FFCP PHASE1:Hg19::chr12:54379029..54379057,+: Difference between revisions
From FANTOM5_SSTAR
m (moved FFCP PHASE1 hg19::chr12:54379029..54379057,+ to FFCP PHASE1:Hg19::chr12:54379029..54379057,+: NSchange) |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=3226 | |EntrezGene=3226 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=5122 | |HGNC=5122 | ||
|TSSclassifier=strong | |||
|UniProt=Q9NYD6 | |UniProt=Q9NYD6 | ||
|association_with_transcript=59bp_to_ENST00000303460_5end | |||
|cluster_id=chr12:54379029..54379057,+ | |||
|coexpression_cluster_id=C321 | |||
|description=CAGE_peak_2_at_HOXC10_5end | |||
|id=chr12:54379029..54379057,+ | |||
|ontology_enrichment_celltype=CL:0000153!1.88e-09!9;CL:0000447!1.88e-09!9;CL:0000188!2.62e-08!9;CL:0000035!6.88e-08!20;CL:0002570!2.72e-07!8;CL:1000507!3.34e-07!12;CL:1000494!3.34e-07!12;CL:0000136!3.42e-07!15;CL:1000449!5.49e-07!16;CL:1000497!6.37e-07!18;CL:0002518!6.37e-07!18;CL:0000667!6.99e-07!6;CL:0000058!6.99e-07!6;CL:0000138!6.99e-07!6 | |||
|ontology_enrichment_celltype_v019=CL:0000153;2.51e-14;9!CL:0000447;2.51e-14;9!CL:0000680;1.14e-11;7!CL:0000138;3.70e-10;6!CL:0000188;1.39e-08;9!CL:0000327;8.33e-08;15!CL:1000507;9.40e-08;10!CL:1000494;9.40e-08;10!CL:0000499;1.92e-07;28!CL:0000056;3.11e-07;4!CL:0002564;7.97e-07;3!CL:0002594;9.89e-07;4 | |||
|ontology_enrichment_celltype_v019_2=CL:0000153,2.16e-14,9;CL:0000447,2.16e-14,9;CL:0000058,3.19e-10,6;CL:0000138,3.19e-10,6;CL:0000188,1.24e-08,9;CL:0000327,7.68e-08,15;CL:1000507,9.84e-08,10;CL:1000494,9.84e-08,10;CL:0000499,1.88e-07,28;CL:0000515,2.86e-07,4;CL:0002564,6.99e-07,3 | |||
|ontology_enrichment_development_v019=CL:0000515;3.11e-07;4 | |||
|ontology_enrichment_disease=DOID:0050687!2.61e-08!143 | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002113!2.71e-10!27;UBERON:0003918!2.71e-10!27;UBERON:0005095!2.71e-10!27;UBERON:0007687!2.71e-10!27;UBERON:0001013!3.70e-10!14;UBERON:0000489!1.05e-09!32;UBERON:0001737!1.18e-09!9;UBERON:0004876!3.43e-08!20;UBERON:0000080!4.33e-08!18;UBERON:0002120!4.33e-08!18;UBERON:0004875!4.33e-08!18;UBERON:0005721!4.33e-08!18;UBERON:0005754!4.33e-08!18;UBERON:0007297!4.33e-08!18;UBERON:0006555!1.24e-07!17;UBERON:0005103!1.24e-07!17;UBERON:0000083!1.24e-07!17;UBERON:0009201!1.24e-07!17;UBERON:0004819!1.24e-07!17;UBERON:0006553!1.24e-07!17;UBERON:0003074!1.24e-07!17;UBERON:0003060!1.24e-07!17;UBERON:0009773!3.34e-07!12;UBERON:0001231!3.34e-07!12;UBERON:0004810!3.34e-07!12;UBERON:0004211!5.49e-07!16;UBERON:0001285!5.49e-07!16;UBERON:0007684!5.49e-07!16;UBERON:0003220!5.49e-07!16;UBERON:0004208!5.49e-07!16 | |||
|ontology_enrichment_uberon_v019=UBERON:0001134;1.30e-15;16!UBERON:0002036;1.30e-15;16!UBERON:0001737;9.78e-15;9!UBERON:0001557;9.78e-15;9!UBERON:0004905;1.20e-14;8!UBERON:0000982;1.20e-14;8!UBERON:0004770;1.20e-14;8!UBERON:0011135;1.57e-10;5!UBERON:0002216;1.57e-10;5!UBERON:0011134;1.57e-10;5!UBERON:0002209;1.57e-10;5!UBERON:0002213;1.57e-10;5!UBERON:0007844;1.57e-10;5!UBERON:0011138;1.57e-10;5!UBERON:0001130;1.57e-10;5!UBERON:0001066;1.57e-10;5!UBERON:0001468;1.57e-10;5!UBERON:0002113;6.33e-08;24!UBERON:0011143;6.33e-08;24!UBERON:0002204;7.91e-08;70!UBERON:0004211;9.40e-08;10!UBERON:0009773;9.40e-08;10!UBERON:0001231;9.40e-08;10!UBERON:0004810;9.40e-08;10!UBERON:0000489;2.38e-07;29!UBERON:0002385;2.50e-07;31!UBERON:0001015;2.50e-07;31!UBERON:0000383;2.50e-07;31!UBERON:0001013;7.90e-07;14!UBERON:0002242;7.97e-07;3!UBERON:0001310;9.89e-07;4 