FFCP PHASE1:Hg19::chrX:119709377..119709392,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=8450 | |EntrezGene=8450 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=2555 | |HGNC=2555 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=0bp_to_ENST00000486604_5end | |association_with_transcript=0bp_to_ENST00000486604_5end | ||
|cluster_id=chrX:119709377..119709392,- | |||
|coexpression_cluster_id=C267 | |||
|description=CAGE_peak_16_at_CUL4B_5end | |description=CAGE_peak_16_at_CUL4B_5end | ||
|id=chrX:119709377..119709392,- | |id=chrX:119709377..119709392,- | ||
|ontology_enrichment_celltype=CL:0000039!2.19e-27!7;CL:0000586!2.19e-27!7;CL:0002322!1.32e-25!5;CL:0002541!1.74e-16!3 | |ontology_enrichment_celltype=CL:0000039!2.19e-27!7;CL:0000586!2.19e-27!7;CL:0002322!1.32e-25!5;CL:0002541!1.74e-16!3 | ||
|ontology_enrichment_celltype_v019=CL:0000039;2.78e-64;7!CL:0000586;2.78e-64;7!CL:0002541;1.79e-37;3!CL:0002322;1.06e-10;5!CL:0000349;1.24e-10;19 | |||
|ontology_enrichment_celltype_v019_2=CL:0000039,2.78e-64,7;CL:0000586,2.78e-64,7;CL:0002541,2.30e-37,3;CL:0002322,9.62e-11,5;CL:0000349,1.27e-10,19 | |||
|ontology_enrichment_development_v019=UBERON:0009117;1.54e-20;10!UBERON:0005564;1.54e-20;10 | |||
|ontology_enrichment_disease=DOID:3095!3.91e-11!22;DOID:2994!3.91e-11!22;DOID:1799!7.49e-07!1;DOID:10165!7.49e-07!1;DOID:1798!7.49e-07!1 | |||
|ontology_enrichment_disease_v019=DOID:3095;1.69e-27;22!DOID:2994;1.69e-27;22!DOID:1799;3.08e-14;1!DOID:10165;3.08e-14;1!DOID:1798;3.08e-14;1 | |||
|ontology_enrichment_disease_v019_2=DOID:3095,1.69e-27,22;DOID:2994,1.69e-27,22;DOID:1799,3.08e-14,1;DOID:10165,3.08e-14,1;DOID:1798,3.08e-14,1 | |||
|ontology_enrichment_uberon=UBERON:0000473!5.49e-23!8;UBERON:0003135!1.46e-16!11;UBERON:0000476!1.74e-16!3;UBERON:0000920!1.74e-16!3;UBERON:0003124!3.62e-12!7;UBERON:0005631!3.82e-09!14;UBERON:0000158!3.82e-09!14;UBERON:0000991!2.21e-08!21;UBERON:0009196!2.21e-08!21;UBERON:0009117!2.21e-08!21;UBERON:0005564!2.21e-08!21;UBERON:0004176!5.69e-08!22;UBERON:0003101!5.69e-08!22;UBERON:0000079!5.69e-08!22 | |||
|ontology_enrichment_uberon_v019=UBERON:0003124;1.79e-37;3!UBERON:0000920;1.79e-37;3!UBERON:0000473;1.41e-25;8!UBERON:0005631;6.21e-20;10!UBERON:0000158;6.21e-20;10!UBERON:0003135;1.06e-18;11!UBERON:0000991;6.35e-10;21!UBERON:0003101;1.76e-09;22!UBERON:0000079;1.76e-09;22!UBERON:0000478;1.83e-08;24!UBERON:0000922;8.04e-08;49 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000920,2.30e-37,3;UBERON:0000473,1.41e-25,8;UBERON:0003135,1.06e-18,11;UBERON:0003124,1.97e-16,7;UBERON:0005631,2.56e-14,14;UBERON:0000158,2.56e-14,14;UBERON:0000991,6.35e-10,21;UBERON:0009196,6.35e-10,21;UBERON:0009117,6.35e-10,21;UBERON:0005564,6.35e-10,21;UBERON:0004176,1.76e-09,22;UBERON:0003101,1.76e-09,22;UBERON:0000079,1.76e-09,22;UBERON:0000478,1.86e-08,24;UBERON:0002323,7.64e-07,46 | |||
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|short_description=p16@CUL4B | |short_description=p16@CUL4B | ||
}} | }} |
Latest revision as of 06:48, 19 September 2015
Short description: | p16@CUL4B |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_16_at_CUL4B_5end |
Coexpression cluster: | C267_pancreatic_placenta_choriocarcinoma_testicular_teratocarcinoma_chorionic_clear |
Association with transcript: | 0bp_to_ENST00000486604_5end |
EntrezGene: | CUL4B |
HGNC: | 2555 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
germ line cell | 2.78e-64 | 7 |
germ cell | 2.78e-64 | 7 |
chorionic membrane mesenchymal stem cell | 2.30e-37 | 3 |
embryonic stem cell | 9.62e-11 | 5 |
extraembryonic cell | 1.27e-10 | 19 |
Ontology term | p-value | n |
---|---|---|
egg chorion | 2.30e-37 | 3 |
testis | 1.41e-25 | 8 |
male reproductive organ | 1.06e-18 | 11 |
chorion | 1.97e-16 | 7 |
extraembryonic membrane | 2.56e-14 | 14 |
membranous layer | 2.56e-14 | 14 |
gonad | 6.35e-10 | 21 |
indifferent external genitalia | 6.35e-10 | 21 |
indifferent gonad | 6.35e-10 | 21 |
gonad primordium | 6.35e-10 | 21 |
external genitalia | 1.76e-09 | 22 |
male organism | 1.76e-09 | 22 |
male reproductive system | 1.76e-09 | 22 |
extraembryonic structure | 1.86e-08 | 24 |
body cavity | 7.64e-07 | 46 |
Ontology term | p-value | n |
---|---|---|
germ cell and embryonal cancer | 1.69e-27 | 22 |
germ cell cancer | 1.69e-27 | 22 |
islet cell tumor | 3.08e-14 | 1 |
endocrine pancreas cancer | 3.08e-14 | 1 |
pancreatic endocrine carcinoma | 3.08e-14 | 1 |