FFCP PHASE1:Hg19::chr17:27309398..27309413,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=124925 | |EntrezGene=124925 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=novel_noncoding | |||
|HGNC=15955 | |HGNC=15955 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=-341bp_to_uc002hdm.2_5end | |association_with_transcript=-341bp_to_uc002hdm.2_5end | ||
|cluster_id=chr17:27309398..27309413,- | |||
|coexpression_cluster_id=C0 | |coexpression_cluster_id=C0 | ||
|description=CAGE_peak_3_at_SEZ6_5end | |description=CAGE_peak_3_at_SEZ6_5end | ||
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|ontology_enrichment_celltype=CL:0002057!1.02e-100!42;CL:0000860!3.08e-93!45;CL:0000766!2.34e-74!76;CL:0002194!3.71e-62!63;CL:0000576!3.71e-62!63;CL:0000040!3.71e-62!63;CL:0000559!3.71e-62!63;CL:0000839!1.18e-60!70;CL:0002009!6.29e-60!65;CL:0000557!1.19e-59!71;CL:0000738!2.10e-58!140;CL:0002087!4.59e-51!119;CL:0000763!1.11e-48!112;CL:0000049!1.11e-48!112;CL:0000037!1.20e-46!172;CL:0000566!1.20e-46!172;CL:0002031!3.61e-46!124;CL:0002032!1.25e-43!165;CL:0000837!1.25e-43!165;CL:0000988!2.76e-43!182;CL:0000134!1.25e-15!358;CL:0002320!4.76e-15!365;CL:0002393!1.05e-13!9;CL:0002397!1.05e-13!9;CL:0000219!5.27e-13!390;CL:0000094!1.64e-12!8;CL:0000034!8.10e-12!444;CL:0000048!3.05e-11!430;CL:0000723!6.93e-11!436;CL:0000081!6.95e-09!11;CL:0000767!7.74e-09!3;CL:0000842!1.56e-08!3;CL:0000624!4.33e-07!6 | |ontology_enrichment_celltype=CL:0002057!1.02e-100!42;CL:0000860!3.08e-93!45;CL:0000766!2.34e-74!76;CL:0002194!3.71e-62!63;CL:0000576!3.71e-62!63;CL:0000040!3.71e-62!63;CL:0000559!3.71e-62!63;CL:0000839!1.18e-60!70;CL:0002009!6.29e-60!65;CL:0000557!1.19e-59!71;CL:0000738!2.10e-58!140;CL:0002087!4.59e-51!119;CL:0000763!1.11e-48!112;CL:0000049!1.11e-48!112;CL:0000037!1.20e-46!172;CL:0000566!1.20e-46!172;CL:0002031!3.61e-46!124;CL:0002032!1.25e-43!165;CL:0000837!1.25e-43!165;CL:0000988!2.76e-43!182;CL:0000134!1.25e-15!358;CL:0002320!4.76e-15!365;CL:0002393!1.05e-13!9;CL:0002397!1.05e-13!9;CL:0000219!5.27e-13!390;CL:0000094!1.64e-12!8;CL:0000034!8.10e-12!444;CL:0000048!3.05e-11!430;CL:0000723!6.93e-11!436;CL:0000081!6.95e-09!11;CL:0000767!7.74e-09!3;CL:0000842!1.56e-08!3;CL:0000624!4.33e-07!6 | ||
|ontology_enrichment_celltype_v019=CL:0000860;1.20e-121;33!CL:0002057;1.20e-121;33!CL:0000473;6.42e-82;39!CL:0000234;6.42e-82;39!CL:0000576;7.43e-61;48!CL:0000766;7.81e-42;69!CL:0000763;3.59e-19;100!CL:0002087;2.19e-15;104!CL:0000738;3.69e-12;136!CL:0000094;5.57e-11;8!CL:0000775;3.68e-08;3!CL:0000081;5.24e-08;11!CL:0000988;8.70e-07;177 | |ontology_enrichment_celltype_v019=CL:0000860;1.20e-121;33!CL:0002057;1.20e-121;33!CL:0000473;6.42e-82;39!CL:0000234;6.42e-82;39!CL:0000576;7.43e-61;48!CL:0000766;7.81e-42;69!CL:0000763;3.59e-19;100!CL:0002087;2.19e-15;104!CL:0000738;3.69e-12;136!CL:0000094;5.57e-11;8!CL:0000775;3.68e-08;3!CL:0000081;5.24e-08;11!CL:0000988;8.70e-07;177 | ||
|ontology_enrichment_celltype_v019_2=CL:0000860,4.08e-116,42;CL:0002057,4.08e-116,42;CL:0000473,7.61e-101,48;CL:0000234,7.61e-101,48;CL:0000766,2.55e-83,72;CL:0002194,1.86e-79,59;CL:0000576,1.86e-79,59;CL:0000040,1.86e-79,59;CL:0000559,1.86e-79,59;CL:0002009,1.07e-76,61;CL:0000839,1.62e-70,66;CL:0000557,2.18e-69,67;CL:0000763,1.12e-53,108;CL:0000049,1.12e-53,108;CL:0000738,5.07e-44,136;CL:0002087,7.89e-41,115;CL:0002031,2.83e-36,120;CL:0000037,1.95e-34,168;CL:0002032,5.59e-34,161;CL:0000837,5.59e-34,161;CL:0000988,2.32e-32,177;CL:0000134,7.73e-13,354;CL:0002320,1.86e-12,361;CL:0000219,4.15e-11,386;CL:0000094,5.72e-11,8;CL:0000034,1.22e-10,441;CL:0000048,1.86e-09,427;CL:0000723,3.15e-09,433;CL:0000775,3.68e-08,3;CL:0000081,5.34e-08,11 | |||
