FFCP PHASE1:Hg19::chr11:64949261..64949276,+: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
(2 intermediate revisions by the same user not shown) | |||
Line 1: | Line 1: | ||
{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=823 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=1476 | |||
|TSSclassifier=strong | |||
|UniProt= | |||
|association_with_transcript=0bp_to_ENST00000530442_5end | |||
|cluster_id=chr11:64949261..64949276,+ | |||
|description=CAGE_peak_3_at_CAPN1_5end | |||
|id=chr11:64949261..64949276,+ | |||
|ontology_enrichment_celltype=CL:0002076!4.89e-10!43;CL:0000066!1.31e-09!254;CL:0000223!1.06e-07!59;CL:1000449!1.11e-07!16 | |||
|ontology_enrichment_celltype_v019=CL:1000449;1.53e-08;15!CL:0002681;4.27e-07;12!CL:0002584;4.27e-07;12!CL:0002076;6.72e-07;42 | |||
|ontology_enrichment_celltype_v019_2=CL:0000066,4.60e-10,253;CL:0002076,5.72e-10,42;CL:1000449,7.94e-09,15;CL:0000223,1.63e-07,58;CL:0002681,2.71e-07,12;CL:0002584,2.71e-07,12 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0004119!2.07e-08!169;UBERON:0000925!2.07e-08!169;UBERON:0006595!2.07e-08!169;UBERON:0006555!4.67e-08!17;UBERON:0005103!4.67e-08!17;UBERON:0000083!4.67e-08!17;UBERON:0009201!4.67e-08!17;UBERON:0004819!4.67e-08!17;UBERON:0006553!4.67e-08!17;UBERON:0003074!4.67e-08!17;UBERON:0003060!4.67e-08!17;UBERON:0003887!8.04e-08!21;UBERON:0004211!1.11e-07!16;UBERON:0001285!1.11e-07!16;UBERON:0007684!1.11e-07!16;UBERON:0003220!1.11e-07!16;UBERON:0004208!1.11e-07!16;UBERON:0001444!2.72e-07!48;UBERON:0000080!5.15e-07!18;UBERON:0002120!5.15e-07!18;UBERON:0004875!5.15e-07!18;UBERON:0005721!5.15e-07!18;UBERON:0005754!5.15e-07!18;UBERON:0007297!5.15e-07!18;UBERON:0003104!6.67e-07!238;UBERON:0009142!6.67e-07!238 | |||
|ontology_enrichment_uberon_v019=UBERON:0006555;1.53e-08;15!UBERON:0004819;1.53e-08;15!UBERON:0001285;1.53e-08;15!UBERON:0007684;1.53e-08;15!UBERON:0006554;3.80e-07;30!UBERON:0001008;3.80e-07;30!UBERON:0001225;4.27e-07;12!UBERON:0008987;4.27e-07;12 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0006555,3.28e-09,16;UBERON:0004819,3.28e-09,16;UBERON:0004211,7.94e-09,15;UBERON:0009773,7.94e-09,15;UBERON:0001231,7.94e-09,15;UBERON:0001285,7.94e-09,15;UBERON:0007684,7.94e-09,15;UBERON:0004208,7.94e-09,15;UBERON:0004119,1.53e-08,160;UBERON:0000925,1.53e-08,160;UBERON:0006595,1.53e-08,160;UBERON:0006554,1.48e-07,47;UBERON:0003102,1.88e-07,99;UBERON:0001444,2.70e-07,49;UBERON:0001225,2.71e-07,12;UBERON:0008987,2.71e-07,12;UBERON:0001008,4.79e-07,48 | |||
|phase1_expression=1.99846217197612,1.49870366723688,0.845726424575827,2.00146596706261,0.893922188854576,1.74467704820074,0,2.52687949370732,1.56711376919903,5.16041266653169,8.37361401566913,2.62129646556207,2.63766978228454,5.321953177282,2.98257638155124,2.6893005858071,1.20538905604795,0.730310090387373,0.975865597581014,5.29420549730188,4.89601658986207,5.32873026512749,2.57612388417951,2.73748850145768,2.51085279189606,2.59805579543034,2.29881650459848,1.49550484495991,0.393364276848904,1.15148819429164,0.928896739896456,8.27479102031034,5.4217065380085,7.39508020333575,1.47187681102573,1.70603078984906,0.880801318004542,1.10799081706375,1.00272223735071,1.73608696572681,1.56740831967947,0.647787332037959,0.257575567634187,1.45398238779565,1.13362783106643,0.242584061187816,0.697287110717054,0.822335776043652,0.929119112685311,0.863077176966451,1.0246428261164,0.47296445977717,0.689491361473237,1.29096936716765,0,1.31769637679823,0.818718450173537,0.898893937780338,0.918251677112708,1.92557416245656,0.639337125799041,0.989553900560148,1.59570926097305,0.852449501065388,1.7412554317715,0.56738522469114