006603,5.73e-13,315;UBERON:0000055,1.87e-12,68;UBERON:0005256,1.24e-11,122;UBERON:0003104,3.98e-11,160;UBERON:0009142,3.98e-11,160;UBERON:0002204,7.20e-11,167;UBERON:0002100,2.17e-10,199;UBERON:0004535,1.27e-09,109;UBERON:0004573,1.60e-09,33;UBERON:0004571,1.60e-09,33;UBERON:0001009,3.40e-09,112;UBERON:0003081,1.47e-08,203;UBERON:0000487,2.56e-07,22;UBERON:0006914,3.78e-07,25;UBERON:0004638,4.73e-07,18;UBERON:0001986,4.73e-07,18;UBERON:0004852,4.73e-07,18 | |||
|phase1_expression=153.33655210435,158.862588727109,129.678051768293,240.175916047513,218.563975174944,242.510109699903,309.025851365339,137.083212533622,203.202418739474,157.515453297467,674.075928261365,176.282187309049,209.958514669849,145.672997433975,264.786503206605,194.301967324563,220.586197256776,238.081089466284,235.183609017024,146.02157487907,281.112952534581,166.444457104865,68.4104009243226,99.0970837527682,91.646126904206,52.8016633718343,51.3128684062161,52.6575126988514,94.0140621668881,48.3625041602488,77.408061658038,397.189968974897,390.965282574169,340.913197373778,36.1771826710009,37.6748466091667,90.7225357544678,67.587439840889,62.5698676106842,68.1414134047775,216.078432641527,160.327364679395,155.318067283414,84.0401820145884,73.6858090193178,89.2709345171164,87.3933178765374,61.264015315252,56.676265873804,101.555414489719,87.3508009264233,81.1134048517847,87.9101485878377,72.9397692449724,81.2558919566051,83.3913564173739,77.5053466164282,70.5631741157566,71.3175469224203,63.5439473610665,58.1796784477128,97.635984855268,82.9768815705988,81.8351521022773,69.3600080322316,57.8732929184963,53.5627134136194,80.1483242169011,80.8298523551312,79.0567394726625,79.9127343476047,60.7658099379482,61.7101655509725,165.41288918225,155.838951874377,172.339406607885,116.260133236622,132.60619637905,63.8080579187408,193.808665744049,133.473090400589,116.357065948072,68.6385353399158,50.2447522361161,56.9285922472675,39.2591804761187,41.6411826517453,49.4287098360856,54.2056795683587,55.3351177630511,27.3222225172535,25.2511991429504,22.1718472312633,74.0159440042545,42.5986507865967,72.9573914826963,14.7532327585375,26.7247318669432,22.8217663889455,57.6793409097839,30.6366930635575,38.8227200702481,37.0170783975031,62.7240872263527,40.9502211390024,51.1743296488165,33.8504829706269,73.3963262028119,74.5240061518102,84.5210829662895,124.081157985846,73.6099837767033,32.1781842061671,31.5698177145861,30.3153019034433,58.8075488600368,36.4059468921825,47.7642149220856,21.0006344376187,46.191985076994,48.180175585375,59.8784788002476,34.9334276260433,30.0768536212883,69.9612068693137,38.1211375790867,57.4789597844733,21.5719215250464,29.6858617319693,20.2754165435919,124.34150182012,246.817916370938,104.080125340634,123.250750963137,184.993689024643,139.342351240312,109.749460693052,136.744398555041,90.6588896603411,146.563131722755,105.577412403138,48.5277474719025,222.584421146743,272.155781003771,274.242547638207,237.6870914135,291.975681299428,77.5094528992361,117.258956709926,84.6923103031408,190.01686144257,269.253428268217,207.937160462949,272.478428007373,203.876725998014,221.470023761754,211.293911168716,103.625120426901,78.624344053763,59.2455484593466,164.757190697641,219.71863855265,134.478193709041,127.211425799671,230.890455146301,90.9964231214773,171.315911313768,148.196708316052,317.365439554378,203.14285114758,195.842664261605,19.7670626154095,23.2668158488995,191.881382942715,145.115809895