FFCP PHASE1:Hg19::chr1:183604794..183604908,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=10092 | |EntrezGene=10092 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=708 | |HGNC=708 | ||
|TSSclassifier=strong | |||
|UniProt=O15511,B1ALC0 | |UniProt=O15511,B1ALC0 | ||
|association_with_transcript=0bp_to_ENST00000294742,ENST00000359856,ENST00000367534_5end | |association_with_transcript=0bp_to_ENST00000294742,ENST00000359856,ENST00000367534_5end | ||
|cluster_id=chr1:183604794..183604908,- | |||
|coexpression_cluster_id=C1246 | |||
|description=CAGE_peak_1_at_ARPC5_5end | |description=CAGE_peak_1_at_ARPC5_5end | ||
|id=chr1:183604794..183604908,- | |id=chr1:183604794..183604908,- | ||
|ontology_enrichment_celltype=CL:0000048!6.47e-41!430;CL:0000723!2.44e-39!436;CL:0000034!9.04e-36!444;CL:0000144!3.07e-31!625;CL:0002371!8.93e-31!591;CL:0000766!1.37e-29!76;CL:0002009!2.05e-28!65;CL:0000134!3.68e-28!358;CL:0002194!6.28e-28!63;CL:0000576!6.28e-28!63;CL:0000040!6.28e-28!63;CL:0000559!6.28e-28!63;CL:0002320!2.34e-26!365;CL:0000557!6.99e-26!71;CL:0000003!1.24e-25!722;CL:0000839!5.08e-24!70;CL:0000548!1.91e-23!679;CL:0000004!1.91e-23!679;CL:0000255!1.91e-23!679;CL:0000012!4.39e-23!682;CL:0000738!1.08e-22!140;CL:0000219!2.95e-21!390;CL:0002057!1.52e-20!42;CL:0000763!1.85e-20!112;CL:0000049!1.85e-20!112;CL:0000860!5.93e-19!45;CL:0002087!8.77e-18!119;CL:0002031!1.51e-16!124;CL:0000037!2.22e-16!172;CL:0000566!2.22e-16!172;CL:0002032!4.24e-16!165;CL:0000837!4.24e-16!165;CL:0000063!9.55e-15!578;CL:0000988!1.54e-14!182;CL:0000222!5.24e-13!119;CL:0000359!4.43e-10!32;CL:0000192!3.99e-09!42;CL:0000514!3.99e-09!42;CL:0000680!6.55e-09!57;CL:0000056!6.55e-09!57;CL:0000355!6.55e-09!57;CL:0000187!2.48e-08!54;CL:0000055!7.66e-08!180 | |ontology_enrichment_celltype=CL:0000048!6.47e-41!430;CL:0000723!2.44e-39!436;CL:0000034!9.04e-36!444;CL:0000144!3.07e-31!625;CL:0002371!8.93e-31!591;CL:0000766!1.37e-29!76;CL:0002009!2.05e-28!65;CL:0000134!3.68e-28!358;CL:0002194!6.28e-28!63;CL:0000576!6.28e-28!63;CL:0000040!6.28e-28!63;CL:0000559!6.28e-28!63;CL:0002320!2.34e-26!365;CL:0000557!6.99e-26!71;CL:0000003!1.24e-25!722;CL:0000839!5.08e-24!70;CL:0000548!1.91e-23!679;CL:0000004!1.91e-23!679;CL:0000255!1.91e-23!679;CL:0000012!4.39e-23!682;CL:0000738!1.08e-22!140;CL:0000219!2.95e-21!390;CL:0002057!1.52e-20!42;CL:0000763!1.85e-20!112;CL:0000049!1.85e-20!112;CL:0000860!5.93e-19!45;CL:0002087!8.77e-18!119;CL:0002031!1.51e-16!124;CL:0000037!2.22e-16!172;CL:0000566!2.22e-16!172;CL:0002032!4.24e-16!165;CL:0000837!4.24e-16!165;CL:0000063!9.55e-15!578;CL:0000988!1.54e-14!182;CL:0000222!5.24e-13!119;CL:0000359!4.43e-10!32;CL:0000192!3.99e-09!42;CL:0000514!3.99e-09!42;CL:0000680!6.55e-09!57;CL:0000056!6.55e-09!57;CL:0000355!6.55e-09!57;CL:0000187!2.48e-08!54;CL:0000055!7.66e-08!180 | ||
|ontology_enrichment_celltype_v019=CL:0000473;3.04e-17;39!CL:0000234;3.04e-17;39!CL:0000860;7.42e-17;33!CL:0002057;7.42e-17;33!CL:0000576;1.15e-15;48!CL:0000766;9.05e-13;69!CL:0000359;2.01e-09;32 | |||
|ontology_enrichment_celltype_v019_2=CL:0000048,2.74e-41,427;CL:0000723,1.07e-39,433;CL:0000034,4.20e-36,441;CL:0000766,1.77e-30,72;CL:0002009,1.78e-29,61;CL:0002194,5.15e-29,59;CL:0000576,5.15e-29,59;CL:0000040,5.15e-29,59;CL:0000559,5.15e-29,59;CL:0000134,2.03e-28,354;CL:0000557,1.05e-26,67;CL:0002320,1.36e-26,361;CL:0000839,8.87e-25,66;CL:0000473,2.52e-24,48;CL:0000234,2.52e-24,48;CL:0000738,7.15e-23,136;CL:0000219,1.95e-21,386;CL:0000763,1.03e-20,108;CL:0000049,1.03e-20,108;CL:0000860,1.52e-20,42;CL:0002057,1.52e-20,42;CL:0002087,5.94e-18,115;CL:0002031,1.12e-16,120;CL:0000037,2.12e-16,168;CL:0002032,3.96e-16,161;CL:0000837,3.96e-16,161;CL:0000988,1.58e-14,177;CL:0000222,4.88e-13,121;CL:0000359,4.43e-10,32;CL:0000192,3.97e-09,43;CL:0000514,3.97e-09,43;CL:0000680,6.15e-09,58;CL:0000056,6.15e-09,58;CL:0000355,6.15e-09,58;CL:0000187,2.32e-08,55 | |||