,0.622822248995575,1.00499466102697,1.0429658368404,1.73751075764093,3.63239701580021,0.736555271975129,1.58231193720442,1.47878700418359,1.06302149982522,0.838634582033504,1.46027220490444,1.80212271409808,1.12507910687956,0.855038231223746,0.79566670879636,0.547992461293902,3.51992488922645,4.91524750135918,5.33705552318133,5.9742231159311,5.20514783146816,6.8970292794538,7.93253847341835,2.86216126360609,2.84606484554724,6.45960908308033,1.91136614062614,0,0,0.526768169550154,0.786839080455332,0,0.616804496998528,2.84217042164153,0.32592226663359,0.473447805734733,0,2.1167986808183,1.76763544484902,3.32300841875432,3.79125409271022,1.66518715643378,1.69077151827842,0.822189523018381,0.276350017785848,2.31842468588042,1.03800594213442,1.07016331235885,0,1.13309342697566,1.91610246800961,1.03088233644789,1.51811815211702,0.95569624297229,0,1.90090408889675,1.80690142893327,2.04778577847069,1.24930726552346,1.89421801635213,0.821127996921047,1.61285394579786,0.802320587350522,1.59306844271079,0,0.670700859703636,0.511450247374121,2.1686349143074,4.01070328508712,1.15877215168659,1.5905718941022,0.973269740605272,3.02511414925017,1.55210578223795,1.66886092816939,2.61958150995425,12.0217445136539,9.26961106961073,1.29818957461873,2.26368658489047,1.99436940778298,0.238490624305342,1.14398982156026,0,1.59009925893364,0,3.12426451446835,0,1.67799774483962,1.10047216776027,2.29894463190492,4.39308490587859,6.04802646567407,2.34304428935269,5.23678112241891,10.6438094800592,5.12530320851156,0.735326160691737,3.24056779152704,1.3394959242612,1.34717623575702,1.35133776579987,1.53316637465883,4.74632829784064,2.19842092716489,1.31780417436063,3.87780264148325,12.6467275121335,0.496971951695318,0.633152558322899,0.926864265692532,1.14734648299525,1.41867352879343,0,1.06748995729705,2.22000793575444,0.622422070799533,0.538842688278752,0.326923806226917,2.57307626996383,4.03323147135999,3.28050004567315,3.43376084513353,4.56377457235559,2.24173020827702,2.3486899728753,1.13311061057692,2.38766371393822,1.63323337003915,2.94802361548243,1.54988671763648,1.18800285728205,0.989067717114227,4.55080680969013,4.31170885089743,2.86171393721913,2.12701483782339,2.49357703935765,2.19488810440419,1.83892677479412,1.35214253015937,0.794025282120147,2.33206526395521,2.13557388818567,1.90738711043606,1.20036438433761,2.06105058476878,2.57640540045629,1.67505170698431,1.35021065793013,1.16924406193438,2.77677151668526,1.47279837827679,1.93975268182574,3.55009592516614,1.41052937518696,1.18692414617341,3.86521706326594,2.18196896472668,3.44165514466805,1.95157929807353,2.12047629314376,1.51052125730374,1.86589899027667,2.52320850875628,1.09493207722749,0,5.14592750554308,5.52539685409922,3.25057549622385,2.88751792667834,1.65629520055781,2.19160097101532,1.92808823906786,1.21323370005633,1.08939722046203,1.89816495288877,1.8876383142423,2.15843611637881,1.92373578473195,3.69077727312324,1.40241773803446,1.6462960453256,1.47008711385542,5.07020139287323,5.89696330006576,3.54473944008842,0.441463099414651,2.09080345523293,2.23038153388083,3.29250856225877,8.99214026060957,2.11110842064425,3.51836091602412,3.25808305310325,4.15973914111831,1.44331342025273,3.014190529352,1.29149563659404,5.63029146268188,5.09284063834272,5.13686211033415,1.58040879591855,0.858486162094873,0.492434012174795,1.40402559083543,1.63494278517601,3.74935335947108,2.85569617938061,5.2456785979683,2.4180801129769,2.90633938513962,9.20118429996507,0,0.088048434013226,0.829312462163088,0.144119953416961,0.25248486685276,2.34942208881025,4.58386110669933,11.7217447210047,3.4214489204541,1.95372236136315,2.10240140