FFCP PHASE1:Hg19::chr11:65326732..65326748,-: Difference between revisions
From FANTOM5_SSTAR
m (moved FFCP PHASE1 hg19::chr11:65326732..65326748,- to FFCP PHASE1:Hg19::chr11:65326732..65326748,-: NSchange) |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=4054 | |EntrezGene=4054 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=6716 | |HGNC=6716 | ||
|TSSclassifier=strong | |||
|UniProt=E9PKW1 | |UniProt=E9PKW1 | ||
|association_with_transcript=-331bp_to_ENST00000530866_5end | |||
|cluster_id=chr11:65326732..65326748,- | |||
|description=CAGE_peak_38_at_LTBP3_5end | |||
|id=chr11:65326732..65326748,- | |||
|ontology_enrichment_celltype=CL:0000133!6.22e-11!59;CL:0000306!1.34e-10!4;CL:0002222!1.34e-10!4;CL:0002224!1.34e-10!4;CL:0000064!9.78e-09!3;CL:0005012!9.78e-09!3;CL:0000067!9.78e-09!3;CL:0002304!9.78e-09!3;CL:0002319!1.28e-08!25;CL:0000128!1.70e-08!7;CL:0000126!1.70e-08!7;CL:0000127!1.70e-08!7;CL:0002453!1.70e-08!7;CL:0000221!2.62e-08!71;CL:0000708!2.78e-08!3;CL:0000243!6.88e-08!15;CL:0000125!6.88e-08!15;CL:0000030!6.88e-08!15;CL:0000339!6.88e-08!15;CL:0002605!7.12e-08!3;CL:0000095!6.60e-07!17;CL:0000123!6.60e-07!17 | |||
|ontology_enrichment_celltype_v019=CL:0000306;4.62e-22;4!CL:0002222;4.62e-22;4!CL:0002224;4.62e-22;4!CL:0000064;1.41e-13;3!CL:0000067;1.41e-13;3!CL:0005012;1.41e-13;3!CL:0002304;1.41e-13;3!CL:0000346;2.19e-13;3!CL:1000428;2.19e-13;3!CL:0000342;5.84e-11;1!CL:0002565;5.84e-11;1!CL:0000075;1.07e-08;27!CL:0002559;2.16e-08;5 | |||
|ontology_enrichment_celltype_v019_2=CL:0000306,4.63e-22,4;CL:0002222,4.63e-22,4;CL:0002224,4.63e-22,4;CL:0000064,1.16e-13,3;CL:0000067,1.16e-13,3;CL:0005012,1.16e-13,3;CL:0002304,1.16e-13,3;CL:0000346,1.41e-13,3;CL:1000428,1.41e-13,3;CL:0000342,5.57e-11,1;CL:0002565,5.57e-11,1;CL:0000075,1.02e-08,27;CL:0002559,1.66e-08,5 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019=DOID:0060085;4.15e-11;1!DOID:3165;4.15e-11;1!DOID:0060121;4.15e-11;1!DOID:2438;4.15e-11;1!DOID:4418;4.15e-11;1!DOID:3347;5.84e-11;1!DOID:6193;1.15e-10;1!DOID:201;2.26e-07;6!DOID:0060100;2.26e-07;6 | |||
|ontology_enrichment_disease_v019_2=DOID:0060085,4.15e-11,1;DOID:3165,4.15e-11,1;DOID:0060121,4.15e-11,1;DOID:2438,4.15e-11,1;DOID:4418,4.15e-11,1;DOID:3347,6.77e-11,1;DOID:6193,1.10e-10,1;DOID:201,2.37e-07,6;DOID:0060100,2.37e-07,6 | |||
|ontology_enrichment_uberon=UBERON:0007625!3.97e-14!11;UBERON:0000488!3.59e-11!4;UBERON:0001801!9.55e-11!14;UBERON:0010077!1.34e-10!4;UBERON:0005389!1.34e-10!4;UBERON:0000484!1.34e-10!4;UBERON:0002546!1.34e-10!4;UBERON:0000965!1.34e-10!4;UBERON:0001803!1.34e-10!4;UBERON:0003073!1.34e-10!4;UBERON:0005426!1.34e-10!4;UBERON:0000019!2.51e-09!19;UBERON:0000047!2.51e-09!19;UBERON:0004088!2.51e-09!19;UBERON:0003072!2.51e-09!19;UBERON:0003071!2.51e-09!19;UBERON:0004128!2.51e-09!19;UBERON:0001264!4.34e-09!10;UBERON:0003922!4.34e-09!10;UBERON:0003923!4.34e-09!10;UBERON:0003924!4.34e-09!10;UBERON:0003921!4.34e-09!10;UBERON:0000020!4.38e-09!23;UBERON:0000924!7.95e-09!173;UBERON:0006601!7.95e-09!173;UBERON:0000970!9.14e-09!20;UBERON:0001778!9.78e-09!3;UBERON:0001775!9.78e-09!3;UBERON:0002346!1.21e-08!90;UBERON:0001032!1.29e-08!24;UBERON:0004456!1.29e-08!24;UBERON:0005085!1.94e-08!29;UBERON:0003210!2.78e-08!3;UBERON:0002104!2.94e-08!21;UBERON:0001456!2.94e-08!21;UBERON:0001045!3.52e-08!11;UBERON:0002200!7.30e-08!11;UBERON:0006876!7.30e-08!11;UBERON:0004121!7.76e-08!169;UBERON:0000033!1.56e-07!123;UBERON:0003075!1.82e-07!86;UBERON:0007284!1.82e-07!86;UBERON:0002203!2.12e-07!6;UBERON:0001768!2.12e-07!6;UBERON:0000153!6.82e-07!129;UBERON:0007811!6.82e-07!129;UBERON:0001017!8.50e-07!82;UBERON:0002114!8.75e-07!12 | |||
