FFCP PHASE1:Hg19::chr11:64950801..64950829,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=823 | |EntrezGene=823 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=1476 | |HGNC=1476 | ||
|TSSclassifier=strong | |||
|UniProt=E9PL37 | |UniProt=E9PL37 | ||
|association_with_transcript=0bp_to_ENST00000526468_5end | |association_with_transcript=0bp_to_ENST00000526468_5end | ||
|cluster_id=chr11:64950801..64950829,+ | |||
|description=CAGE_peak_12_at_CAPN1_5end | |description=CAGE_peak_12_at_CAPN1_5end | ||
|id=chr11:64950801..64950829,+ | |id=chr11:64950801..64950829,+ | ||
|ontology_enrichment_celltype=CL:0002076!6.79e-30!43;CL:0000066!7.29e-26!254;CL:0000223!1.10e-22!59;CL:0002368!2.83e-16!13;CL:0002251!8.53e-15!21;CL:0002159!2.54e-13!13;CL:0002202!2.26e-10!9;CL:0002632!2.26e-10!9;CL:0000622!1.18e-09!5;CL:0000076!8.81e-09!62;CL:0000362!4.39e-08!8;CL:0000154!5.95e-08!6;CL:0002077!1.26e-07!33;CL:0000240!1.43e-07!6;CL:0000311!1.43e-07!6;CL:0000079!1.43e-07!6;CL:0000237!1.43e-07!6;CL:0000036!1.43e-07!6;CL:0000357!1.43e-07!6;CL:0000114!1.43e-07!6;CL:0002328!2.29e-07!3;CL:0000068!7.87e-07!3;CL:0000069!7.87e-07!3;CL:0000307!7.87e-07!3;CL:0000377!7.87e-07!3 | |ontology_enrichment_celltype=CL:0002076!6.79e-30!43;CL:0000066!7.29e-26!254;CL:0000223!1.10e-22!59;CL:0002368!2.83e-16!13;CL:0002251!8.53e-15!21;CL:0002159!2.54e-13!13;CL:0002202!2.26e-10!9;CL:0002632!2.26e-10!9;CL:0000622!1.18e-09!5;CL:0000076!8.81e-09!62;CL:0000362!4.39e-08!8;CL:0000154!5.95e-08!6;CL:0002077!1.26e-07!33;CL:0000240!1.43e-07!6;CL:0000311!1.43e-07!6;CL:0000079!1.43e-07!6;CL:0000237!1.43e-07!6;CL:0000036!1.43e-07!6;CL:0000357!1.43e-07!6;CL:0000114!1.43e-07!6;CL:0002328!2.29e-07!3;CL:0000068!7.87e-07!3;CL:0000069!7.87e-07!3;CL:0000307!7.87e-07!3;CL:0000377!7.87e-07!3 | ||
|ontology_enrichment_celltype_v019=CL:0002159;2.30e-24;14!CL:0002076;2.42e-16;42!CL:0002328;2.22e-15;3!CL:0002202;2.35e-13;9!CL:0002632;2.35e-13;9!CL:0002368;1.06e-12;13!CL:0000362;5.19e-12;9!CL:0002251;1.10e-10;20!CL:0000575;2.10e-10;2!CL:0000317;9.61e-10;2!CL:1000448;9.61e-10;2!CL:0002308;9.61e-10;2!CL:0002140;9.61e-10;2!CL:0000622;1.21e-08;5!CL:0000312;1.87e-08;5!CL:0002077;2.10e-08;34!CL:0000307;2.36e-07;3!CL:0000154;2.83e-07;6!CL:0000240;4.06e-07;6!CL:0000311;4.06e-07;6!CL:0000079;4.06e-07;6!CL:0000237;4.06e-07;6!CL:0002166;5.52e-07;3!CL:0002621;5.52e-07;3 | |||
|ontology_enrichment_celltype_v019_2=CL:0002159,2.38e-24,14;CL:0002076,8.16e-22,42;CL:0000223,2.89e-19,58;CL:0000066,4.25e-16,253;CL:0002328,1.59e-15,3;CL:0002202,2.42e-13,9;CL:0002632,2.42e-13,9;CL:0002368,1.29e-12,13;CL:0000362,5.14e-12,9;CL:0002251,9.99e-11,20;CL:0000575,1.92e-10,2;CL:0000317,8.03e-10,2;CL:1000448,8.03e-10,2;CL:0002308,8.03e-10,2;CL:0002140,8.03e-10,2;CL:0000076,1.59e-09,63;CL:0002077,3.99e-09,34;CL:0000622,1.18e-08,5;CL:0000312,2.06e-08,5;CL:0000154,2.77e-07,6;CL:0000068,3.04e-07,3;CL:0000069,3.04e-07,3;CL:0000307,3.04e-07,3;CL:0000377,3.04e-07,3;CL:0000240,4.39e-07,6;CL:0000311,4.39e-07,6;CL:0000079,4.39e-07,6;CL:0000237,4.39e-07,6;CL:0000036,4.39e-07,6;CL:0000357,4.39e-07,6;CL:0000114,4.39e-07,6;CL:0002621,5.78e-07,3;CL:0002166,6.14e-07,3 | |||
