FFCP PHASE1:Hg19::chr15:79501729..79501736,+: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
(5 intermediate revisions by the same user not shown) | |||
Line 1: | Line 1: | ||
{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=406960 | |EntrezGene=406960 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=31555 | |HGNC=31555 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=-393bp_to_NR_029705,uc010uni.1_5end | |association_with_transcript=-393bp_to_NR_029705,uc010uni.1_5end | ||
|cluster_id=chr15:79501729..79501736,+ | |||
|coexpression_cluster_id=C369 | |coexpression_cluster_id=C369 | ||
|description=CAGE_peak_1_at_MIR184_5end | |description=CAGE_peak_1_at_MIR184_5end | ||
Line 9: | Line 14: | ||
|ontology_enrichment_celltype=CL:0000064!1.35e-50!3;CL:0005012!1.35e-50!3;CL:0000067!1.35e-50!3;CL:0002304!1.35e-50!3;CL:0000342!5.26e-18!1;CL:0002565!5.26e-18!1;CL:0000075!1.63e-15!27;CL:0000710!1.22e-13!20;CL:0000147!3.36e-11!14;CL:0002077!2.21e-08!33;CL:0000325!4.22e-07!39;CL:0002586!9.12e-07!3 | |ontology_enrichment_celltype=CL:0000064!1.35e-50!3;CL:0005012!1.35e-50!3;CL:0000067!1.35e-50!3;CL:0002304!1.35e-50!3;CL:0000342!5.26e-18!1;CL:0002565!5.26e-18!1;CL:0000075!1.63e-15!27;CL:0000710!1.22e-13!20;CL:0000147!3.36e-11!14;CL:0002077!2.21e-08!33;CL:0000325!4.22e-07!39;CL:0002586!9.12e-07!3 | ||
|ontology_enrichment_celltype_v019=CL:0000064;4.68e-66;3!CL:0000067;4.68e-66;3!CL:0005012;4.68e-66;3!CL:0002304;4.68e-66;3!CL:0000075;2.21e-17;27!CL:0000306;8.81e-14;4!CL:0002222;8.81e-14;4!CL:0002224;8.81e-14;4!CL:0000710;6.00e-11;20!CL:0002077;3.69e-07;34 | |ontology_enrichment_celltype_v019=CL:0000064;4.68e-66;3!CL:0000067;4.68e-66;3!CL:0005012;4.68e-66;3!CL:0002304;4.68e-66;3!CL:0000075;2.21e-17;27!CL:0000306;8.81e-14;4!CL:0002222;8.81e-14;4!CL:0002224;8.81e-14;4!CL:0000710;6.00e-11;20!CL:0002077;3.69e-07;34 | ||
|ontology_enrichment_celltype_v019_2=CL:0000064,3.35e-66,3;CL:0000067,3.35e-66,3;CL:0005012,3.35e-66,3;CL:0002304,3.35e-66,3;CL:0000075,2.09e-17,27;CL:0000306,8.82e-14,4;CL:0002222,8.82e-14,4;CL:0002224,8.82e-14,4;CL:0000710,5.70e-11,20;CL:0002077,7.16e-07,34 | |||
|ontology_enrichment_development_v019= | |ontology_enrichment_development_v019= | ||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019= | |ontology_enrichment_disease_v019= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000488!9.57e-67!4;UBERON:0007625!3.81e-54!11;UBERON:0001778!1.35e-50!3;UBERON:0001775!1.35e-50!3;UBERON:0002203!1.04e-44!6;UBERON:0001768!1.04e-44!6;UBERON:0000970!2.30e-40!20;UBERON:0002104!1.95e-38!21;UBERON:0000020!4.44e-35!23;UBERON:0001032!1.31e-33!24;UBERON:0004456!1.31e-33!24;UBERON:0000019!2.26e-31!19;UBERON:0000047!2.26e-31!19;UBERON:0004088!2.26e-31!19;UBERON:0003072!2.26e-31!19;UBERON:0003071!2.26e-31!19;UBERON:0004128!2.26e-31!19;UBERON:0001801!6.31e-30!14;UBERON:0001456!2.19e-28!21;UBERON:0002200!1.26e-24!11;UBERON:0006876!1.26e-24!11;UBERON:0005085!1.53e-20!29;UBERON:0002506!5.26e-18!1;UBERON:0001769!5.26e-18!1;UBERON:0003056!8.53e-13!61;UBERON:0001444!2.34e-12!48;UBERON:0001905!1.44e-09!2;UBERON:0002757!1.44e-09!2;UBERON:0010134!1.44e-09!2;UBERON:0002784!1.44e-09!2;UBERON:0005408!1.44e-09!2;UBERON:0001899!1.44e-09!2;UBERON:0003075!5.35e-09!86;UBERON:0007284!5.35e-09!86;UBERON:0002346!1.39e-08!90;UBERON:0000063!5.17e-08!97;UBERON:0001781!9.12e-07!3;UBERON:0001782!9.12e-07!3;UBERON:0005424!9.12e-07!3 | |ontology_enrichment_uberon=UBERON:0000488!9.57e-67!4;UBERON:0007625!3.81e-54!11;UBERON:0001778!1.35e-50!3;UBERON:0001775!1.35e-50!3;UBERON:0002203!1.04e-44!6;UBERON:0001768!1.04e-44!6;UBERON:0000970!2.30e-40!20;UBERON:0002104!1.95e-38!21;UBERON:0000020!4.44e-35!23;UBERON:0001032!1.31e-33!24;UBERON:0004456!1.31e-33!24;UBERON:0000019!2.26e-31!19;UBERON:0000047!2.26e-31!19;UBERON:0004088!2.26e-31!19;UBERON:0003072!2.26e-31!19;UBERON:0003071!2.26e-31!19;UBERON:0004128!2.26e-31!19;UBERON:0001801!6.31e-30!14;UBERON:0001456!2.19e-28!21;UBERON:0002200!1.26e-24!11;UBERON:0006876!1.26e-24!11;UBERON:0005085!1.53e-20!29;UBERON:0002506!5.26e-18!1;UBERON:0001769!5.26e-18!1;UBERON:0003056!8.53e-13!61;UBERON:0001444!2.34e-12!48;UBERON:0001905!1.44e-09!2;UBERON:0002757!1.44e-09!2;UBERON:0010134!1.44e-09!2;UBERON:0002784!1.44e-09!2;UBERON:0005408!1.44e-09!2;UBERON:0001899!1.44e-09!2;UBERON:0003075!5.35e-09!86;UBERON:0007284!5.35e-09!86;UBERON:0002346!1.39e-08!90;UBERON:0000063!5.17e-08!97;UBERON:0001781!9.12e-07!3;UBERON:0001782!9.12e-07!3;UBERON:0005424!9.12e-07!3 | ||
|ontology_enrichment_uberon_v019=UBERON:0001778;4.68e-66;3!UBERON:0001775;4.68e-66;3!UBERON:0000488;6.60e-50;4!UBERON:0007625;4.67e-41;11!UBERON:0000970;4.28e-40;20!UBERON:0002104;3.06e-38;21!UBERON:0000020;5.16e-35;23!UBERON:0002203;9.87e-34;6!UBERON:0001768;9.87e-34;6!UBERON:0002200;9.87e-34;6!UBERON:0001032;1.33e-33;24!UBERON:0004456;1.33e-33;24!UBERON:0001801;1.63e-32;14!UBERON:0000019;2.96e-24;19!UBERON:0000047;2.96e-24;19!UBERON:0004088;2.96e-24;19!UBERON:0010230;2.96e-24;19!UBERON:0001456;4.76e-22;21!UBERON:0006876;5.63e-19;11!UBERON:0010371;9.59e-16;31!UBERON:0010077;8.81e-14;4!UBERON:0005389;8.81e-14;4!UBERON:0000484;8.81e-14;4!UBERON:0000965;8.81e-14;4!UBERON:0001803;8.81e-14;4!UBERON:0001444;8.65e-09;48!UBERON:0000033;1.42e-08;50 | |ontology_enrichment_uberon_v019=UBERON:0001778;4.68e-66;3!UBERON:0001775;4.68e-66;3!UBERON:0000488;6.60e-50;4!UBERON:0007625;4.67e-41;11!UBERON:0000970;4.28e-40;20!UBERON:0002104;3.06e-38;21!UBERON:0000020;5.16e-35;23!UBERON:0002203;9.87e-34;6!UBERON:0001768;9.87e-34;6!UBERON:0002200;9.87e-34;6!UBERON:0001032;1.33e-33;24!UBERON:0004456;1.33e-33;24!UBERON:0001801;1.63e-32;14!UBERON:0000019;2.96e-24;19!UBERON:0000047;2.96e-24;19!UBERON:0004088;2.96e-24;19!UBERON:0010230;2.96e-24;19!UBERON:0001456;4.76e-22;21!UBERON:0006876;5.63e-19;11!UBERON:0010371;9.59e-16;31!UBERON:0010077;8.81e-14;4!UBERON:0005389;8.81e-14;4!UBERON:0000484;8.81e-14;4!UBERON:0000965;8.81e-14;4!UBERON:0001803;8.81e-14;4!UBERON:0001444;8.65e-09;48!UBERON:0000033;1.42e-08;50 | ||