490742,3.42991719156694,4.37311228946907,4.3596006883328,3.0802080044799,0.517086863031111,10.7296933755565,2.535908257668,2.92531928243358,1.04007436911366,4.11531798819427,4.25547396069835,2.93064396917709,0.857867961948885,1.08524321078289,3.29296134712308,2.28015329005615,0.355391948742546,0,0.301439377059586,0.871533458600294,0.199945982364114,1.2162378064119,0.502257091432126,0,1.91699884393266,3.44585807502342,2.85273810081437,2.46128221334885,1.43833425785268,1.79060963239896,1.45710687191585,2.56139988262505,0.862510299438069,1.79680250791648,1.77866236955724,1.30139853857622,1.54657762555539,1.50764638800914,0,2.24702107184155,0,1.65766205374414,2.82190430954022,3.50119364741774,2.98391526069709,0.415941723061614,0.535286966391485,0.473107245101804,0.937131319941706,3.61135319673263,6.82222512167955,1.03473071292505,3.32112799267718,2.58116835958384,1.56390506042549,8.61525092836058,7.20601190002797,1.6541442089831,1.2942852049117,1.81436848265855,3.63753085735511,8.32177197552485,1.81434175997808,1.24053903909388,2.14846762603287,1.12264037773229,0.768834895534206,2.04682899626681,0.64341568457443,0,0.462629081407967,1.06537035187876,1.39616165223476,1.03850885836724,0.697262270759755,2.77976734060731,4.41114234667227,1.93370076765382,1.14814448164607,0.364182336013434,1.44236856455367,6.76799419361118,3.46569016969866,12.5495963068297,7.30696123266303,2.84989398010764,9.09867072567173,5.95327968467805,1.94324324491925,6.16909010761157,5.1479823133332,4.51520796469368,4.84264918785573,5.81753206250107,3.35812132083267,0.877039506583738,0.784306353074702,2.82095137628028,2.95213181129735,1.30151357865721,2.26690225624989,1.64825036673018,1.65018999841176,5.16838984196555,1.30012049207304,0,1.25671933779759,1.07834031980251,1.68854042198743,1.37836572484531,1.82614416276065,0.725083469571143,1.96021243057032,2.93805717634233,3.14041339185858,1.53752053892085,1.40373983744043,1.51736671283325,1.85938219718914,0,1.3940745403212,1.84820148105653,2.66153015158511,2.60979897622522,0.9266210955196,0.286249773483982,5.21021717103534,1.58189712359363,1.90630193923825,7.42103594802868,0.855877976067841,0.95460974377781,2.35484592059769,3.41757669408298,1.92175920815238,1.88499843753098,1.61745985258653,0,0.842516912477962,5.36397112998549,0.731140468893853,2.11300293513511,1.77449884830381,1.1312434556297,0,0.551365343546124,1.32687795048244,3.06915619677634,6.36653087693356,5.24715801637306,1.21746226177622,0.92947049429925,1.40847801266121,1.00387946542836,1.3754865741837,1.426684205925,1.41904425628239,0.844430541190656,0.987884678879706,2.65631221636001,4.19921664293979,4.52243929809907,8.04362730642945,5.44454924306613,2.07116361708914,3.87454835404107,5.05414427002877,5.32116184244011,2.06751060186264,2.53723804616085,2.29391162142713,2.84823593587081,1.42939065274673,2.05681136543097,1.29694662238543,2.70015718619057,2.37937552888281,1.28188885352968,3.84991942105343,4.16568367167754,5.945701604023,1.58696134274089,0.924843963529383,0.159426272728822,0.798317485731266,0.957526850661834,1.69338866179106,0.324621940274555,0.561594356226918,1.36940807419915,0.47003968731907,2.50634477090067,1.18504244461122,0.1605880751037,0.403599414382095,0.425846237690326,0.687010689511529,0.614481528616916,0.671028323677248,0.333698283423817,0.976940477010201,0.278406173895242,0,0,0,1.4098700508785,1.12284324244932,1.61158997199083,1.09224469574562,0.66866030566487,0.284136146806413,0.71623345421307,1.48482340416319,1.22864280839693,0.994147647766298,1.96937182974718,0.556543525114529,0.824019371133798,1.26675244876796,0.597743964753209,3.03912307084262,0,1.22722419