|ontology_enrichment_development_v019=CL:0002057;1.51e-83;42!CL:0000049;1.87e-15;108 | |ontology_enrichment_development_v019=CL:0002057;1.51e-83;42!CL:0000049;1.87e-15;108 | ||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019= | |ontology_enrichment_disease_v019= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002371!1.03e-51!80;UBERON:0001474!2.45e-47!86;UBERON:0002390!7.61e-47!102;UBERON:0003061!7.61e-47!102;UBERON:0002193!7.31e-46!112;UBERON:0004765!1.17e-38!101;UBERON:0001434!1.17e-38!101;UBERON:0002405!3.09e-38!115;UBERON:0002204!5.25e-19!167;UBERON:0003081!8.94e-18!216;UBERON:0002384!5.17e-15!375 | |ontology_enrichment_uberon=UBERON:0002371!1.03e-51!80;UBERON:0001474!2.45e-47!86;UBERON:0002390!7.61e-47!102;UBERON:0003061!7.61e-47!102;UBERON:0002193!7.31e-46!112;UBERON:0004765!1.17e-38!101;UBERON:0001434!1.17e-38!101;UBERON:0002405!3.09e-38!115;UBERON:0002204!5.25e-19!167;UBERON:0003081!8.94e-18!216;UBERON:0002384!5.17e-15!375 | ||
|ontology_enrichment_uberon_v019= | |ontology_enrichment_uberon_v019= | ||
|ontology_enrichment_uberon_v019_2=UBERON:0002371,1.47e-60,76;UBERON:0001474,9.82e-56,82;UBERON:0004765,2.73e-50,90;UBERON:0002390,6.33e-49,98;UBERON:0003061,6.33e-49,98;UBERON:0002405,1.74e-48,93;UBERON:0001434,1.07e-44,100;UBERON:0002193,7.39e-44,108;UBERON:0002204,2.30e-24,167;UBERON:0003081,1.88e-20,203;UBERON:0002384,6.20e-12,371;UBERON:0000926,6.78e-11,315;UBERON:0004120,6.78e-11,315;UBERON:0006603,6.78e-11,315 | |||
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| ||
|short_description=p3@SEZ6 | |short_description=p3@SEZ6 | ||
}} | }} |
Latest revision as of 07:59, 19 September 2015
Short description: | p3@SEZ6 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_3_at_SEZ6_5end |
Coexpression cluster: | C0_CD14_Eosinophils_Neutrophils_Basophils_CD34_immature_Peripheral |
Association with transcript: | -341bp_to_uc002hdm.2_5end |
EntrezGene: | SEZ6 |
HGNC: | 15955 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
classical monocyte | 4.08e-116 | 42 |
CD14-positive, CD16-negative classical monocyte | 4.08e-116 | 42 |
defensive cell | 7.61e-101 | 48 |
phagocyte | 7.61e-101 | 48 |
myeloid leukocyte | 2.55e-83 | 72 |
monopoietic cell | 1.86e-79 | 59 |
monocyte | 1.86e-79 | 59 |
monoblast | 1.86e-79 | 59 |
promonocyte | 1.86e-79 | 59 |
macrophage dendritic cell progenitor | 1.07e-76 | 61 |
myeloid lineage restricted progenitor cell | 1.62e-70 | 66 |
granulocyte monocyte progenitor cell | 2.18e-69 | 67 |
myeloid cell | 1.12e-53 | 108 |
common myeloid progenitor | 1.12e-53 | 108 |
leukocyte | 5.07e-44 | 136 |
nongranular leukocyte | 7.89e-41 | 115 |
hematopoietic lineage restricted progenitor cell | 2.83e-36 | 120 |
hematopoietic stem cell | 1.95e-34 | 168 |
hematopoietic oligopotent progenitor cell | 5.59e-34 | 161 |
hematopoietic multipotent progenitor cell | 5.59e-34 | 161 |
hematopoietic cell | 2.32e-32 | 177 |
mesenchymal cell | 7.73e-13 | 354 |
connective tissue cell | 1.86e-12 | 361 |
motile cell | 4.15e-11 | 386 |
granulocyte | 5.72e-11 | 8 |
stem cell | 1.22e-10 | 441 |
multi fate stem cell | 1.86e-09 | 427 |
somatic stem cell | 3.15e-09 | 433 |
neutrophil | 3.68e-08 | 3 |
blood cell | 5.34e-08 | 11 |
Ontology term | p-value | n |
---|---|---|
bone marrow | 1.47e-60 | 76 |
bone element | 9.82e-56 | 82 |
skeletal element | 2.73e-50 | 90 |
hematopoietic system | 6.33e-49 | 98 |
blood island | 6.33e-49 | 98 |
immune system | 1.74e-48 | 93 |
skeletal system | 1.07e-44 | 100 |
hemolymphoid system | 7.39e-44 | 108 |
musculoskeletal system | 2.30e-24 | 167 |
lateral plate mesoderm | 1.88e-20 | 203 |
connective tissue | 6.20e-12 | 371 |
mesoderm | 6.78e-11 | 315 |
mesoderm-derived structure | 6.78e-11 | 315 |
presumptive mesoderm | 6.78e-11 | 315 |