|ontology_enrichment_uberon_v019=UBERON:0007625;1.16e-30;11!UBERON:0001801;4.98e-24;14!UBERON:0010077;4.62e-22;4!UBERON:0005389;4.62e-22;4!UBERON:0000484;4.62e-22;4!UBERON:0000965;4.62e-22;4!UBERON:0001803;4.62e-22;4!UBERON:0000488;5.94e-22;4!UBERON:0010371;7.35e-18;31!UBERON:0000019;1.29e-17;19!UBERON:0000047;1.29e-17;19!UBERON:0004088;1.29e-17;19!UBERON:0010230;1.29e-17;19!UBERON:0000970;1.02e-16;20!UBERON:0001264;4.71e-16;10!UBERON:0002104;6.64e-16;21!UBERON:0001456;6.64e-16;21!UBERON:0002203;7.57e-15;6!UBERON:0001768;7.57e-15;6!UBERON:0002200;7.57e-15;6!UBERON:0000020;1.73e-14;23!UBERON:0001032;7.22e-14;24!UBERON:0004456;7.22e-14;24!UBERON:0001778;1.41e-13;3!UBERON:0001775;1.41e-13;3!UBERON:0000412;2.19e-13;3!UBERON:0001992;2.19e-13;3!UBERON:0002506;5.84e-11;1!UBERON:0001769;5.84e-11;1!UBERON:0002075;5.34e-09;18!UBERON:0002073;2.16e-08;5!UBERON:0006876;2.42e-08;11 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0007625,9.71e-31,11;UBERON:0001801,4.33e-24,14;UBERON:0010077,4.63e-22,4;UBERON:0005389,4.63e-22,4;UBERON:0000488,4.63e-22,4;UBERON:0000484,4.63e-22,4;UBERON:0002546,4.63e-22,4;UBERON:0000965,4.63e-22,4;UBERON:0001803,4.63e-22,4;UBERON:0003073,4.63e-22,4;UBERON:0005426,4.63e-22,4;UBERON:0005085,1.20e-18,31;UBERON:0000019,9.26e-17,20;UBERON:0000047,9.26e-17,20;UBERON:0010312,9.26e-17,20;UBERON:0004088,9.26e-17,20;UBERON:0010230,9.26e-17,20;UBERON:0003072,9.26e-17,20;UBERON:0004128,9.26e-17,20;UBERON:0003071,9.26e-17,20;UBERON:0001264,4.71e-16,10;UBERON:0000970,6.06e-16,21;UBERON:0002104,6.06e-16,21;UBERON:0001456,3.34e-15,22;UBERON:0002203,6.41e-15,6;UBERON:0001768,6.41e-15,6;UBERON:0002200,6.41e-15,6;UBERON:0000020,6.66e-14,24;UBERON:0001032,6.66e-14,24;UBERON:0004456,6.66e-14,24;UBERON:0001778,1.16e-13,3;UBERON:0001775,1.16e-13,3;UBERON:0000412,1.41e-13,3;UBERON:0001992,1.41e-13,3;UBERON:0000076,2.48e-11,8;UBERON:0002506,5.57e-11,1;UBERON:0001769,5.57e-11,1;UBERON:0002075,5.34e-09,18;UBERON:0002073,1.66e-08,5;UBERON:0005086,1.66e-08,5;UBERON:0006876,2.22e-08,11 | |||
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| ||
|short_description=p38@LTBP3 | |||
}} | }} |
Latest revision as of 09:54, 19 September 2015
Short description: | p38@LTBP3 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_38_at_LTBP3_5end |
Coexpression cluster: | NA |
Association with transcript: | -331bp_to_ENST00000530866_5end |
EntrezGene: | LTBP3 |
HGNC: | 6716 |
UniProt: | E9PKW1 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
crystallin accumulating cell | 4.63e-22 | 4 |
vertebrate lens cell | 4.63e-22 | 4 |
lens epithelial cell | 4.63e-22 | 4 |
ciliated cell | 1.16e-13 | 3 |
ciliated epithelial cell | 1.16e-13 | 3 |
multi-ciliated epithelial cell | 1.16e-13 | 3 |
non-pigmented ciliary epithelial cell | 1.16e-13 | 3 |
hair follicle dermal papilla cell | 1.41e-13 | 3 |
stem cell of epidermis | 1.41e-13 | 3 |
pigment cell (sensu Vertebrata) | 5.57e-11 | 1 |
iris pigment epithelial cell | 5.57e-11 | 1 |
columnar/cuboidal epithelial cell | 1.02e-08 | 27 |
hair follicle cell | 1.66e-08 | 5 |
Ontology term | p-value | n |
---|---|---|
organ system benign neoplasm | 4.15e-11 | 1 |
skin benign neoplasm | 4.15e-11 | 1 |
integumentary system benign neoplasm | 4.15e-11 | 1 |
dermis tumor | 4.15e-11 | 1 |
cutaneous fibrous histiocytoma | 4.15e-11 | 1 |
osteosarcoma | 6.77e-11 | 1 |
epithelioid sarcoma | 1.10e-10 | 1 |
connective tissue cancer | 2.37e-07 | 6 |
musculoskeletal system cancer | 2.37e-07 | 6 |