FFCP PHASE1:Hg19::chr15:75913265..75913337,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=10073 | |EntrezGene=10073 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=novel_coding | |||
|HGNC=14245 | |HGNC=14245 | ||
|TSSclassifier=strong | |||
|UniProt=O95149 | |UniProt=O95149 | ||
|association_with_transcript=54bp_to_CR456811,CU678612,DQ893088,DQ896360_5end | |association_with_transcript=54bp_to_CR456811,CU678612,DQ893088,DQ896360_5end | ||
|cluster_id=chr15:75913265..75913337,- | |||
|coexpression_cluster_id=C2349 | |||
|description=CAGE_peak_4_at_SNUPN_5end | |description=CAGE_peak_4_at_SNUPN_5end | ||
|id=chr15:75913265..75913337,- | |id=chr15:75913265..75913337,- | ||
|ontology_enrichment_celltype=CL:0000055!2.58e-18!180;CL:0000680!5.51e-12!57;CL:0000056!5.51e-12!57;CL:0000355!5.51e-12!57;CL:0000187!1.14e-11!54;CL:0000359!1.29e-11!32;CL:0000192!1.14e-10!42;CL:0000514!1.14e-10!42;CL:0000183!2.15e-10!59;CL:0000393!5.76e-10!60;CL:0000211!5.76e-10!60;CL:0000048!1.01e-09!430;CL:0000723!1.81e-09!436;CL:0000034!3.85e-09!444;CL:0000057!1.86e-07!75;CL:0002494!3.83e-07!16;CL:0000144!4.82e-07!625 | |ontology_enrichment_celltype=CL:0000055!2.58e-18!180;CL:0000680!5.51e-12!57;CL:0000056!5.51e-12!57;CL:0000355!5.51e-12!57;CL:0000187!1.14e-11!54;CL:0000359!1.29e-11!32;CL:0000192!1.14e-10!42;CL:0000514!1.14e-10!42;CL:0000183!2.15e-10!59;CL:0000393!5.76e-10!60;CL:0000211!5.76e-10!60;CL:0000048!1.01e-09!430;CL:0000723!1.81e-09!436;CL:0000034!3.85e-09!444;CL:0000057!1.86e-07!75;CL:0002494!3.83e-07!16;CL:0000144!4.82e-07!625 | ||
|ontology_enrichment_celltype_v019=CL:0000359;2.35e-13;32!CL:0000860;2.57e-12;33!CL:0002057;2.57e-12;33!CL:0002494;4.53e-10;16!CL:0000192;6.50e-09;43!CL:0000473;1.90e-08;39!CL:0000234;1.90e-08;39 | |||
|ontology_enrichment_celltype_v019_2=CL:0000048,1.97e-18,427;CL:0000723,4.93e-18,433;CL:0000034,6.51e-17,441;CL:0000359,4.70e-14,32;CL:0000192,5.05e-12,43;CL:0000514,5.05e-12,43;CL:0000187,5.51e-11,55;CL:0000680,1.36e-10,58;CL:0000056,1.36e-10,58;CL:0000355,1.36e-10,58;CL:0002320,1.43e-10,361;CL:0002494,1.78e-10,16;CL:0000393,1.05e-09,61;CL:0000211,1.05e-09,61;CL:0000134,1.14e-09,354;CL:0000860,8.82e-09,42;CL:0002057,8.82e-09,42;CL:0000219,1.16e-08,386;CL:0000473,1.94e-07,48;CL:0000234,1.94e-07,48;CL:0000057,2.34e-07,76;CL:0000136,9.31e-07,15 | |||
|ontology_enrichment_development_v019=CL:0000514;6.50e-09;43!CL:0002057;4.57e-07;42 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019=DOID:2394;3.16e-09;14 | |||
|ontology_enrichment_disease_v019_2=DOID:2394,2.67e-09,14 | |||
|ontology_enrichment_uberon=UBERON:0002204!1.27e-13!167;UBERON:0001637!6.06e-13!42;UBERON:0003509!6.06e-13!42;UBERON:0004572!6.06e-13!42;UBERON:0004573!2.68e-11!33;UBERON:0004571!2.68e-11!33;UBERON:0001134!3.35e-11!61;UBERON:0002036!3.35e-11!61;UBERON:0003082!3.35e-11!61;UBERON:0002385!6.40e-11!63;UBERON:0001015!6.40e-11!63;UBERON:0000383!6.40e-11!63;UBERON:0000914!2.51e-10!83;UBERON:0002329!2.51e-10!83;UBERON:0003077!2.51e-10!83;UBERON:0003059!2.51e-10!83;UBERON:0007282!2.51e-10!83;UBERON:0009618!2.51e-10!83;UBERON:0007285!2.51e-10!83;UBERON:0004290!2.98e-10!70;UBERON:0004872!2.15e-09!84;UBERON:0000486!2.88e-09!82;UBERON:0001981!2.02e-07!60;UBERON:0007500!2.02e-07!60;UBERON:0004537!2.02e-07!60;UBERON:0006965!2.02e-07!60 | |||
