FFCP PHASE1:Hg19::chr18:24129225..24129240,-: Difference between revisions
From FANTOM5_SSTAR
Jump to: navigation, search
No edit summary |
No edit summary |
||
(One intermediate revision by the same user not shown) | |||
Line 1: | Line 1: | ||
{{FFCP | {{FFCP | ||
|DHSsupport=supported | |DHSsupport=supported | ||
|DPIdataset=robust | |DPIdataset=robust | ||
|EntrezGene=284252 | |EntrezGene=284252 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | ||
|HGNC=18249 | |HGNC=18249 | ||
|TSSclassifier= | |TSSclassifier=strong | ||
|UniProt=Q719H9 | |UniProt=Q719H9 | ||
|association_with_transcript=158bp_to_ENST00000408011,NM_001136205,uc002kvw.2_5end | |association_with_transcript=158bp_to_ENST00000408011,NM_001136205,uc002kvw.2_5end | ||
|cluster_id=chr18:24129225..24129240,- | |||
|description=CAGE_peak_7_at_KCTD1_5end | |description=CAGE_peak_7_at_KCTD1_5end | ||
|id=chr18:24129225..24129240,- | |id=chr18:24129225..24129240,- |
Latest revision as of 02:05, 19 September 2015
Short description: | p7@KCTD1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_7_at_KCTD1_5end |
Coexpression cluster: | NA |
Association with transcript: | 158bp_to_ENST00000408011, NM_001136205, uc002kvw.2_5end |
EntrezGene: | KCTD1 |
HGNC: | 18249 |
UniProt: | Q719H9 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
Sample | p7@KCTD1 |
---|
0
1
2
3
4
5
6
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
amniotic epithelial cell | 3.10e-09 | 2 |
mammary gland epithelial cell | 3.29e-09 | 4 |
acinar cell | 2.99e-08 | 5 |
endo-epithelial cell | 9.93e-08 | 42 |
protein secreting cell | 6.20e-07 | 6 |
acinar cell of salivary gland | 7.48e-07 | 3 |
Showing 1 to 6 of 6 entries
Ontology term | p-value | n |
---|---|---|
cerebral hemisphere | 1.92e-27 | 32 |
telencephalon | 1.19e-25 | 34 |
neocortex | 1.91e-25 | 20 |
regional part of telencephalon | 4.67e-24 | 32 |
regional part of cerebral cortex | 5.33e-23 | 22 |
brain grey matter | 1.77e-22 | 34 |
gray matter | 1.77e-22 | 34 |
regional part of forebrain | 9.83e-21 | 41 |
forebrain | 9.83e-21 | 41 |
anterior neural tube | 9.83e-21 | 41 |
Showing 1 to 10 of 48 entries