FFCP PHASE1:Hg19::chr14:23310729..23310768,+: Difference between revisions
From FANTOM5_SSTAR
m (moved FFCP PHASE1 hg19::chr14:23310729..23310768,+ to FFCP PHASE1:Hg19::chr14:23310729..23310768,+: NSchange) |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=4323 | |EntrezGene=4323 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=7160 | |HGNC=7160 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=-61bp_to_ENST00000547596_5end | |||
|cluster_id=chr14:23310729..23310768,+ | |||
|coexpression_cluster_id=C2289 | |||
|description=CAGE_peak_6_at_MMP14_5end | |||
|id=chr14:23310729..23310768,+ | |||
|ontology_enrichment_celltype=CL:0000055!1.20e-27!180;CL:0000183!4.54e-17!59;CL:0000680!5.72e-16!57;CL:0000056!5.72e-16!57;CL:0000355!5.72e-16!57;CL:0002371!1.20e-15!591;CL:0000192!2.29e-15!42;CL:0000514!2.29e-15!42;CL:0000187!2.45e-15!54;CL:0000144!2.46e-13!625;CL:0000393!2.94e-13!60;CL:0000211!2.94e-13!60;CL:0000359!3.94e-13!32;CL:0000220!1.45e-12!246;CL:0002321!2.02e-12!248;CL:0000222!6.38e-12!119;CL:0000057!1.31e-11!75;CL:0000548!1.28e-07!679;CL:0000004!1.28e-07!679;CL:0000255!1.28e-07!679;CL:0000012!4.11e-07!682 | |||
|ontology_enrichment_celltype_v019=CL:0000359;3.99e-16;32!CL:0000192;1.65e-14;43!CL:0000134;3.45e-10;55!CL:0000048;5.57e-09;58!CL:0000723;6.54e-09;61!CL:0000187;1.36e-08;55!CL:0002539;4.23e-07;10!CL:0000393;6.88e-07;61!CL:0000211;6.88e-07;61!CL:0002334;7.64e-07;12!CL:0000034;9.36e-07;69 | |||
|ontology_enrichment_celltype_v019_2=CL:0000192,3.63e-20,43;CL:0000514,3.63e-20,43;CL:0000680,6.89e-18,58;CL:0000056,6.89e-18,58;CL:0000355,6.89e-18,58;CL:0000187,1.69e-17,55;CL:0000359,1.11e-16,32;CL:0000393,1.75e-14,61;CL:0000211,1.75e-14,61;CL:0000048,1.69e-10,427;CL:0000723,7.43e-10,433;CL:0000222,1.82e-09,121;CL:0000034,4.86e-09,441;CL:0002321,6.32e-09,250;CL:0000057,2.44e-07,76;CL:0002334,3.31e-07,12;CL:0002539,3.56e-07,10 | |||
|ontology_enrichment_development_v019=CL:0000514;1.65e-14;43!CL:0000355;1.26e-08;58 | |||
|ontology_enrichment_disease=DOID:2394!5.73e-07!14 | |||
|ontology_enrichment_disease_v019=DOID:2394;1.27e-10;14 | |||
|ontology_enrichment_disease_v019_2=DOID:2394,1.32e-10,14 | |||
|ontology_enrichment_uberon=UBERON:0000486!2.46e-18!82;UBERON:0001637!5.78e-18!42;UBERON:0003509!5.78e-18!42;UBERON:0004572!5.78e-18!42;UBERON:0000914!2.92e-16!83;UBERON:0002329!2.92e-16!83;UBERON:0003077!2.92e-16!83;UBERON:0003059!2.92e-16!83;UBERON:0007282!2.92e-16!83;UBERON:0009618!2.92e-16!83;UBERON:0007285!2.92e-16!83;UBERON:0004290!2.95e-16!70;UBERON:0004872!6.12e-16!84;UBERON:0001134!7.58e-15!61;UBERON:0002036!7.58e-15!61;UBERON:0003082!7.58e-15!61;UBERON:0001981!1.63e-14!60;UBERON:0007500!1.63e-14!60;UBERON:0004537!1.63e-14!60;UBERON:0006965!1.63e-14!60;UBERON:0002049!1.74e-14!79;UBERON:0007798!1.74e-14!79;UBERON:0004573!2.06e-14!33;UBERON:0004571!2.06e-14!33;UBERON:0002385!4.00e-14!63;UBERON:0001015!4.00e-14!63;UBERON:0000383!4.00e-14!63;UBERON:0000055!4.49e-13!69;UBERON:0000490!6.47e-11!138;UBERON:0004535!1.34e-10!110;UBERON:0005256!1.80e-10!143;UBERON:0001009!6.70e-10!113;UBERON:0003914!9.43e-10!118;UBERON:0002100!6.86e-09!216;UBERON:0003102!4.64e-08!95;UBERON:0000947!7.17e-08!21;UBERON:0010191!7.17e-08!21;UBERON:0000468!1.67e-07!659 | |||