|ontology_enrichment_uberon_v019=UBERON:0004573;1.04e-11;33!UBERON:0004571;1.04e-11;33!UBERON:0001637;6.47e-10;42!UBERON:0003509;6.47e-10;42!UBERON:0004572;6.47e-10;42!UBERON:0004457;9.46e-07;9!UBERON:0000042;9.46e-07;9 | |||
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|phase1_expression=3.63356758541113,2.5692062866918,2.96004248601539,2.00146596706261,2.23480547213644,1.74467704820074,2.53299878168311,1.89515962028049,0.783556884599516,0.245733936501509,0,0,0.263766978228454,3.21792517696121,3.64537113300707,0.672325146451775,1.20538905604795,1.46062018077475,1.95173119516203,0.123121058076788,0.204000691244253,0.313454721478088,0,0.136874425072884,0.125542639594803,0.229240217243854,0.164201178899891,0.0787107813136792,0,0,0,0,0.90361775633475,0.739508020333575,0,0,0,0,0,0,0,0.647787332037959,0.257575567634187,0,1.13362783106643,0.970336244751265,7.20530014407622,23.4365696172441,51.7209639394823,4.02769349251011,6.91633907628572,9.93225365532058,13.4450815487281,25.819387343353,21.6682378550947,6.58848188399116,7.91427835167753,17.5284317867166,7.95818120164347,10.269728866435,14.0654167675789,0,0.797854630486527,0.426224750532694,0.290209238628584,0.56738522469114,1.24564449799115,15.0749199154046,13.5585558789252,23.0220175387424,0.605399502633369,3.31449872388808,2.84816148696796,0,0,0.209658645508376,0,0,0.16072558669708,0,0.19891667719909,0,0,0,0,0,0,0,0,0,0,0,0,0,0.560508562981536,0,0,0,0,0,0.32592226663359,0,0,0.111410456885174,0,0.221533894583621,0,0.128091319725675,0,0,0.276350017785848,0.579606171470105,0.14828656316206,0.267540828089713,0,0.226618685395132,0,0,0.759059076058509,0,0,0,0.150575119077773,0.255973222308837,0,0,0,0.201606743224732,0,0.289648807765598,4.87613732627923,3.35350429851818,1.79007586580942,2.89151321907653,4.51204119572301,3.47631645505977,2.3858578411533,2.91980922181582,0.189069634328136,0.221729397462564,0.175669571386252,0.261958150995425,0,0.370784442784429,0.649094787309367,0.696518949197069,1.06366368415092,0,0,0.371457501329565,0.993812036833525,1.72046919021225,0,1.69592382577203,0.419499436209906,0.275118041940067,0.835979866147242,1.03366703667732,0,0,0,0,0,0.735326160691737,0,0.0892997282840798,0.22452937262617,0.225222960966644,0,0,1.28241220751285,0,0,0.872188104285069,2.48485975847659,3.79891534993739,1.58891016975863,2.86836620748814,1.41867352879343,2.24271040056923,2.1349799145941,1.2333377420858,0.311211035399766,1.48181739276657,0.163461903113459,0.454072282934794,0,0,2.49728061464256,0,1.34503812496621,0.352303495931295,0.809364721840658,0.140450806702248,1.22492502752936,0.245668634623536,1.03325781175765,0,0.989067717114227,0,2.15585442544872,0.168336113954066,0.125118519871964,1.38532057742091,0.438977620880838,0.30648779579902,1.05166641234618,3.06266894532057,0,1.49490172172997,2.11931901159562,1.20036438433761,1.64884046781502,0.257640540045629,0.744467425326359,1.5189869901714,2.92311015483596,0.504867548488229,2.20919756741518,1.13152239773168,1.06502877754984,1.30977727695932,0.508681776931463,0.57978255948989,2.18196896472668,0.860413786167011,0.243947412259191,0.397589304964456,0.348581828608555,0.207322110030741,0.252320850875628,0.72995471815166,0,0,1.38134921352481,0.928735856063958,4.33127689001751,0,0,0,0.110293972732394,0.435758888184812,0,0.134831308160164,0.784885860501384,0,0,0,0.4115740113314,0,0,0,0,0,0,0.857839051492628,1.09750285408626,0,0.301586917234893,0.462942225