FFCP PHASE1:Hg19::chrX:109245878..109245916,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=84187 | |EntrezGene=84187 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=26217 | |HGNC=26217 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=0bp_to_ENST00000471255_5end | |association_with_transcript=0bp_to_ENST00000471255_5end | ||
|cluster_id=chrX:109245878..109245916,+ | |||
|coexpression_cluster_id=C560 | |||
|description=CAGE_peak_2_at_TMEM164_5end | |description=CAGE_peak_2_at_TMEM164_5end | ||
|id=chrX:109245878..109245916,+ | |id=chrX:109245878..109245916,+ | ||
|ontology_enrichment_celltype=CL:0000763!1.65e-40!112;CL:0000049!1.65e-40!112;CL:0000766!2.80e-33!76;CL:0000557!3.18e-29!71;CL:0000839!8.61e-28!70;CL:0000037!7.70e-27!172;CL:0000566!7.70e-27!172;CL:0002009!8.37e-26!65;CL:0002032!9.91e-26!165;CL:0000837!9.91e-26!165;CL:0000988!1.89e-25!182;CL:0002194!1.91e-25!63;CL:0000576!1.91e-25!63;CL:0000040!1.91e-25!63;CL:0000559!1.91e-25!63;CL:0002057!1.93e-20!42;CL:0000738!1.56e-19!140;CL:0000860!2.09e-19!45;CL:0002031!1.33e-14!124;CL:0002087!3.49e-13!119 | |ontology_enrichment_celltype=CL:0000763!1.65e-40!112;CL:0000049!1.65e-40!112;CL:0000766!2.80e-33!76;CL:0000557!3.18e-29!71;CL:0000839!8.61e-28!70;CL:0000037!7.70e-27!172;CL:0000566!7.70e-27!172;CL:0002009!8.37e-26!65;CL:0002032!9.91e-26!165;CL:0000837!9.91e-26!165;CL:0000988!1.89e-25!182;CL:0002194!1.91e-25!63;CL:0000576!1.91e-25!63;CL:0000040!1.91e-25!63;CL:0000559!1.91e-25!63;CL:0002057!1.93e-20!42;CL:0000738!1.56e-19!140;CL:0000860!2.09e-19!45;CL:0002031!1.33e-14!124;CL:0002087!3.49e-13!119 | ||
|ontology_enrichment_celltype_v019=CL:0000473;1.19e-16;39!CL:0000234;1.19e-16;39!CL:0000576;2.20e-16;48!CL:0000766;4.59e-16;69!CL:0000860;1.16e-15;33!CL:0002057;1.16e-15;33!CL:0000763;1.10e-13;100!CL:0000094;9.88e-07;8 | |||
|ontology_enrichment_celltype_v019_2=CL:0000763,1.37e-42,108;CL:0000049,1.37e-42,108;CL:0000766,3.78e-35,72;CL:0000557,6.55e-31,67;CL:0000839,2.15e-29,66;CL:0002009,2.33e-27,61;CL:0000037,3.05e-27,168;CL:0002194,5.12e-27,59;CL:0000576,5.12e-27,59;CL:0000040,5.12e-27,59;CL:0000559,5.12e-27,59;CL:0002032,4.87e-26,161;CL:0000837,4.87e-26,161;CL:0000988,8.39e-26,177;CL:0000473,9.98e-25,48;CL:0000234,9.98e-25,48;CL:0000860,5.83e-21,42;CL:0002057,5.83e-21,42;CL:0000738,1.42e-19,136;CL:0002031,1.80e-14,120;CL:0002087,5.05e-13,115 | |||
|ontology_enrichment_development_v019=CL:0002057;4.18e-16;42!CL:0000049;4.36e-13;108 | |||
|ontology_enrichment_disease=DOID:8692!1.37e-07!31 | |ontology_enrichment_disease=DOID:8692!1.37e-07!31 | ||
|ontology_enrichment_disease_v019=DOID:8692;3.71e-08;31 | |||
|ontology_enrichment_disease_v019_2=DOID:8692,5.58e-08,31 | |||
