FFCP PHASE1:Hg19::chr3:101504175..101504196,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=91775 | |EntrezGene=91775 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=28238 | |HGNC=28238 | ||
|TSSclassifier=strong | |||
|UniProt=Q969Y0 | |UniProt=Q969Y0 | ||
|association_with_transcript=-47bp_to_ENST00000422132_5end | |association_with_transcript=-47bp_to_ENST00000422132_5end | ||
|cluster_id=chr3:101504175..101504196,+ | |||
|description=CAGE_peak_7_at_FAM55C_5end | |description=CAGE_peak_7_at_FAM55C_5end | ||
|id=chr3:101504175..101504196,+ | |id=chr3:101504175..101504196,+ | ||
|ontology_enrichment_celltype=CL:0002274!4.63e-13!5;CL:0000457!4.63e-13!5;CL:0002191!4.63e-13!5;CL:0000097!4.63e-13!5;CL:0000831!4.63e-13!5;CL:0002028!4.63e-13!5;CL:0000763!3.31e-08!112;CL:0000049!3.31e-08!112;CL:0000163!5.51e-07!9 | |ontology_enrichment_celltype=CL:0002274!4.63e-13!5;CL:0000457!4.63e-13!5;CL:0002191!4.63e-13!5;CL:0000097!4.63e-13!5;CL:0000831!4.63e-13!5;CL:0002028!4.63e-13!5;CL:0000763!3.31e-08!112;CL:0000049!3.31e-08!112;CL:0000163!5.51e-07!9 | ||
|ontology_enrichment_celltype_v019=CL:0000097;8.06e-53;5!CL:0000163;2.14e-29;9!CL:0000151;8.34e-07;36 | |||
|ontology_enrichment_celltype_v019_2=CL:0000097,4.74e-53,5;CL:0002028,4.74e-53,5;CL:0000163,1.60e-29,9;CL:0000763,1.68e-14,108;CL:0000049,1.68e-14,108;CL:0000839,3.18e-09,66;CL:0002032,4.13e-09,161;CL:0000837,4.13e-09,161;CL:0000557,4.49e-09,67;CL:0000037,1.19e-08,168;CL:0000766,2.18e-08,72;CL:0000988,4.13e-08,177;CL:0000151,2.58e-07,36 | |||
|ontology_enrichment_development_v019=UBERON:0005062;2.77e-11;4!UBERON:0007284;2.77e-11;4 | |||
|ontology_enrichment_disease=DOID:8692!4.57e-07!31 | |||
|ontology_enrichment_disease_v019=DOID:8692;3.93e-20;31!DOID:1240;1.45e-13;39!DOID:2531;1.18e-08;51!DOID:0060083;1.18e-08;51 | |||
|ontology_enrichment_disease_v019_2=DOID:8692,7.25e-21,31;DOID:1240,2.08e-16,39;DOID:2531,2.46e-12,51;DOID:0060083,2.46e-12,51 | |||
|ontology_enrichment_uberon=UBERON:0007023!9.28e-23!115;UBERON:0003978!9.86e-08!3;UBERON:0009751!9.86e-08!3;UBERON:0000946!9.86e-08!3;UBERON:0002523!9.86e-08!3;UBERON:0005983!9.86e-08!3;UBERON:0002165!9.86e-08!3;UBERON:0002062!9.86e-08!3;UBERON:0007280!9.86e-08!3 | |||
|ontology_enrichment_uberon_v019=UBERON:0002133;1.40e-21;2!UBERON:0003978;9.96e-15;3!UBERON:0000946;9.96e-15;3!UBERON:0002135;1.13e-11;1!UBERON:0002134;1.13e-11;1!UBERON:0002171;1.13e-11;1!UBERON:0005208;1.13e-11;1!UBERON:0006518;1.13e-11;1!UBERON:0008949;1.13e-11;1!UBERON:0004145;1.13e-11;1!UBERON:0005946;1.13e-11;1!UBERON:0000101;1.13e-11;1!UBERON:0005965;1.13e-11;1!UBERON:0002167;1.13e-11;1!UBERON:0002078;1.13e-11;1 