033,142.712586645981,36.0152971811955,55.3594678045211,162.083450664649,182.22022004625,258.332569665886,220.520788284941,69.0888498587481,131.612326612085,153.654188926651,111.09635189138,198.20451802112,147.388180623458,211.644532090957,255.571376051913,179.338416662161,166.287250079571,155.559899537774,170.928631756636,114.530490073995,166.809002909381,104.772342112226,127.11630572918,188.664667039539,227.540340484507,439.075684649722,119.013632565525,113.607616043743,60.1229130600677,187.443444116118,237.834529540039,164.811150620537,137.366373806785,53.4581114352809,86.9178572491569,92.6142408067285,66.9203144268217,90.9953833175416,74.9733971532781,158.757678450846,38.3122274187674,126.278358688913,67.1473839489345,93.9829465137876,75.0037703639287,91.9474844618031,145.18377354603,161.760805064205,131.224119297879,96.0066344479738,106.117700293931,46.3500083292463,61.2287529645262,61.5827897208447,57.1172413134691,87.0506935520918,101.828683182157,405.204288734223,304.252963765235,502.811113723029,141.632218049754,282.976756814478,154.035453651877,134.699167372403,125.807757599178,153.198328125295,141.621638660064,139.515124037325,190.112144505832,163.060037519163,160.054817289698,244.329455480759,298.71497820134,155.574976283269,273.436203177108,116.614632036084,87.4716222843087,83.301376842078,72.8414114034173,44.8907800682364,98.4799231113537,121.274065376531,277.63233054632,108.068645342503,80.3667703976037,129.345897208199,360.857370492014,184.74411779235,45.7925099651553,79.3682773034154,97.5917186864859,154.637161200588,97.9808884008181,228.36907101023,206.036678902769,228.735598655192,229.324179836453,272.589551637528,210.901126470248,96.0857773297477,105.197122153851,72.9901960028214,97.0717354636633,303.255699219682,14.7798971368783,50.0115105195124,37.5263889128797,48.712544254933,41.9124878975581,76.7689541992324,157.761219755569,281.321873304113,295.95533161928,93.0588808965078,161.884908177872,84.3187976260206,124.46550362335,142.122982439649,121.374863033672,99.927036280762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| |||
|short_description=p1@AP2S1 | |||
}} |
Latest revision as of 22:06, 18 September 2015
Short description: | p1@AP2S1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_AP2S1_5end |
Coexpression cluster: | C1636_Mesenchymal_Alveolar_Placental_Smooth_Fibroblast_Bronchial_Hair |
Association with transcript: | 70bp_to_ENST00000263270, ENST00000352203, NM_004069, NM_021575, uc002pft.1, uc002pfu.1_5end |
EntrezGene: | AP2S1 |
HGNC: | 565 |
UniProt: | P53680 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
mesodermal cell | 1.21e-27 | 121 |
embryonic cell | 8.41e-18 | 250 |
muscle precursor cell | 8.08e-17 | 58 |
myoblast | 8.08e-17 | 58 |
multi-potent skeletal muscle stem cell | 8.08e-17 | 58 |
muscle cell | 2.11e-16 | 55 |
electrically responsive cell | 1.42e-15 | 61 |
electrically active cell | 1.42e-15 | 61 |
smooth muscle cell | 4.88e-15 | 43 |
smooth muscle myoblast | 4.88e-15 | 43 |
vascular associated smooth muscle cell | 2.84e-12 | 32 |
somatic stem cell | 5.15e-12 | 433 |
multi fate stem cell | 1.08e-11 | 427 |
stem cell | 8.60e-11 | 441 |
endothelial cell | 1.29e-10 | 36 |
lining cell | 1.42e-10 | 58 |
barrier cell | 1.42e-10 | 58 |
meso-epithelial cell | 1.58e-10 | 45 |
fibroblast | 2.55e-08 | 76 |
blood vessel endothelial cell | 4.73e-07 | 18 |
embryonic blood vessel endothelial progenitor cell | 4.73e-07 | 18 |