002586,2.33861130376032,1.24415835064723,1.97710372524119,1.61119057208048,0.511572370226872,2.17015492401254,0,2.22273980289274,0,1.29875337426592,5.98841394003583,1.5625665665114,0.524759999977174,0,1.593108275997,2.79679015322043,1.65471377237555,4.82640722538051,0.291604613383254,0.347249989866585,0,0.723578631752448,0,1.10579259931225,0.295547618953547,1.09692698576986,1.63407695278485,8.08657716815899,3.30886111566327,0.113942055847001,0.922255617552241,1.52587995496613,0.760531603454056,0.638002319463839,1.64875668123352,1.5991043280559,0,0.156980256395025,0,0,0.19606253431774,0.335643173951685,0.189753732724185,0.635746315921515,0.843992258112108,0.816164040795739,0.989471500037586,1.94749775767882,0.995261931078505,1.85760885457012,2.4441205797345,0,0.617819694732514,0.417687798021821,1.01101699471016,2.40773294189637,1.87411556580271,2.18945747058799,12.1312063737896,2.67058417487502,0.789168805698781,1.20990716048664,2.44858209304392,2.40109002588254,0.150323419414493,0.622129148383483,3.32326936353593,0.661983911750998,0.627865836814451,0,2.84609546029793,1.10939738410511,10.2400245617727,4.40965788364699,4.17884191585932,3.66926003308263,1.37588825977293,1.16107597546902,0.950161122120412,1.14961639874493,6.59525312121252,1.412098027064,0.90392296312213,0.685209623233754,0.596143835108969,1.01297273529406,1.36885967914362,1.68333522528221,3.41524791582964,1.19885765749278,0.432271251462318,0.572682980829578,1.71594997861965,0.576219191952599,2.48505071130865,4.00679858848552,0.271808412147228,0.941425616810999,0.611989305817931,1.44475294950759,0,1.23214841002794,1.27746588066972,0.429765441419957,2.62887354279315,0.279282401272254,1.3749625440701,0,2.79550600698588,1.71690419254628,2.00854311697685,0.940568614814168,0.360299883542404,0,0.945398187686684,1.15382201733633,1.07845670166696,0.688992370603241,2.37085329784197,1.59045937961861,1.49823746722733,1.76828463311521,1.37539436597234,2.07720169014593,1.349843349309,0.77380195455795,1.94398581305679,2.34804281319486,3.07342258466873,2.6751839948849,1.47840471127169,0.537862017998534,1.15149118391667,0.714695326373367,0,1.27134268827375,2.17199840701485,0,1.95952416065645,0,1.23138781124008,1.5334921960688,0.453248366080503,5.8620893471233,2.65013777824443,1.80996138906171,0.79339561045614,1.19760786519031,2.81926008926669,2.56289790162467,1.41483874589699,0.828478110694391,1.48849806543585,2.17372795087739,4.99349653361673,3.19170628885091,1.63205341010842,0.5013797880454,1.53172788381731,1.63936315354902,0.942324577501406,1.77213635993397,0.854183854313742,1.001527445652,1.72022758707021,0.776503360757966,2.29756690883119,0.138348634936231,1.37478448758317,1.51649117541648,1.14186133417987,0.705797459094515,0.468334905806882,1.01444720027578,0.597019211547496,0.467426619694449,2.21922344601045,1.89403005275089,1.0062716070103,2.66943366478961,0.228840068396924,0.453692771289717,0.621748802331122,0.443565449968902,0.477890301491107,0.899606224327209,0.310525913752519,0,0.53168342911599,3.1304703708704,0.450772826991655,0.380805212168795,1.22061219961398,1.09109195521536,0.214821114084977,0,3.18476710958893,2.80019435264208,3.77735275701072,1.01024846629776,0,1.54095864325843,0.214441591374926,2.08795433572169,1.13352962756136,0.463044948647668,0.244736704506468,1.07453304648892,0.926404341482917,0.219284049578707,0,0,0.168942440653073,1.02496607435179,0.690860683462397,0.607719912354764,0.829550616910385,3.50748555910899,3.85308036908753,2.61704630809351,0.982829546539238,0.245772908753719,1.69049698686902,0.999936979274649,0.640150378164845,0.861074898304078,1.13503190713367,1.10463570151104