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002133,1.92e-21,2;UBERON:0003978,1.23e-14,3;UBERON:0009751,1.23e-14,3;UBERON:0000946,1.23e-14,3;UBERON:0002523,1.23e-14,3;UBERON:0005983,1.23e-14,3;UBERON:0002165,1.23e-14,3;UBERON:0002062,1.23e-14,3;UBERON:0007280,1.23e-14,3;UBERON:0002134,1.07e-11,1;UBERON:0005208,1.07e-11,1;UBERON:0005946,1.07e-11,1;UBERON:0005965,1.07e-11,1;UBERON:0002078,1.07e-11,1;UBERON:0002171,1.47e-11,1;UBERON:0006518,1.47e-11,1;UBERON:0008949,1.47e-11,1;UBERON:0000101,1.47e-11,1;UBERON:0002167,1.47e-11,1;UBERON:0002135,1.63e-11,1;UBERON:0002371,6.68e-08,76;UBERON:0001474,2.92e-07,82;UBERON:0004797,8.84e-07,7 | |||
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| ||
|short_description=p7@FAM55C | |short_description=p7@FAM55C | ||
}} | }} |
Latest revision as of 07:07, 19 September 2015
Short description: | p7@FAM55C |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_7_at_FAM55C_5end |
Coexpression cluster: | NA |
Association with transcript: | -47bp_to_ENST00000422132_5end |
EntrezGene: | FAM55C |
HGNC: | 28238 |
UniProt: | Q969Y0 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
mast cell | 4.74e-53 | 5 |
basophil mast progenitor cell | 4.74e-53 | 5 |
endocrine cell | 1.60e-29 | 9 |
myeloid cell | 1.68e-14 | 108 |
common myeloid progenitor | 1.68e-14 | 108 |
myeloid lineage restricted progenitor cell | 3.18e-09 | 66 |
hematopoietic oligopotent progenitor cell | 4.13e-09 | 161 |
hematopoietic multipotent progenitor cell | 4.13e-09 | 161 |
granulocyte monocyte progenitor cell | 4.49e-09 | 67 |
hematopoietic stem cell | 1.19e-08 | 168 |
myeloid leukocyte | 2.18e-08 | 72 |
hematopoietic cell | 4.13e-08 | 177 |
secretory cell | 2.58e-07 | 36 |
Ontology term | p-value | n |
---|---|---|
atrioventricular valve | 1.92e-21 | 2 |
valve | 1.23e-14 | 3 |
cardiac mesenchyme | 1.23e-14 | 3 |
cardial valve | 1.23e-14 | 3 |
tunica intima | 1.23e-14 | 3 |
heart layer | 1.23e-14 | 3 |
endocardium | 1.23e-14 | 3 |
endocardial cushion | 1.23e-14 | 3 |
presumptive endocardium | 1.23e-14 | 3 |
tricuspid valve | 1.07e-11 | 1 |
right atrium valve | 1.07e-11 | 1 |
outflow tract of atrium | 1.07e-11 | 1 |
outflow part of right atrium | 1.07e-11 | 1 |
right cardiac atrium | 1.07e-11 | 1 |
lower lobe of right lung | 1.47e-11 | 1 |
right lung lobe | 1.47e-11 | 1 |
lower lobe of lung | 1.47e-11 | 1 |
lobe of lung | 1.47e-11 | 1 |
right lung | 1.47e-11 | 1 |
mitral valve | 1.63e-11 | 1 |
bone marrow | 6.68e-08 | 76 |
bone element | 2.92e-07 | 82 |
blood vessel layer | 8.84e-07 | 7 |
Ontology term | p-value | n |
---|---|---|
myeloid leukemia | 7.25e-21 | 31 |
leukemia | 2.08e-16 | 39 |
hematologic cancer | 2.46e-12 | 51 |
immune system cancer | 2.46e-12 | 51 |