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001737,1.01e-14,9;UBERON:0004905,1.06e-14,8;UBERON:0000982,1.06e-14,8;UBERON:0004770,1.06e-14,8;UBERON:0003104,5.30e-13,160;UBERON:0009142,5.30e-13,160;UBERON:0011135,1.38e-10,5;UBERON:0002216,1.38e-10,5;UBERON:0011134,1.38e-10,5;UBERON:0002209,1.38e-10,5;UBERON:0002213,1.38e-10,5;UBERON:0005856,1.38e-10,5;UBERON:0005866,1.38e-10,5;UBERON:0005863,1.38e-10,5;UBERON:0007844,1.38e-10,5;UBERON:0011138,1.38e-10,5;UBERON:0001130,1.38e-10,5;UBERON:0001066,1.38e-10,5;UBERON:0001468,1.38e-10,5;UBERON:0007503,1.19e-08,78;UBERON:0002113,2.63e-08,26;UBERON:0003918,2.63e-08,26;UBERON:0011143,2.63e-08,26;UBERON:0005095,2.63e-08,26;UBERON:0007687,2.63e-08,26;UBERON:0000489,9.66e-08,31;UBERON:0004810,9.84e-08,10;UBERON:0000486,1.38e-07,83;UBERON:0002329,2.38e-07,71;UBERON:0003059,2.38e-07,71;UBERON:0007282,2.38e-07,71;UBERON:0004290,2.38e-07,71;UBERON:0009618,2.38e-07,71;UBERON:0003077,3.62e-07,72;UBERON:0007285,3.62e-07,72;UBERON:0006555,5.24e-07,16;UBERON:0004819,5.24e-07,16;UBERON:0007524,5.43e-07,73;UBERON:0002242,6.99e-07,3;UBERON:0003068,6.99e-07,3;UBERON:0002328,6.99e-07,3;UBERON:0004880,6.99e-07,3;UBERON:0001013,7.61e-07,14 | |||
|phase1_expression=0.363356758541113,0.214100523890983,0,3.00219895059391,0,0,7.59899634504932,2.52687949370732,8.61912573059467,0,0,0,0,23.5156070624089,20.2152399194029,0.672325146451775,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.605399502633369,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,6.86734389530676,8.02140657017423,3.91085601194224,8.74814541756209,4.37971383272372,0,0,0,0.523916301990851,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.24406205754817,0,0,0,0,0,0,0,0,0,0,0,8.44852317882041,0,0,0,0,0,0,0.24666754841716,0,0,0,0,0,0,0,0,4.78235777765763,3.87533845524424,3.0755859429945,5.05622904128095,0,0,0,0,0,11.8320977051943,3.59309070908119,0,0,0,0,0,0.150238058906597,0,0,0,0,0,0,1.54584324027377,5.21127197728451,5.73839529620305,19.3899640270785,0,0,0,0,0,5.08681776931463,0,0,0,0,0,0.116193942869518,0,0,0,0,0,0,0,0,8.16316920274923,7.08055698328027,5.54325368732009,6.06616850028167,4.35758888184812,6.16903609688851,3.50561401216427,4.51309369788296,5.38646019724947,0,0,0,0,0,0,0,0,0.245976877086227,0,0.109750285408626,1.1240175325762,0.301586917234893,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.126995788584338,0.763976851116555,0,1.71072446022705,0.102827492703324,0,0.285826432630578,0,0,0,1.42198887333556,3.57656445851882,0.845302752556,0.26593811658487,0,14.1464055844178,0,17.8502859940787,0,9.22456729165453,14.8183260620538,3.25736184293735,0,6.33561498346743,0,0,0,0,0,0,0,0,7.13184525203592,2.31650090668127,23.2188244481933,1.96967059563885,0,0,0,0,0,0,0,0,0,0,0,0,14.9683619897351,20.5069913634468,8.95174578209127,0,0,0,0,0,15.9185252839189,5.17365356462525,13.9487375692442,0.553107505625109,0.60818530127658,0,0,0,0,0,0,0,0.30239029332968,0,0,0,0,2.55853624533352,0,4.45254199334973,1.23367755042124,0.532685175939381,0.328508624055237,0,1.85936605535935,0,0,0,0,0.182091168006717,0,0.902399225814824,0.308061348417659,8.62784746094541,4.38417673959782,1.47772280450026,0,0,0.647747748306418,3.08454505380579,21.9466614410521,14.0473136679359,1.52925763827023,0.831076008928724,4.02974558499921,0,0,0,0,0,0,0.457847324091717,0.247528499761764,0,0,0,3.38347514022427,0.462145851343933,0.15350367472613,1.65403886981437,12.3533281598515,13.341535840109,1.78975917573812,5.34192213880424,0,0,0,0,0,0,0,1.23213432070436,0,0,0,0,0,0,0,0,0,0,0,0.179872457583315,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.24656603140326,3.40805847909725,3.09865162785466