,4.61602375474167,2.48830904013189,0.383683113910955,0,1.10086159299127,0.109209638192014,1.3578602396322,1.06287460050841,1.23935764259002,0.558644917973244,0,1.1829261750188,2.40171224485641,1.41070377476274,2.7562092961788,0.899209151350433,0,1.27707087245721,1.23069818544453,0.504143392443436,2.00556032146232,0.968853873791107,1.42769420259154,3.92590874004102,8.72975952773279,1.65085738669511,4.85207797831421,0.762764190934334,0,1.19349733269765,1.65462722368366,0.20170506870352,1.56302802246618,0.785720083444267,1.14640342257068,1.6264169483875,1.48582686160468,0.781078098613847,1.2401207790071,2.21955335678674,1.09394961803644,2.74128883428591,4.46590060550365,0.879356221798103,11.6263809152032,0,0,0.606965604236632,0.455324382702595,4.3464161379693,1.95897778844825,0.342976018874837,2.9906682509806,1.64431933907123,2.48207065856333,1.89093383216518,2.51177897121645,0.942693539496011,1.68163297988273,0.913158720509496,0.431855182437243,0.9555033757741,1.28657779517981,0.632054446930906,2.09234565662625,1.39086617842064,0.801711364730253,2.90102629828252,4.7801173586306,3.45629830907046,3.44181887056222,2.12997601315018,1.619054690424,0.423387050190929,5.0403511079691,4.03268301363616,5.7332336338646,1.56597604516909,2.55190607399632,1.46301509978723,5.82685953469105,8.31568735535601,0,0,1.63757624423474,3.780064728066,0.356760272332706,2.2589216407792,0.769583617218004,1.50962843566674,2.39239890134628,0,2.82190377816914,2.45148321753905,3.06379511232114,0.588925401344836,0,1.2679671827502,0.679708458751268,3.38342104727473,2.32048396704878,3.7977639251473,0.892769693028288,3.17605384544123,2.72820646743172,1.46067277649303,2.75237570042724,0.286679166302903,0,2.37970215668201,1.74540276136151,1.5870805215462,1.11598505450025,0.924351257262837,2.16313281061895,0.756998549010474,1.85751472338282,0.253397002022874,2.14176542458162,0.801652215796681,1.01084389488329,0.50141507858475,1.13668047327359,0.535928260312357,4.97501663675268,0.620597975171371,3.41174371041569,2.3806443146374,1.35636710655613,1.11734485732544,1.23345048838675,3.18235791390825,1.81905470062397,3.9189014621453,3.42233301085281,5.32081218815241,4.2316101181679,2.32862249582209,2.03508171527436,1.3874554964103,1.9307228228694,0.808426818959282,7.03922827210363,2.5670703278402,0.406896178315738,0.665756774185513,2.21401172950129,5.12909587685173 | |||
|short_description=p3@CAPN1 | |||
}} |
Latest revision as of 06:46, 19 September 2015
Short description: | p3@CAPN1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_3_at_CAPN1_5end |
Coexpression cluster: | NA |
Association with transcript: | 0bp_to_ENST00000530442_5end |
EntrezGene: | CAPN1 |
HGNC: | 1476 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
epithelial cell | 4.60e-10 | 253 |
endo-epithelial cell | 5.72e-10 | 42 |
epithelial cell of nephron | 7.94e-09 | 15 |
endodermal cell | 1.63e-07 | 58 |
kidney cortical cell | 2.71e-07 | 12 |
renal cortical epithelial cell | 2.71e-07 | 12 |
Ontology term | p-value | n |
---|---|---|
excretory tube | 3.28e-09 | 16 |
kidney epithelium | 3.28e-09 | 16 |
nephron epithelium | 7.94e-09 | 15 |
renal tubule | 7.94e-09 | 15 |
nephron tubule | 7.94e-09 | 15 |
nephron | 7.94e-09 | 15 |
uriniferous tubule | 7.94e-09 | 15 |
nephrogenic mesenchyme | 7.94e-09 | 15 |
endoderm-derived structure | 1.53e-08 | 160 |
endoderm | 1.53e-08 | 160 |
presumptive endoderm | 1.53e-08 | 160 |
urinary system structure | 1.48e-07 | 47 |
surface structure | 1.88e-07 | 99 |
subdivision of head | 2.70e-07 | 49 |
cortex of kidney | 2.71e-07 | 12 |
renal parenchyma | 2.71e-07 | 12 |
renal system | 4.79e-07 | 48 |