FFCP PHASE1:Hg19::chrX:108780419..108780470,+: Difference between revisions
From FANTOM5_SSTAR
(Created page with "{{FFCP
|id=chrX:108780419..108780470,+
|short_description=p1@NXT2
|description=CAGE_peak_1_at_NXT2_5end
|association_with_transcript=72bp_to_ENST00000372103,NM_001242618,u...") |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=55916 | |EntrezGene=55916 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=18151 | |HGNC=18151 | ||
|TSSclassifier=strong | |||
|UniProt=Q9NPJ8 | |UniProt=Q9NPJ8 | ||
|association_with_transcript=72bp_to_ENST00000372103,NM_001242618,uc004eog.1_5end | |||
|cluster_id=chrX:108780419..108780470,+ | |||
|description=CAGE_peak_1_at_NXT2_5end | |||
|id=chrX:108780419..108780470,+ | |||
|ontology_enrichment_celltype=CL:0000037!5.51e-36!172;CL:0000566!5.51e-36!172;CL:0002032!5.78e-34!165;CL:0000837!5.78e-34!165;CL:0000988!2.87e-31!182;CL:0000738!5.22e-31!140;CL:0002031!1.47e-29!124;CL:0002087!1.09e-27!119;CL:0000763!1.50e-24!112;CL:0000049!1.50e-24!112;CL:0000839!1.32e-20!70;CL:0002009!2.43e-20!65;CL:0000557!1.34e-19!71;CL:0002194!2.67e-19!63;CL:0000576!2.67e-19!63;CL:0000040!2.67e-19!63;CL:0000559!2.67e-19!63;CL:0000766!1.84e-18!76;CL:0002057!1.98e-15!42;CL:0000134!1.06e-14!358;CL:0000860!1.99e-14!45;CL:0002320!2.78e-14!365;CL:0000219!1.05e-11!390;CL:0000542!1.02e-08!53;CL:0000051!1.02e-08!53;CL:0000838!1.56e-08!52;CL:0000034!8.20e-08!444;CL:0000945!3.25e-07!24;CL:0000826!3.25e-07!24;CL:0000048!6.04e-07!430 | |||
|ontology_enrichment_celltype_v019=CL:0000576;3.41e-12;48!CL:0000473;4.39e-11;39!CL:0000234;4.39e-11;39!CL:0000860;1.30e-10;33!CL:0002057;1.30e-10;33!CL:0002087;1.90e-09;104!CL:0000766;5.31e-09;69!CL:0000738;3.35e-08;136!CL:0000763;5.16e-08;100!CL:0000945;2.55e-07;24 | |||
|ontology_enrichment_celltype_v019_2=CL:0000037,2.27e-37,168;CL:0002032,2.47e-35,161;CL:0000837,2.47e-35,161;CL:0000988,3.00e-33,177;CL:0000738,2.59e-32,136;CL:0002031,8.44e-31,120;CL:0002087,6.64e-29,115;CL:0000763,5.39e-26,108;CL:0000049,5.39e-26,108;CL:0000839,4.08e-22,66;CL:0002009,6.13e-22,61;CL:0000557,4.23e-21,67;CL:0002194,7.27e-21,59;CL:0000576,7.27e-21,59;CL:0000040,7.27e-21,59;CL:0000559,7.27e-21,59;CL:0000766,7.09e-20,72;CL:0000473,1.45e-17,48;CL:0000234,1.45e-17,48;CL:0000134,1.22e-15,354;CL:0000860,1.81e-15,42;CL:0002057,1.81e-15,42;CL:0002320,3.65e-15,361;CL:0000219,2.19e-12,386;CL:0000542,9.73e-09,53;CL:0000051,9.73e-09,53;CL:0000838,1.49e-08,52;CL:0000034,3.94e-08,441;CL:0000048,3.12e-07,427;CL:0000945,3.14e-07,24;CL:0000826,3.14e-07,24 | |||
|ontology_enrichment_development_v019=CL:0002057;4.07e-11;42!CL:0000049;2.06e-07;108 | |||
|ontology_enrichment_disease=DOID:2531!3.09e-08!51;DOID:0060083!3.09e-08!51;DOID:1240!3.57e-07!39 | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2=DOID:2531,2.70e-08,51;DOID:0060083,2.70e-08,51;DOID:1240,3.02e-07,39 | |||
|ontology_enrichment_uberon=UBERON:0002390!2.72e-21!102;UBERON:0003061!2.72e-21!102;UBERON:0002371!3.45e-18!80;UBERON:0002193!1.76e-16!112;UBERON:0001474!6.75e-16!86;UBERON:0004765!1.24e-15!101;UBERON:0001434!1.24e-15!101;UBERON:0002384!1.17e-13!375;UBERON:0002405!1.96e-11!115 | |||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002390,1.32e-22,98;UBERON:0003061,1.32e-22,98;UBERON:0002371,1.35e-19,76;UBERON:0002193,1.40e-17,108;UBERON:0001474,4.95e-17,82;UBERON:0004765,8.95e-17,90;UBERON:0001434,2.71e-16,100;UBERON:0002384,1.56e-14,371;UBERON:0002405,2.18e-14,93 | |||
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| ||
|short_description=p1@NXT2 | |||
}} | }} |
Latest revision as of 00:22, 19 September 2015
Short description: | p1@NXT2 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_NXT2_5end |
Coexpression cluster: | NA |
Association with transcript: | 72bp_to_ENST00000372103, NM_001242618, uc004eog.1_5end |
EntrezGene: | NXT2 |
HGNC: | 18151 |
UniProt: | Q9NPJ8 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
hematopoietic system | 1.32e-22 | 98 |
blood island | 1.32e-22 | 98 |
bone marrow | 1.35e-19 | 76 |
hemolymphoid system | 1.40e-17 | 108 |
bone element | 4.95e-17 | 82 |
skeletal element | 8.95e-17 | 90 |
skeletal system | 2.71e-16 | 100 |
connective tissue | 1.56e-14 | 371 |
immune system | 2.18e-14 | 93 |
Ontology term | p-value | n |
---|---|---|
hematologic cancer | 2.70e-08 | 51 |
immune system cancer | 2.70e-08 | 51 |
leukemia | 3.02e-07 | 39 |