|ontology_enrichment_development_v019=CL:0000223;2.24e-10;58!CL:0000377;2.36e-07;3!CL:0000357;4.06e-07;6!CL:0000114;4.06e-07;6 | |||
|ontology_enrichment_disease=DOID:1749!3.58e-20!14;DOID:305!2.53e-09!106 | |ontology_enrichment_disease=DOID:1749!3.58e-20!14;DOID:305!2.53e-09!106 | ||
|ontology_enrichment_disease_v019=DOID:1749;1.39e-11;14 | |||
|ontology_enrichment_disease_v019_2=DOID:1749,1.16e-11,14 | |||
|ontology_enrichment_uberon=UBERON:0001004!2.73e-17!72;UBERON:0004119!2.74e-16!169;UBERON:0000925!2.74e-16!169;UBERON:0006595!2.74e-16!169;UBERON:0000161!1.76e-12!35;UBERON:0007196!4.53e-12!14;UBERON:0001558!4.53e-12!14;UBERON:0000065!6.80e-12!53;UBERON:0001007!4.79e-11!155;UBERON:0001555!4.79e-11!155;UBERON:0007026!4.79e-11!155;UBERON:0000344!6.49e-11!12;UBERON:0000166!9.75e-11!21;UBERON:0000464!2.84e-10!104;UBERON:0005178!3.27e-10!34;UBERON:0002224!3.27e-10!34;UBERON:0005181!8.47e-10!35;UBERON:0003729!1.02e-09!5;UBERON:0003126!2.56e-09!7;UBERON:0001005!2.56e-09!7;UBERON:0000072!2.70e-09!46;UBERON:0000077!8.87e-09!130;UBERON:0000165!1.24e-08!28;UBERON:0000930!1.24e-08!28;UBERON:0005631!1.96e-08!14;UBERON:0000158!1.96e-08!14;UBERON:0003102!2.04e-08!95;UBERON:0003343!2.82e-08!4;UBERON:0004785!2.82e-08!4;UBERON:0004921!5.36e-08!129;UBERON:0004185!5.36e-08!129;UBERON:0004807!6.54e-08!28;UBERON:0000974!7.99e-08!10;UBERON:0000466!1.20e-07!126;UBERON:0005153!1.65e-07!37;UBERON:0004815!2.29e-07!3;UBERON:0002031!2.29e-07!3;UBERON:0000064!6.68e-07!219;UBERON:0005911!8.91e-07!82 | |ontology_enrichment_uberon=UBERON:0001004!2.73e-17!72;UBERON:0004119!2.74e-16!169;UBERON:0000925!2.74e-16!169;UBERON:0006595!2.74e-16!169;UBERON:0000161!1.76e-12!35;UBERON:0007196!4.53e-12!14;UBERON:0001558!4.53e-12!14;UBERON:0000065!6.80e-12!53;UBERON:0001007!4.79e-11!155;UBERON:0001555!4.79e-11!155;UBERON:0007026!4.79e-11!155;UBERON:0000344!6.49e-11!12;UBERON:0000166!9.75e-11!21;UBERON:0000464!2.84e-10!104;UBERON:0005178!3.27e-10!34;UBERON:0002224!3.27e-10!34;UBERON:0005181!8.47e-10!35;UBERON:0003729!1.02e-09!5;UBERON:0003126!2.56e-09!7;UBERON:0001005!2.56e-09!7;UBERON:0000072!2.70e-09!46;UBERON:0000077!8.87e-09!130;UBERON:0000165!1.24e-08!28;UBERON:0000930!1.24e-08!28;UBERON:0005631!1.96e-08!14;UBERON:0000158!1.96e-08!14;UBERON:0003102!2.04e-08!95;UBERON:0003343!2.82e-08!4;UBERON:0004785!2.82e-08!4;UBERON:0004921!5.36e-08!129;UBERON:0004185!5.36e-08!129;UBERON:0004807!6.54e-08!28;UBERON:0000974!7.99e-08!10;UBERON:0000466!1.20e-07!126;UBERON:0005153!1.65e-07!37;UBERON:0004815!2.29e-07!3;UBERON:0002031!2.29e-07!3;UBERON:0000064!6.68e-07!219;UBERON:0005911!8.91e-07!82 | ||