,15.3450146858335,5.79669341977415,3.21003946333125,0,2.11107635297664,2.96365403663912,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,22.7535271501518,2.88743956579008,0.245040215981032,0,0,0,0.318852545457645,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.19538809540204,0,0,0,0,0,0.935702702041099,0.586032717087576,0.849523652246594,0,0.284136146806413,0,0.296964680832639,0,0,0,0,0,14.5676531608315,0.996239941255349,0,0,0,0,0,0,0,0,0.0986434056369336,0,0,0,0,0,0,21.2527799990756,0,0,0,2.36387681767936,0,0.291604613383254,0.520874984799877,0,0,0,0,0,0,2.83240005149374,0.139423744278603,0.153900517007594,0,0,0,0.325942115766024,0,0,0,0,0,0,0,0,0,0,0,0,0,0.141353071433941,0,0,0,0,0,0,0.104421949505455,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.24807205711825,0,0.0979923974143777,0,2.27144668714639,0,0.483781656445426,0.950161122120412,0.903270027585302,0,2.91245218081951,0,0,0,0,2.93327074102205,0,0,0.19980960958213,4.03453168031497,0.458146384663663,0,0,0,0,0,0,1.4279750469085,0,0,0,0,0,0,0,0,0,0,0.429226048136571,0,0,0,1.16495949527454,0,0,0,0.688992370603241,0,0,0,0,0,0,0,0,0,0.670869375198532,3.46745112116472,16.1035585574444,0,0,0,0,0,0.25426853765475,0,0,0,0,0,0.170388021785422,0,0,0,0,0,0,0,0,0,0,0,0.197611631897944,0,0.638341257770182,0.544017803369474,1.0027595760908,0.306345576763462,1.63936315354902,0,0,0,0,0,0,0,0,0.124980407962107,0.303298235083296,0,0,0,5.36207805860053,0.597019211547496,0.701139929541673,0.554805861502613,0.947015026375446,4.77979013329893,10.6777346591584,0,0,0,0,0.159296767163702,0,0,0,0,0,0,0,0.406870733204662,0,0.107410557042488,0,0.398095888698616,0,9.95847545030099,10.4392341517435,0,0,0,0,0,0.231522474323834,0,0,0,0,0.176689145945881,0,0,0.256241518587947,0,0,0,0,0,0,0,0.245772908753719,0.633936370075881,0,0,0,0,0.552317850755522,0,0.622077260032973,0,0,0.157265941855896,0.109209638192014,0.848662649770126,4.46407332213534,0.991486114072017,0.558644917973244,0,0,0,0,0,0,0,0,0,0,0,0,0,0.490738592505128,0.589848616738702,0,0.115525666150338,0.381382095467167,0,8.75231377311609,0.601682626794058,1.0085253435176,0,0,0,1.03499260351932,0,0,0,0,0,0,4.96211178389294,1.05522746615772,0.127762427639595,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.863710364874486,0,0,0,13.6002467680707,14.6040948734167,0.801711364730253,0,0,0,0,0.118332000730565,0,0.423387050190929,0.4582137370881,0,0,0,3.63155864376399,0,5.82685953469105,6.7757452525123,9.27851545070559,2.91426595835484,0.233939463462106,0.198950775161368,0.594600453887843,0,0,0,0,0,0,0.2451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| ||
|short_description=p2@HOXC10 | |||
}} | }} |
Latest revision as of 04:30, 19 September 2015
Short description: | p2@HOXC10 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_2_at_HOXC10_5end |
Coexpression cluster: | C321_synovial_anaplastic_maxillary_glassy_keratoacanthoma_rhabdomyosarcoma_small |
Association with transcript: | 59bp_to_ENST00000303460_5end |
EntrezGene: | HOXC10 |
HGNC: | 5122 |
UniProt: | Q9NYD6 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
GAG secreting cell | 2.16e-14 | 9 |
carbohydrate secreting cell | 2.16e-14 | 9 |
chondroblast | 3.19e-10 | 6 |
chondrocyte | 3.19e-10 | 6 |
cell of skeletal muscle | 1.24e-08 | 9 |
extracellular matrix secreting cell | 7.68e-08 | 15 |
kidney tubule cell | 9.84e-08 | 10 |
nephron tubule epithelial cell | 9.84e-08 | 10 |
stromal cell | 1.88e-07 | 28 |
skeletal muscle myoblast | 2.86e-07 | 4 |
nucleus pulposus cell of intervertebral disc | 6.99e-07 | 3 |