|ontology_enrichment_uberon=UBERON:0002390!2.75e-28!102;UBERON:0003061!2.75e-28!102;UBERON:0002193!1.95e-27!112;UBERON:0002371!2.37e-25!80;UBERON:0001474!1.08e-20!86;UBERON:0003081!4.87e-17!216;UBERON:0002405!4.95e-14!115;UBERON:0004765!1.87e-13!101;UBERON:0001434!1.87e-13!101 | |ontology_enrichment_uberon=UBERON:0002390!2.75e-28!102;UBERON:0003061!2.75e-28!102;UBERON:0002193!1.95e-27!112;UBERON:0002371!2.37e-25!80;UBERON:0001474!1.08e-20!86;UBERON:0003081!4.87e-17!216;UBERON:0002405!4.95e-14!115;UBERON:0004765!1.87e-13!101;UBERON:0001434!1.87e-13!101 | ||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002390,4.99e-30,98;UBERON:0003061,4.99e-30,98;UBERON:0002193,3.84e-29,108;UBERON:0002371,7.53e-27,76;UBERON:0002405,2.06e-24,93;UBERON:0001474,7.52e-22,82;UBERON:0003081,1.19e-18,203;UBERON:0004765,1.34e-18,90;UBERON:0001434,8.00e-14,100;UBERON:0000926,8.85e-07,315;UBERON:0004120,8.85e-07,315;UBERON:0006603,8.85e-07,315 | |||
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| ||
|short_description=p2@TMEM164 | |short_description=p2@TMEM164 | ||
}} | }} |
Latest revision as of 00:52, 19 September 2015
Short description: | p2@TMEM164 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_2_at_TMEM164_5end |
Coexpression cluster: | C560_Neutrophils_Eosinophils_CD14CD16_Whole_CD14_acute_Dendritic |
Association with transcript: | 0bp_to_ENST00000471255_5end |
EntrezGene: | TMEM164 |
HGNC: | 26217 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
myeloid cell | 1.37e-42 | 108 |
common myeloid progenitor | 1.37e-42 | 108 |
myeloid leukocyte | 3.78e-35 | 72 |
granulocyte monocyte progenitor cell | 6.55e-31 | 67 |
myeloid lineage restricted progenitor cell | 2.15e-29 | 66 |
macrophage dendritic cell progenitor | 2.33e-27 | 61 |
hematopoietic stem cell | 3.05e-27 | 168 |
monopoietic cell | 5.12e-27 | 59 |
monocyte | 5.12e-27 | 59 |
monoblast | 5.12e-27 | 59 |
promonocyte | 5.12e-27 | 59 |
hematopoietic oligopotent progenitor cell | 4.87e-26 | 161 |
hematopoietic multipotent progenitor cell | 4.87e-26 | 161 |
hematopoietic cell | 8.39e-26 | 177 |
defensive cell | 9.98e-25 | 48 |
phagocyte | 9.98e-25 | 48 |
classical monocyte | 5.83e-21 | 42 |
CD14-positive, CD16-negative classical monocyte | 5.83e-21 | 42 |
leukocyte | 1.42e-19 | 136 |
hematopoietic lineage restricted progenitor cell | 1.80e-14 | 120 |
nongranular leukocyte | 5.05e-13 | 115 |
Ontology term | p-value | n |
---|---|---|
hematopoietic system | 4.99e-30 | 98 |
blood island | 4.99e-30 | 98 |
hemolymphoid system | 3.84e-29 | 108 |
bone marrow | 7.53e-27 | 76 |
immune system | 2.06e-24 | 93 |
bone element | 7.52e-22 | 82 |
lateral plate mesoderm | 1.19e-18 | 203 |
skeletal element | 1.34e-18 | 90 |
skeletal system | 8.00e-14 | 100 |
mesoderm | 8.85e-07 | 315 |
mesoderm-derived structure | 8.85e-07 | 315 |
presumptive mesoderm | 8.85e-07 | 315 |
Ontology term | p-value | n |
---|---|---|
myeloid leukemia | 5.58e-08 | 31 |