|ontology_enrichment_uberon_v019=UBERON:0001637;1.34e-17;42!UBERON:0003509;1.34e-17;42!UBERON:0004572;1.34e-17;42!UBERON:0004573;7.49e-17;33!UBERON:0004571;7.49e-17;33!UBERON:0000947;9.72e-10;21!UBERON:0010191;9.72e-10;21!UBERON:0007500;8.87e-09;56!UBERON:0001981;8.87e-09;56!UBERON:0004537;8.87e-09;56!UBERON:0001013;3.32e-07;14!UBERON:0001135;3.68e-07;15!UBERON:0004237;4.23e-07;10!UBERON:0004695;4.23e-07;10!UBERON:0002111;4.23e-07;10!UBERON:0004178;4.23e-07;10 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001637,2.17e-23,42;UBERON:0003509,2.17e-23,42;UBERON:0004572,2.17e-23,42;UBERON:0004573,7.20e-19,33;UBERON:0004571,7.20e-19,33;UBERON:0000486,9.33e-19,83;UBERON:0007524,2.62e-18,73;UBERON:0002329,3.60e-18,71;UBERON:0003059,3.60e-18,71;UBERON:0007282,3.60e-18,71;UBERON:0004290,3.60e-18,71;UBERON:0009618,3.60e-18,71;UBERON:0003077,1.07e-17,72;UBERON:0007285,1.07e-17,72;UBERON:0007503,1.32e-17,78;UBERON:0001134,3.61e-17,62;UBERON:0002036,3.61e-17,62;UBERON:0003082,3.61e-17,62;UBERON:0002385,3.44e-16,64;UBERON:0001015,3.44e-16,64;UBERON:0000383,3.44e-16,64;UBERON:0004872,2.62e-15,83;UBERON:0007500,6.49e-15,59;UBERON:0001981,6.49e-15,59;UBERON:0004537,6.49e-15,59;UBERON:0006965,6.49e-15,59;UBERON:0000055,4.48e-12,68;UBERON:0002049,4.85e-12,78;UBERON:0007798,4.85e-12,78;UBERON:0000926,6.57e-12,315;UBERON:0004120,6.57e-12,315;UBERON:0006603,6.57e-12,315;UBERON:0004535,1.19e-10,109;UBERON:0005256,1.68e-10,122;UBERON:0000490,3.85e-10,148;UBERON:0003914,4.36e-10,117;UBERON:0000947,5.50e-10,21;UBERON:0010191,5.50e-10,21;UBERON:0001009,5.76e-10,112;UBERON:0002100,3.94e-08,199;UBERON:0003104,5.48e-08,160;UBERON:0009142,5.48e-08,160;UBERON:0001135,2.19e-07,15;UBERON:0004237,3.56e-07,10;UBERON:0004695,3.56e-07,10;UBERON:0002111,3.56e-07,10;UBERON:0004178,3.56e-07,10;UBERON:0001013,3.76e-07,14 | |||
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| ||
|short_description=p6@MMP14 | |||
}} | }} |
Latest revision as of 07:36, 19 September 2015
Short description: | p6@MMP14 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_6_at_MMP14_5end |
Coexpression cluster: | C2289_Smooth_Fibroblast_leiomyoma_Aortic_Preadipocyte_Osteoblast_mixed |
Association with transcript: | -61bp_to_ENST00000547596_5end |
EntrezGene: | MMP14 |
HGNC: | 7160 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
smooth muscle cell | 3.63e-20 | 43 |
smooth muscle myoblast | 3.63e-20 | 43 |
muscle precursor cell | 6.89e-18 | 58 |
myoblast | 6.89e-18 | 58 |
multi-potent skeletal muscle stem cell | 6.89e-18 | 58 |
muscle cell | 1.69e-17 | 55 |
vascular associated smooth muscle cell | 1.11e-16 | 32 |
electrically responsive cell | 1.75e-14 | 61 |
electrically active cell | 1.75e-14 | 61 |
multi fate stem cell | 1.69e-10 | 427 |
somatic stem cell | 7.43e-10 | 433 |
mesodermal cell | 1.82e-09 | 121 |
stem cell | 4.86e-09 | 441 |
embryonic cell | 6.32e-09 | 250 |
fibroblast | 2.44e-07 | 76 |
preadipocyte | 3.31e-07 | 12 |
aortic smooth muscle cell | 3.56e-07 | 10 |
Ontology term | p-value | n |
---|---|---|
ovarian cancer | 1.32e-10 | 14 |