792648,0.325808305310325,2.07986957055916,0,0,0.469634776943287,0.144366447761074,0,0,0,0,0.246217006087397,0.702012795417713,0.445893486866185,0,1.51183915378974,1.41775097242386,1.16426079513703,2.03443756959773,0.383382679165211,61.090241499097,0.176096868026452,0.621984346622316,0.720599767084807,0.75745460055828,0.825472625798197,0.381988425558278,1.17217447210047,0,2.26220483947312,3.00343057843917,0.285826432630578,0.672786506072164,0,0.36669142910475,1.68053230485111,0,0,1.06375246633948,0,0.514414748524284,0,0,0.714889968290738,1.62786481617433,0,0.977208552881205,0.355391948742546,0,3.31583314765545,0,0.99972991182057,1.2162378064119,0.502257091432126,0,1.91699884393266,1.14861935834114,0,0.579125226670317,0.61642896765115,1.07436577943937,0.112085143993527,0.197030760201927,0,0,0.254094624222463,0,0.773288812777695,0,0,0,0,0,0.49076596687656,0,1.62759014219841,1.45579603071565,1.60586089917446,1.26161932027148,1.28855556491985,4.51419149591578,4.5481500811197,5.17365356462525,0.664225598535437,1.29058417979192,0.868836144680828,0.195801157462741,1.02943027143257,0,0,0.106727557803444,0,0,0,3.72161711728165,1.38115775959256,1.96462066103151,5.63812256725084,1.53512174720011,4.18220194973379,4.45254199334973,0.462629081407967,1.9531789784444,0.98552587216571,0.519254429183621,0.464841513839837,0,0.40101294060657,0.276242966807689,1.03333003348146,0.546273504020151,1.44236856455367,0.451199612907412,0.308061348417659,0,0,0.105551628892876,0,0.510281115829547,0.431831832204279,0,0,0,0,0,0,0,0,0,0,0.325378394664303,0.309123034943167,0.0915694648183434,0,1.72279661398852,0,6.42735719376638,1.45006077438183,0.616194468458578,0.921022048356777,0.137836572484531,0.859361958946189,0.435050081742686,0.426133137080504,0.890320356467374,0.661139661443912,0.768760269460425,0.255225424989168,0.2023155617111,7.43752878875657,4.407372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| ||
|short_description=p4@SNUPN | |short_description=p4@SNUPN | ||
}} | }} |
Latest revision as of 04:00, 19 September 2015
Short description: | p4@SNUPN |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_4_at_SNUPN_5end |
Coexpression cluster: | C2349_Mast_CD14_Smooth_Mesenchymal_Hair_mesothelioma_papillotubular |
Association with transcript: | 54bp_to_CR456811, CU678612, DQ893088, DQ896360_5end |
EntrezGene: | SNUPN |
HGNC: | 14245 |
UniProt: | O95149 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
multi fate stem cell | 1.97e-18 | 427 |
somatic stem cell | 4.93e-18 | 433 |
stem cell | 6.51e-17 | 441 |
vascular associated smooth muscle cell | 4.70e-14 | 32 |
smooth muscle cell | 5.05e-12 | 43 |
smooth muscle myoblast | 5.05e-12 | 43 |
muscle cell | 5.51e-11 | 55 |
muscle precursor cell | 1.36e-10 | 58 |
myoblast | 1.36e-10 | 58 |
multi-potent skeletal muscle stem cell | 1.36e-10 | 58 |
connective tissue cell | 1.43e-10 | 361 |
cardiocyte | 1.78e-10 | 16 |
electrically responsive cell | 1.05e-09 | 61 |
electrically active cell | 1.05e-09 | 61 |
mesenchymal cell | 1.14e-09 | 354 |
classical monocyte | 8.82e-09 | 42 |
CD14-positive, CD16-negative classical monocyte | 8.82e-09 | 42 |
motile cell | 1.16e-08 | 386 |
defensive cell | 1.94e-07 | 48 |
phagocyte | 1.94e-07 | 48 |
fibroblast | 2.34e-07 | 76 |
fat cell | 9.31e-07 | 15 |
Ontology term | p-value | n |
---|---|---|
ovarian cancer | 2.67e-09 | 14 |