FFCP PHASE1:Hg19::chr7:66395596..66395607,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=55069 | |EntrezGene=55069 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=25476 | |HGNC=25476 | ||
|TSSclassifier=strong | |||
|UniProt=F8WE75 | |UniProt=F8WE75 | ||
|association_with_transcript=0bp_to_ENST00000424964_5end | |association_with_transcript=0bp_to_ENST00000424964_5end | ||
|cluster_id=chr7:66395596..66395607,+ | |||
|coexpression_cluster_id=C1 | |||
|description=CAGE_peak_20_at_C7orf42_5end | |description=CAGE_peak_20_at_C7orf42_5end | ||
|id=chr7:66395596..66395607,+ | |id=chr7:66395596..66395607,+ | ||
|ontology_enrichment_celltype=CL:0000148!2.14e-11!10;CL:0000541!2.14e-11!10;CL:0002322!2.68e-11!5;CL:0000540!4.18e-09!6;CL:0000031!4.18e-09!6;CL:0000404!4.18e-09!6;CL:0000133!1.59e-08!59;CL:0002319!3.55e-08!25;CL:0000147!6.16e-08!14;CL:0000221!1.37e-07!71;CL:0000333!6.63e-07!41;CL:0000047!7.97e-07!8 | |ontology_enrichment_celltype=CL:0000148!2.14e-11!10;CL:0000541!2.14e-11!10;CL:0002322!2.68e-11!5;CL:0000540!4.18e-09!6;CL:0000031!4.18e-09!6;CL:0000404!4.18e-09!6;CL:0000133!1.59e-08!59;CL:0002319!3.55e-08!25;CL:0000147!6.16e-08!14;CL:0000221!1.37e-07!71;CL:0000333!6.63e-07!41;CL:0000047!7.97e-07!8 | ||
|ontology_enrichment_celltype_v019= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_development_v019=UBERON:0009117;4.58e-23;10!UBERON:0005564;4.58e-23;10!UBERON:0010122;1.29e-13;2!UBERON:0003056;1.19e-09;3 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0001869!4.02e-30!32;UBERON:0002791!4.33e-29!33;UBERON:0005743!4.43e-29!86;UBERON:0001017!1.60e-28!82;UBERON:0002020!4.06e-28!34;UBERON:0003528!4.06e-28!34;UBERON:0001893!4.06e-28!34;UBERON:0000073!1.31e-25!94;UBERON:0001016!1.31e-25!94;UBERON:0000955!1.46e-25!69;UBERON:0006238!1.46e-25!69;UBERON:0002780!3.47e-25!41;UBERON:0001890!3.47e-25!41;UBERON:0006240!3.47e-25!41;UBERON:0003080!1.77e-24!42;UBERON:0001049!1.07e-20!57;UBERON:0005068!1.07e-20!57;UBERON:0006241!1.07e-20!57;UBERON:0007135!1.07e-20!57;UBERON:0000956!1.85e-20!25;UBERON:0000203!1.85e-20!25;UBERON:0002619!3.14e-20!22;UBERON:0002616!8.04e-20!59;UBERON:0003056!2.25e-19!61;UBERON:0001950!4.57e-19!20;UBERON:0000033!3.23e-15!123;UBERON:0003075!6.45e-15!86;UBERON:0007284!6.45e-15!86;UBERON:0007023!6.99e-15!115;UBERON:0000153!3.51e-14!129;UBERON:0007811!3.51e-14!129;UBERON:0001871!3.65e-14!7;UBERON:0002346!5.33e-14!90;UBERON:0000369!9.23e-14!4;UBERON:0002435!9.23e-14!4;UBERON:0000204!9.23e-14!4;UBERON:0010082!9.23e-14!4;UBERON:0004121!6.22e-13!169;UBERON:0002420!8.51e-13!9;UBERON:0007245!8.51e-13!9;UBERON:0010009!8.51e-13!9;UBERON:0010011!8.51e-13!9;UBERON:0000454!8.51e-13!9;UBERON:0000924!1.88e-12!173;UBERON:0006601!1.88e-12!173;UBERON:0009663!8.56e-12!7;UBERON:0005383!2.90e-11!3;UBERON:0005382!2.90e-11!3;UBERON:0002771!1.03e-10!3;UBERON:0002308!4.30e-09!9;UBERON:0000125!4.30e-09!9;UBERON:0000200!7.69e-09!6;UBERON:0001873!3.31e-08!2;UBERON:0010122!3.31e-08!2 | |||
|ontology_enrichment_uberon_v019=UBERON:0001873;1.29e-13;2!UBERON:0000473;1.51e-13;8!UBERON:0000991;2.22e-11;21!UBERON:0003135;4.03e-10;11!UBERON:0005383;1.60e-09;3!UBERON:0005382;1.60e-09;3!UBERON:0000369;1.86e-07;4!UBERON:0002435;1.86e-07;4!UBERON:0000204;1.86e-07;4 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001873,1.37e-13,2;UBERON:0010122,1.37e-13,2;UBERON:0000473,1.51e-13,8;UBERON:0000991,2.34e-11,21;UBERON:0009196,2.34e-11,21;UBERON:0009117,2.34e-11,21;UBERON:0005564,2.34e-11,21;UBERON:0004176,7.16e-11,22;UBERON:0003135,4.03e-10,11;UBERON:0005383,1.67e-09,3;UBERON:0005382,1.67e-09,3;UBERON:0000369,1.92e-07,4;UBERON:0002435,1.92e-07,4;UBERON:0000204,1.92e-07,4;UBERON:0010082,1.92e-07,4 | |||
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| ||
|short_description=p20@C7orf42 | |short_description=p20@C7orf42 | ||
}} | }} |
Latest revision as of 06:53, 19 September 2015
Short description: | p20@C7orf42 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_20_at_C7orf42_5end |
Coexpression cluster: | C1_testis_epididymis_embryonic_medulla_pituitary_trachea_caudate |
Association with transcript: | 0bp_to_ENST00000424964_5end |
EntrezGene: | C7orf42 |
HGNC: | 25476 |
UniProt: | F8WE75 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
caudate nucleus | 1.37e-13 | 2 |
future caudate nucleus | 1.37e-13 | 2 |
testis | 1.51e-13 | 8 |
gonad | 2.34e-11 | 21 |
indifferent external genitalia | 2.34e-11 | 21 |
indifferent gonad | 2.34e-11 | 21 |
gonad primordium | 2.34e-11 | 21 |
external genitalia | 7.16e-11 | 22 |
male reproductive organ | 4.03e-10 | 11 |
caudate-putamen | 1.67e-09 | 3 |
dorsal striatum | 1.67e-09 | 3 |
corpus striatum | 1.92e-07 | 4 |
striatum | 1.92e-07 | 4 |
ventral part of telencephalon | 1.92e-07 | 4 |
future corpus striatum | 1.92e-07 | 4 |