FFCP PHASE1:Hg19::chr22:17565841..17565896,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=23765 | |EntrezGene=23765 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=5985 | |HGNC=5985 | ||
|TSSclassifier=strong | |||
|UniProt=Q96F46,D3YTB4 | |UniProt=Q96F46,D3YTB4 | ||
|association_with_transcript=0bp_to_ENST00000319363,ENST00000425985,ENST00000477874,NM_014339,uc002zly.2,uc010gqt.2_5end | |association_with_transcript=0bp_to_ENST00000319363,ENST00000425985,ENST00000477874,NM_014339,uc002zly.2,uc010gqt.2_5end | ||
|cluster_id=chr22:17565841..17565896,+ | |||
|coexpression_cluster_id=C246 | |||
|description=CAGE_peak_1_at_IL17RA_5end | |description=CAGE_peak_1_at_IL17RA_5end | ||
|id=chr22:17565841..17565896,+ | |id=chr22:17565841..17565896,+ | ||
|ontology_enrichment_celltype=CL:0000766!5.88e-31!76;CL:0002194!3.16e-26!63;CL:0000576!3.16e-26!63;CL:0000040!3.16e-26!63;CL:0000559!3.16e-26!63;CL:0000557!8.04e-25!71;CL:0002057!1.14e-24!42;CL:0002009!3.62e-24!65;CL:0000839!7.80e-24!70;CL:0000860!1.96e-20!45;CL:0000763!3.13e-17!112;CL:0000049!3.13e-17!112;CL:0000738!1.23e-13!140;CL:0002087!5.27e-12!119;CL:0002031!5.40e-10!124;CL:0000037!7.24e-10!172;CL:0000566!7.24e-10!172;CL:0002032!4.16e-09!165;CL:0000837!4.16e-09!165;CL:0000988!4.82e-09!182;CL:0002371!1.26e-08!591;CL:0002320!9.51e-08!365;CL:0000134!1.87e-07!358;CL:0000048!2.14e-07!430;CL:0000723!4.90e-07!436 | |ontology_enrichment_celltype=CL:0000766!5.88e-31!76;CL:0002194!3.16e-26!63;CL:0000576!3.16e-26!63;CL:0000040!3.16e-26!63;CL:0000559!3.16e-26!63;CL:0000557!8.04e-25!71;CL:0002057!1.14e-24!42;CL:0002009!3.62e-24!65;CL:0000839!7.80e-24!70;CL:0000860!1.96e-20!45;CL:0000763!3.13e-17!112;CL:0000049!3.13e-17!112;CL:0000738!1.23e-13!140;CL:0002087!5.27e-12!119;CL:0002031!5.40e-10!124;CL:0000037!7.24e-10!172;CL:0000566!7.24e-10!172;CL:0002032!4.16e-09!165;CL:0000837!4.16e-09!165;CL:0000988!4.82e-09!182;CL:0002371!1.26e-08!591;CL:0002320!9.51e-08!365;CL:0000134!1.87e-07!358;CL:0000048!2.14e-07!430;CL:0000723!4.90e-07!436 | ||
|ontology_enrichment_celltype_v019=CL:0000473;6.47e-19;39!CL:0000234;6.47e-19;39!CL:0000860;8.91e-19;33!CL:0002057;8.91e-19;33!CL:0000576;9.56e-18;48!CL:0000766;1.59e-14;69!CL:0000763;4.95e-07;100 | |||
|ontology_enrichment_celltype_v019_2=CL:0000766,4.97e-35,72;CL:0002194,2.18e-30,59;CL:0000576,2.18e-30,59;CL:0000040,2.18e-30,59;CL:0000559,2.18e-30,59;CL:0000557,1.75e-28,67;CL:0000473,2.14e-28,48;CL:0000234,2.14e-28,48;CL:0002009,5.31e-28,61;CL:0000839,1.98e-27,66;CL:0000860,1.14e-24,42;CL:0002057,1.14e-24,42;CL:0000763,2.55e-19,108;CL:0000049,2.55e-19,108;CL:0000738,3.41e-15,136;CL:0002087,1.39e-13,115;CL:0002031,2.33e-11,120;CL:0000037,5.41e-11,168;CL:0002032,3.35e-10,161;CL:0000837,3.35e-10,161;CL:0000988,6.91e-10,177;CL:0002320,2.54e-08,361;CL:0000048,4.81e-08,427;CL:0000134,5.11e-08,354;CL:0000723,1.16e-07,433 | |||
|ontology_enrichment_development_v019=CL:0002057;5.18e-18;42 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0003081!1.23e-34!216;UBERON:0002390!1.48e-27!102;UBERON:0003061!1.48e-27!102;UBERON:0002193!2.66e-26!112;UBERON:0002371!3.44e-22!80;UBERON:0001474!2.60e-19!86;UBERON:0002405!4.13e-19!115;UBERON:0004765!9.69e-16!101;UBERON:0001434!9.69e-16!101;UBERON:0002204!8.41e-14!167;UBERON:0000926!3.22e-08!448;UBERON:0004120!3.22e-08!448;UBERON:0006603!3.22e-08!448;UBERON:0001009!8.11e-08!113;UBERON:0004535!8.39e-08!110;UBERON:0002384!1.40e-07!375;UBERON:0004872!4.88e-07!84 | |ontology_enrichment_uberon=UBERON:0003081!1.23e-34!216;UBERON:0002390!1.48e-27!102;UBERON:0003061!1.48e-27!102;UBERON:0002193!2.66e-26!112;UBERON:0002371!3.44e-22!80;UBERON:0001474!2.60e-19!86;UBERON:0002405!4.13e-19!115;UBERON:0004765!9.69e-16!101;UBERON:0001434!9.69e-16!101;UBERON:0002204!8.41e-14!167;UBERON:0000926!3.22e-08!448;UBERON:0004120!3.22e-08!448;UBERON:0006603!3.22e-08!448;UBERON:0001009!8.11e-08!113;UBERON:0004535!8.39e-08!110;UBERON:0002384!1.40e-07!375;UBERON:0004872!4.88e-07!84 | ||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2=UBERON:0003081,7.13e-35,203;UBERON:0002390,1.33e-30,98;UBERON:0003061,1.33e-30,98;UBERON:0002193,4.54e-29,108;UBERON:0002371,2.68e-25,76;UBERON:0002405,5.04e-25,93;UBERON:0001474,5.35e-22,82;UBERON:0004765,5.54e-21,90;UBERON:0000926,3.32e-20,315;UBERON:0004120,3.32e-20,315;UBERON:0006603,3.32e-20,315;UBERON:0001434,7.13e-18,100;UBERON:0002204,1.60e-15,167;UBERON:0002384,3.84e-08,371;UBERON:0001009,8.43e-08,112;UBERON:0004535,8.71e-08,109;UBERON:0004872,4.99e-07,83 | |||
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| ||
|short_description=p1@IL17RA | |short_description=p1@IL17RA | ||
}} | }} |
Latest revision as of 00:40, 19 September 2015
Short description: | p1@IL17RA |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_IL17RA_5end |
Coexpression cluster: | C246_Neutrophils_Eosinophils_Whole_CD14_CD14CD16_Basophils_migratory |
Association with transcript: | 0bp_to_ENST00000319363, ENST00000425985, ENST00000477874, NM_014339, uc002zly.2, uc010gqt.2_5end |
EntrezGene: | IL17RA |
HGNC: | 5985 |
UniProt: | Q96F46D3YTB4 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
myeloid leukocyte | 4.97e-35 | 72 |
monopoietic cell | 2.18e-30 | 59 |
monocyte | 2.18e-30 | 59 |
monoblast | 2.18e-30 | 59 |
promonocyte | 2.18e-30 | 59 |
granulocyte monocyte progenitor cell | 1.75e-28 | 67 |
defensive cell | 2.14e-28 | 48 |
phagocyte | 2.14e-28 | 48 |
macrophage dendritic cell progenitor | 5.31e-28 | 61 |
myeloid lineage restricted progenitor cell | 1.98e-27 | 66 |
classical monocyte | 1.14e-24 | 42 |
CD14-positive, CD16-negative classical monocyte | 1.14e-24 | 42 |
myeloid cell | 2.55e-19 | 108 |
common myeloid progenitor | 2.55e-19 | 108 |
leukocyte | 3.41e-15 | 136 |
nongranular leukocyte | 1.39e-13 | 115 |
hematopoietic lineage restricted progenitor cell | 2.33e-11 | 120 |
hematopoietic stem cell | 5.41e-11 | 168 |
hematopoietic oligopotent progenitor cell | 3.35e-10 | 161 |
hematopoietic multipotent progenitor cell | 3.35e-10 | 161 |
hematopoietic cell | 6.91e-10 | 177 |
connective tissue cell | 2.54e-08 | 361 |
multi fate stem cell | 4.81e-08 | 427 |
mesenchymal cell | 5.11e-08 | 354 |
somatic stem cell | 1.16e-07 | 433 |
Ontology term | p-value | n |
---|---|---|
lateral plate mesoderm | 7.13e-35 | 203 |
hematopoietic system | 1.33e-30 | 98 |
blood island | 1.33e-30 | 98 |
hemolymphoid system | 4.54e-29 | 108 |
bone marrow | 2.68e-25 | 76 |
immune system | 5.04e-25 | 93 |
bone element | 5.35e-22 | 82 |
skeletal element | 5.54e-21 | 90 |
mesoderm | 3.32e-20 | 315 |
mesoderm-derived structure | 3.32e-20 | 315 |
presumptive mesoderm | 3.32e-20 | 315 |
skeletal system | 7.13e-18 | 100 |
musculoskeletal system | 1.60e-15 | 167 |
connective tissue | 3.84e-08 | 371 |
circulatory system | 8.43e-08 | 112 |
cardiovascular system | 8.71e-08 | 109 |
splanchnic layer of lateral plate mesoderm | 4.99e-07 | 83 |