|ontology_enrichment_development_v019=CL:0002057;6.00e-15;42!CL:0000049;6.11e-07;108 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0003081!1.82e-29!216;UBERON:0002193!4.20e-28!112;UBERON:0002204!4.86e-28!167;UBERON:0002390!5.01e-28!102;UBERON:0003061!5.01e-28!102;UBERON:0002384!2.08e-25!375;UBERON:0002371!4.98e-25!80;UBERON:0001474!1.54e-22!86;UBERON:0004765!8.05e-22!101;UBERON:0001434!8.05e-22!101;UBERON:0002405!1.60e-17!115;UBERON:0004535!5.05e-15!110;UBERON:0001009!7.55e-14!113;UBERON:0000926!1.97e-11!448;UBERON:0004120!1.97e-11!448;UBERON:0006603!1.97e-11!448;UBERON:0004872!2.54e-11!84;UBERON:0002049!1.04e-10!79;UBERON:0007798!1.04e-10!79;UBERON:0000055!1.74e-10!69;UBERON:0001981!3.33e-10!60;UBERON:0007500!3.33e-10!60;UBERON:0004537!3.33e-10!60;UBERON:0006965!3.33e-10!60;UBERON:0001637!5.06e-10!42;UBERON:0003509!5.06e-10!42;UBERON:0004572!5.06e-10!42;UBERON:0004573!4.27e-08!33;UBERON:0004571!4.27e-08!33;UBERON:0000914!2.60e-07!83;UBERON:0002329!2.60e-07!83;UBERON:0003077!2.60e-07!83;UBERON:0003059!2.60e-07!83;UBERON:0007282!2.60e-07!83;UBERON:0009618!2.60e-07!83;UBERON:0007285!2.60e-07!83;UBERON:0004290!6.39e-07!70 | |||
|ontology_enrichment_uberon_v019=UBERON:0004573;2.11e-07;33!UBERON:0004571;2.11e-07;33!UBERON:0001637;3.21e-07;42!UBERON:0003509;3.21e-07;42!UBERON:0004572;3.21e-07;42!UBERON:0007500;7.42e-07;56!UBERON:0001981;7.42e-07;56!UBERON:0004537;7.42e-07;56 | |||
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105800735121 | ||
|short_description=p1@ARPC5 | |short_description=p1@ARPC5 | ||
}} | }} |
Latest revision as of 03:50, 19 September 2015
Short description: | p1@ARPC5 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_ARPC5_5end |
Coexpression cluster: | C1246_Neutrophils_Eosinophils_CD14_migratory_Macrophage_Dendritic_Mast |
Association with transcript: | 0bp_to_ENST00000294742, ENST00000359856, ENST00000367534_5end |
EntrezGene: | ARPC5 |
HGNC: | 708 |
UniProt: | O15511B1ALC0 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
lateral plate mesoderm | 1.13e-32 | 203 |
hematopoietic system | 1.54e-28 | 98 |
blood island | 1.54e-28 | 98 |
hemolymphoid system | 1.55e-28 | 108 |
musculoskeletal system | 1.94e-27 | 167 |
mesoderm | 8.95e-26 | 315 |
mesoderm-derived structure | 8.95e-26 | 315 |
presumptive mesoderm | 8.95e-26 | 315 |
bone marrow | 1.11e-25 | 76 |
connective tissue | 1.25e-25 | 371 |
immune system | 2.65e-25 | 93 |
bone element | 4.92e-23 | 82 |
skeletal element | 4.11e-22 | 90 |
skeletal system | 3.68e-21 | 100 |
cardiovascular system | 1.28e-14 | 109 |
circulatory system | 1.85e-13 | 112 |
splanchnic layer of lateral plate mesoderm | 6.18e-11 | 83 |
vasculature | 2.51e-10 | 78 |
vascular system | 2.51e-10 | 78 |
vessel | 4.31e-10 | 68 |
artery | 5.06e-10 | 42 |
arterial blood vessel | 5.06e-10 | 42 |
arterial system | 5.06e-10 | 42 |
epithelial tube open at both ends | 8.48e-10 | 59 |
blood vessel | 8.48e-10 | 59 |
blood vasculature | 8.48e-10 | 59 |
vascular cord | 8.48e-10 | 59 |
systemic artery | 4.27e-08 | 33 |
systemic arterial system | 4.27e-08 | 33 |
somite | 5.77e-07 | 71 |
presomitic mesoderm | 5.77e-07 | 71 |
presumptive segmental plate | 5.77e-07 | 71 |
dermomyotome | 5.77e-07 | 71 |
trunk paraxial mesoderm | 5.77e-07 | 71 |