|ontology_enrichment_uberon_v019_2=UBERON:0001778,3.35e-66,3;UBERON:0001775,3.35e-66,3;UBERON:0000488,5.14e-50,4;UBERON:0007625,4.07e-41,11;UBERON:0000970,3.06e-38,21;UBERON:0002104,3.06e-38,21;UBERON:0002203,8.35e-34,6;UBERON:0001768,8.35e-34,6;UBERON:0002200,8.35e-34,6;UBERON:0000020,1.33e-33,24;UBERON:0001032,1.33e-33,24;UBERON:0004456,1.33e-33,24;UBERON:0001801,1.46e-32,14;UBERON:0000019,3.95e-23,20;UBERON:0000047,3.95e-23,20;UBERON:0010312,3.95e-23,20;UBERON:0004088,3.95e-23,20;UBERON:0010230,3.95e-23,20;UBERON:0003072,3.95e-23,20;UBERON:0004128,3.95e-23,20;UBERON:0003071,3.95e-23,20;UBERON:0001456,3.99e-21,22;UBERON:0006876,5.14e-19,11;UBERON:0005085,2.73e-15,31;UBERON:0010077,8.82e-14,4;UBERON:0005389,8.82e-14,4;UBERON:0000484,8.82e-14,4;UBERON:0002546,8.82e-14,4;UBERON:0000965,8.82e-14,4;UBERON:0001803,8.82e-14,4;UBERON:0003073,8.82e-14,4;UBERON:0005426,8.82e-14,4;UBERON:0001444,5.14e-10,49;UBERON:0000033,7.15e-09,56;UBERON:0000153,4.28e-08,62;UBERON:0007811,4.28e-08,62;UBERON:0003056,4.28e-08,61;UBERON:0000076,1.49e-07,8 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.41802225746102,0.665188192387692,1.49319135678314,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.10366105501537,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.857839051492628,0,0,0,0,0,0,0,5.56465943880369,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.325378394664303,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0730893170861856,0,0,0,1.35588444468319,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.336283722218824,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.109940516745429,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.534434810531121,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0 | |phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.41802225746102,0.665188192387692,1.49319135678314,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.10366105501537,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.857839051492628,0,0,0,0,0,0,0,5.56465943880369,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.325378394664303,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0730893170861856,0,0,0,1.35588444468319,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.336283722218824,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.109940516745429,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.534434810531121,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0 | ||
|short_description=p1@MIR184 | |short_description=p1@MIR184 | ||
}} | }} |
Latest revision as of 08:13, 19 September 2015
Short description: | p1@MIR184 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_MIR184_5end |
Coexpression cluster: | C369_Lens_eye_Ciliary_retina_H9_Retinal_Renal |
Association with transcript: | -393bp_to_NR_029705, uc010uni.1_5end |
EntrezGene: | MIR184 |
HGNC: | 31555 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
ciliated cell | 3.35e-66 | 3 |
ciliated epithelial cell | 3.35e-66 | 3 |
multi-ciliated epithelial cell | 3.35e-66 | 3 |
non-pigmented ciliary epithelial cell | 3.35e-66 | 3 |
columnar/cuboidal epithelial cell | 2.09e-17 | 27 |
crystallin accumulating cell | 8.82e-14 | 4 |
vertebrate lens cell | 8.82e-14 | 4 |
lens epithelial cell | 8.82e-14 | 4 |
neurecto-epithelial cell | 5.70e-11 | 20 |
ecto-epithelial cell | 7.16e-07 | 34 |