|ontology_enrichment_uberon_v019=UBERON:0004815;2.22e-15;3!UBERON:0002031;2.22e-15;3!UBERON:0006562;1.96e-10;2!UBERON:0002419;9.61e-10;2!UBERON:0007771;9.61e-10;2!UBERON:0003297;9.61e-10;2!UBERON:0001821;9.61e-10;2!UBERON:0003487;9.61e-10;2!UBERON:0001820;9.61e-10;2!UBERON:0002185;2.09e-09;5!UBERON:0000161;3.84e-08;19!UBERON:0000166;3.84e-08;19!UBERON:0007196;6.97e-08;15!UBERON:0001558;6.97e-08;15!UBERON:0001043;2.36e-07;3!UBERON:0001003;4.11e-07;15!UBERON:0007376;4.11e-07;15!UBERON:0000165;4.44e-07;28!UBERON:0001949;5.52e-07;3!UBERON:0000485;7.96e-07;7 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0004815,1.59e-15,3;UBERON:0002031,1.59e-15,3;UBERON:0002419,8.03e-10,2;UBERON:0007771,8.03e-10,2;UBERON:0003297,8.03e-10,2;UBERON:0001821,8.03e-10,2;UBERON:0003487,8.03e-10,2;UBERON:0001820,8.03e-10,2;UBERON:0005089,8.03e-10,2;UBERON:0005088,8.03e-10,2;UBERON:0002185,1.72e-09,5;UBERON:0000166,2.38e-09,22;UBERON:0003102,2.47e-09,99;UBERON:0007196,7.08e-08,15;UBERON:0001558,7.08e-08,15;UBERON:0001004,7.38e-08,74;UBERON:0004119,7.61e-08,160;UBERON:0000925,7.61e-08,160;UBERON:0006595,7.61e-08,160;UBERON:0000033,9.34e-08,56;UBERON:0001043,2.44e-07,3;UBERON:0009143,2.44e-07,3;UBERON:0001003,4.09e-07,15;UBERON:0007376,4.09e-07,15;UBERON:0007383,4.09e-07,15;UBERON:0001949,5.78e-07,3;UBERON:0000161,6.31e-07,36;UBERON:0000165,7.20e-07,29;UBERON:0000930,7.20e-07,29;UBERON:0000153,8.29e-07,62;UBERON:0007811,8.29e-07,62 | |||
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| ||
|short_description=p12@CAPN1 | |short_description=p12@CAPN1 | ||
}} | }} |
Latest revision as of 06:51, 19 September 2015
Short description: | p12@CAPN1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_12_at_CAPN1_5end |
Coexpression cluster: | NA |
Association with transcript: | 0bp_to_ENST00000526468_5end |
EntrezGene: | CAPN1 |
HGNC: | 1476 |
UniProt: | E9PL37 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
lower respiratory tract epithelium | 1.59e-15 | 3 |
epithelium of bronchus | 1.59e-15 | 3 |
skin gland | 8.03e-10 | 2 |
epidermis gland | 8.03e-10 | 2 |
gland of integumental system | 8.03e-10 | 2 |
sebaceous gland | 8.03e-10 | 2 |
skin sebaceous gland | 8.03e-10 | 2 |
sweat gland | 8.03e-10 | 2 |
sweat gland placode | 8.03e-10 | 2 |
sebaceous gland placode | 8.03e-10 | 2 |
bronchus | 1.72e-09 | 5 |
oral opening | 2.38e-09 | 22 |
surface structure | 2.47e-09 | 99 |
tracheobronchial tree | 7.08e-08 | 15 |
lower respiratory tract | 7.08e-08 | 15 |
respiratory system | 7.38e-08 | 74 |
endoderm-derived structure | 7.61e-08 | 160 |
endoderm | 7.61e-08 | 160 |
presumptive endoderm | 7.61e-08 | 160 |
head | 9.34e-08 | 56 |
esophagus | 2.44e-07 | 3 |
esophageal region | 2.44e-07 | 3 |
skin epidermis | 4.09e-07 | 15 |
outer epithelium | 4.09e-07 | 15 |
enveloping layer of ectoderm | 4.09e-07 | 15 |
gingival epithelium | 5.78e-07 | 3 |
orifice | 6.31e-07 | 36 |
mouth | 7.20e-07 | 29 |
stomodeum | 7.20e-07 | 29 |
anterior region of body | 8.29e-07 | 62 |
craniocervical region | 8.29e-07 | 62 |
Ontology term | p-value | n |
---|---|---|
squamous cell carcinoma | 1.16e-11 | 14 |