FFCP PHASE1:Hg19::chr17:21188012..21188031,+: Difference between revisions
From FANTOM5_SSTAR
(Created page with "{{FFCP
|id=chr17:21188012..21188031,+
|short_description=p1@MAP2K3
|description=CAGE_peak_1_at_MAP2K3_5end
|association_with_transcript=0bp_to_ENST00000479129,ENST00000483...") |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=5606 | |EntrezGene=5606 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=6843 | |HGNC=6843 | ||
|TSSclassifier=strong | |||
|UniProt=E9PMA8,E9PRM0 | |UniProt=E9PMA8,E9PRM0 | ||
|association_with_transcript=0bp_to_ENST00000479129,ENST00000483928,ENST00000529517,ENST00000534743_5end | |||
|cluster_id=chr17:21188012..21188031,+ | |||
|coexpression_cluster_id=C1047 | |||
|description=CAGE_peak_1_at_MAP2K3_5end | |||
|id=chr17:21188012..21188031,+ | |||
|ontology_enrichment_celltype=CL:0002057!7.72e-25!42;CL:0000766!3.63e-24!76;CL:0000860!8.37e-23!45;CL:0000557!2.95e-21!71;CL:0000839!7.97e-21!70;CL:0002009!2.08e-19!65;CL:0002194!2.35e-18!63;CL:0000576!2.35e-18!63;CL:0000040!2.35e-18!63;CL:0000559!2.35e-18!63;CL:0000738!8.96e-12!140;CL:0000034!2.32e-11!444;CL:0000723!3.13e-11!436;CL:0000763!3.24e-11!112;CL:0000049!3.24e-11!112;CL:0000048!6.95e-11!430;CL:0002031!2.82e-10!124;CL:0002371!1.15e-09!591;CL:0002087!2.61e-08!119;CL:0000134!3.25e-08!358;CL:0000063!3.52e-08!578;CL:0000144!1.28e-07!625;CL:0002320!2.28e-07!365;CL:0000012!2.94e-07!682;CL:0000548!7.29e-07!679;CL:0000004!7.29e-07!679;CL:0000255!7.29e-07!679 | |||
|ontology_enrichment_celltype_v019=CL:0000860;5.19e-19;33!CL:0002057;5.19e-19;33!CL:0000473;1.92e-17;39!CL:0000234;1.92e-17;39!CL:0000766;4.57e-12;69!CL:0000576;1.50e-11;48 | |||
|ontology_enrichment_celltype_v019_2=CL:0000473,1.23e-26,48;CL:0000234,1.23e-26,48;CL:0000766,5.44e-25,72;CL:0000860,7.72e-25,42;CL:0002057,7.72e-25,42;CL:0000557,5.02e-22,67;CL:0000839,1.37e-21,66;CL:0002009,3.50e-20,61;CL:0002194,4.17e-19,59;CL:0000576,4.17e-19,59;CL:0000040,4.17e-19,59;CL:0000559,4.17e-19,59;CL:0000738,7.17e-12,136;CL:0000034,1.83e-11,441;CL:0000763,2.32e-11,108;CL:0000049,2.32e-11,108;CL:0000723,2.46e-11,433;CL:0000048,5.46e-11,427;CL:0002031,2.25e-10,120;CL:0000134,1.91e-08,354;CL:0002087,2.22e-08,115;CL:0002320,1.40e-07,361 | |||
|ontology_enrichment_development_v019=CL:0002057;3.88e-18;42 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002390!2.16e-23!102;UBERON:0003061!2.16e-23!102;UBERON:0002193!5.93e-23!112;UBERON:0003081!1.13e-22!216;UBERON:0002204!7.07e-21!167;UBERON:0002371!9.67e-21!80;UBERON:0001474!1.78e-18!86;UBERON:0004765!1.17e-17!101;UBERON:0001434!1.17e-17!101;UBERON:0002405!3.83e-17!115;UBERON:0000926!8.07e-15!448;UBERON:0004120!8.07e-15!448;UBERON:0006603!8.07e-15!448;UBERON:0002384!5.79e-07!375 | |||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002390,6.58e-24,98;UBERON:0003061,6.58e-24,98;UBERON:0002193,2.18e-23,108;UBERON:0003081,1.14e-22,203;UBERON:0002371,2.26e-21,76;UBERON:0002204,5.39e-20,167;UBERON:0002405,4.24e-19,93;UBERON:0001474,5.79e-19,82;UBERON:0001434,4.53e-17,100;UBERON:0004765,3.14e-16,90;UBERON:0000926,1.17e-15,315;UBERON:0004120,1.17e-15,315;UBERON:0006603,1.17e-15,315;UBERON:0002384,3.65e-07,371 | |||
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|short_description=p1@MAP2K3 | |||
}} | }} |
Latest revision as of 02:02, 19 September 2015
Short description: | p1@MAP2K3 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_MAP2K3_5end |
Coexpression cluster: | C1047_Whole_blood_CD14_Neutrophils_Eosinophils_Reticulocytes_Mast |
Association with transcript: | 0bp_to_ENST00000479129, ENST00000483928, ENST00000529517, ENST00000534743_5end |
EntrezGene: | MAP2K3 |
HGNC: | 6843 |
UniProt: | E9PMA8E9PRM0 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
defensive cell | 1.23e-26 | 48 |
phagocyte | 1.23e-26 | 48 |
myeloid leukocyte | 5.44e-25 | 72 |
classical monocyte | 7.72e-25 | 42 |
CD14-positive, CD16-negative classical monocyte | 7.72e-25 | 42 |
granulocyte monocyte progenitor cell | 5.02e-22 | 67 |
myeloid lineage restricted progenitor cell | 1.37e-21 | 66 |
macrophage dendritic cell progenitor | 3.50e-20 | 61 |
monopoietic cell | 4.17e-19 | 59 |
monocyte | 4.17e-19 | 59 |
monoblast | 4.17e-19 | 59 |
promonocyte | 4.17e-19 | 59 |
leukocyte | 7.17e-12 | 136 |
stem cell | 1.83e-11 | 441 |
myeloid cell | 2.32e-11 | 108 |
common myeloid progenitor | 2.32e-11 | 108 |
somatic stem cell | 2.46e-11 | 433 |
multi fate stem cell | 5.46e-11 | 427 |
hematopoietic lineage restricted progenitor cell | 2.25e-10 | 120 |
mesenchymal cell | 1.91e-08 | 354 |
nongranular leukocyte | 2.22e-08 | 115 |
connective tissue cell | 1.40e-07 | 361 |
Ontology term | p-value | n |
---|---|---|
hematopoietic system | 6.58e-24 | 98 |
blood island | 6.58e-24 | 98 |
hemolymphoid system | 2.18e-23 | 108 |
lateral plate mesoderm | 1.14e-22 | 203 |
bone marrow | 2.26e-21 | 76 |
musculoskeletal system | 5.39e-20 | 167 |
immune system | 4.24e-19 | 93 |
bone element | 5.79e-19 | 82 |
skeletal system | 4.53e-17 | 100 |
skeletal element | 3.14e-16 | 90 |
mesoderm | 1.17e-15 | 315 |
mesoderm-derived structure | 1.17e-15 | 315 |
presumptive mesoderm | 1.17e-15 | 315 |
connective tissue | 3.65e-07 | 371 |