FFCP PHASE1:Hg19::chr19:50666431..50666455,-: Difference between revisions
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=126123 | |EntrezGene=126123 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=28518 | |HGNC=28518 | ||
|TSSclassifier=strong | |||
|UniProt=Q6UXV1 | |UniProt=Q6UXV1 | ||
|association_with_transcript=0bp_to_ENST00000293405,ENST00000486050_5end | |||
|cluster_id=chr19:50666431..50666455,- | |||
|coexpression_cluster_id=C1 | |||
|description=CAGE_peak_1_at_IZUMO2_5end | |||
|id=chr19:50666431..50666455,- | |||
|ontology_enrichment_celltype=CL:0002322!1.61e-19!5;CL:0000540!3.08e-10!6;CL:0000031!3.08e-10!6;CL:0000404!3.08e-10!6;CL:0000039!9.50e-09!7;CL:0000586!9.50e-09!7;CL:0002536!3.01e-08!2;CL:0000047!1.12e-07!8 | |||
|ontology_enrichment_celltype_v019=CL:0002322;7.94e-40;5!CL:0002321;8.20e-14;15!CL:0000039;1.40e-13;7!CL:0000586;1.40e-13;7 | |||
|ontology_enrichment_celltype_v019_2=CL:0002322,9.70e-40,5;CL:0000039,1.31e-13,7;CL:0000586,1.31e-13,7 | |||
|ontology_enrichment_development_v019=UBERON:0009117;9.99e-36;10!UBERON:0005564;9.99e-36;10 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0001869!1.09e-26!32;UBERON:0001049!5.00e-26!57;UBERON:0005068!5.00e-26!57;UBERON:0006241!5.00e-26!57;UBERON:0007135!5.00e-26!57;UBERON:0001017!5.49e-26!82;UBERON:0002616!5.77e-25!59;UBERON:0001893!6.36e-25!34;UBERON:0002020!8.39e-25!34;UBERON:0003528!8.39e-25!34;UBERON:0005743!1.75e-24!86;UBERON:0000956!2.20e-23!25;UBERON:0000203!2.20e-23!25;UBERON:0002619!6.07e-23!22;UBERON:0002791!1.33e-22!33;UBERON:0000955!2.17e-22!69;UBERON:0006238!2.17e-22!69;UBERON:0001950!1.35e-21!20;UBERON:0000073!1.48e-21!94;UBERON:0001016!1.48e-21!94;UBERON:0002780!4.52e-20!41;UBERON:0001890!4.52e-20!41;UBERON:0006240!4.52e-20!41;UBERON:0003080!1.65e-19!42;UBERON:0000473!8.62e-17!8;UBERON:0003075!1.93e-15!86;UBERON:0007284!1.93e-15!86;UBERON:0000200!1.20e-14!6;UBERON:0002346!1.62e-14!90;UBERON:0003056!2.76e-12!61;UBERON:0004121!3.78e-12!169;UBERON:0003135!5.19e-12!11;UBERON:0001872!9.26e-12!5;UBERON:0000924!1.05e-11!173;UBERON:0006601!1.05e-11!173;UBERON:0007023!1.41e-11!115;UBERON:0002771!2.71e-11!3;UBERON:0000033!3.34e-10!123;UBERON:0004733!9.12e-10!12;UBERON:0002028!9.12e-10!12;UBERON:0007277!9.12e-10!12;UBERON:0002680!1.70e-09!9;UBERON:0001895!1.70e-09!9;UBERON:0010092!1.70e-09!9;UBERON:0000153!1.75e-09!129;UBERON:0007811!1.75e-09!129;UBERON:0004732!5.75e-09!13;UBERON:0000064!1.64e-08!219;UBERON:0003076!1.09e-07!15;UBERON:0003057!1.09e-07!15;UBERON:0000025!3.20e-07!194;UBERON:0001871!3.30e-07!7 | |||
|ontology_enrichment_uberon_v019=UBERON:0000473;1.72e-44;8!UBERON:0003135;1.55e-32;11!UBERON:0000991;2.64e-17;21!UBERON:0003101;1.54e-16;22!UBERON:0000079;1.54e-16;22!UBERON:0000922;6.30e-09;49!UBERON:0002323;4.96e-07;45 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000473,1.63e-44,8;UBERON:0003135,1.49e-32,11;UBERON:0000991,2.59e-17,21;UBERON:0009196,2.59e-17,21;UBERON:0009117,2.59e-17,21;UBERON:0005564,2.59e-17,21;UBERON:0004176,1.51e-16,22;UBERON:0003101,1.51e-16,22;UBERON:0000079,1.51e-16,22;UBERON:0002323,4.05e-08,46;UBERON:0003133,8.57e-08,48;UBERON:0004458,1.22e-07,49;UBERON:0003886,5.83e-07,54 | |||
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| ||
|short_description=p1@IZUMO2 | |||
}} | }} |
Latest revision as of 10:33, 19 September 2015
Short description: | p1@IZUMO2 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_IZUMO2_5end |
Coexpression cluster: | C1_testis_epididymis_embryonic_medulla_pituitary_trachea_caudate |
Association with transcript: | 0bp_to_ENST00000293405, ENST00000486050_5end |
EntrezGene: | IZUMO2 |
HGNC: | 28518 |
UniProt: | Q6UXV1 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
embryonic stem cell | 9.70e-40 | 5 |
germ line cell | 1.31e-13 | 7 |
germ cell | 1.31e-13 | 7 |
Ontology term | p-value | n |
---|---|---|
testis | 1.63e-44 | 8 |
male reproductive organ | 1.49e-32 | 11 |
gonad | 2.59e-17 | 21 |
indifferent external genitalia | 2.59e-17 | 21 |
indifferent gonad | 2.59e-17 | 21 |
gonad primordium | 2.59e-17 | 21 |
external genitalia | 1.51e-16 | 22 |
male organism | 1.51e-16 | 22 |
male reproductive system | 1.51e-16 | 22 |
body cavity | 4.05e-08 | 46 |
reproductive organ | 8.57e-08 | 48 |
body cavity or lining | 1.22e-07 | 49 |
body cavity precursor | 5.83e-07 | 54 |