FFCP PHASE1:Hg19::chr12:56881377..56881388,-: Difference between revisions
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=27165 | |EntrezGene=27165 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=29570 | |HGNC=29570 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=0bp_to_ENST00000491880_5end | |||
|cluster_id=chr12:56881377..56881388,- | |||
|coexpression_cluster_id=C5 | |||
|description=CAGE_peak_12_at_GLS2_5end | |||
|id=chr12:56881377..56881388,- | |||
|ontology_enrichment_celltype=CL:0002553!2.40e-09!1 | |||
|ontology_enrichment_celltype_v019= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_development_v019=UBERON:0005425;3.30e-40;1!UBERON:0003056;2.09e-14;3 | |||
|ontology_enrichment_disease=DOID:5409!1.12e-08!4 | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000007!1.08e-16!2;UBERON:0004732!1.08e-09!13;UBERON:0000941!2.22e-09!1;UBERON:0004904!2.22e-09!1;UBERON:0002464!2.22e-09!1;UBERON:0001021!2.22e-09!1;UBERON:0001785!2.22e-09!1;UBERON:0000073!3.16e-09!94;UBERON:0001016!3.16e-09!94;UBERON:0000955!4.16e-09!69;UBERON:0006238!4.16e-09!69;UBERON:0003296!8.51e-09!4;UBERON:0010133!8.51e-09!4;UBERON:0002022!1.16e-08!1;UBERON:0005743!1.35e-08!86;UBERON:0002680!3.64e-08!9;UBERON:0001895!3.64e-08!9;UBERON:0010092!3.64e-08!9;UBERON:0007023!1.69e-07!115;UBERON:0001017!1.87e-07!82;UBERON:0001049!2.63e-07!57;UBERON:0005068!2.63e-07!57;UBERON:0006241!2.63e-07!57;UBERON:0007135!2.63e-07!57;UBERON:0003075!4.05e-07!86;UBERON:0007284!4.05e-07!86;UBERON:0000966!4.85e-07!5;UBERON:0005388!4.85e-07!5;UBERON:0001802!4.85e-07!5;UBERON:0002616!4.99e-07!59;UBERON:0002346!9.74e-07!90 | |||
|ontology_enrichment_uberon_v019=UBERON:0000941;3.30e-40;1!UBERON:0001785;3.30e-40;1!UBERON:0002464;3.30e-40;1!UBERON:0004904;3.30e-40;1!UBERON:0001021;3.30e-40;1!UBERON:0003714;6.96e-21;2!UBERON:0005162;6.96e-21;2!UBERON:0000122;6.96e-21;2!UBERON:0002107;1.99e-09;19!UBERON:0006925;1.99e-09;19!UBERON:0002423;2.13e-07;25 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000941,3.30e-40,1;UBERON:0001785,3.30e-40,1;UBERON:0002464,3.30e-40,1;UBERON:0004904,3.30e-40,1;UBERON:0001021,3.30e-40,1;UBERON:0003902,3.30e-40,1;UBERON:0005425,3.30e-40,1;UBERON:0003714,6.96e-21,2;UBERON:0005162,6.96e-21,2;UBERON:0000122,6.96e-21,2;UBERON:0001781,3.79e-11,4;UBERON:0002107,1.99e-09,19;UBERON:0006925,1.99e-09,19;UBERON:0008836,1.99e-09,19;UBERON:0008835,2.82e-08,22;UBERON:0003894,2.82e-08,22;UBERON:0009854,5.87e-08,23;UBERON:0000966,7.25e-08,6;UBERON:0005388,7.25e-08,6;UBERON:0001802,7.25e-08,6;UBERON:0007499,2.14e-07,25;UBERON:0009497,2.14e-07,25;UBERON:0000015,2.14e-07,25;UBERON:0002423,2.14e-07,25;UBERON:0006235,2.14e-07,25;UBERON:0004161,2.14e-07,25;UBERON:0009856,3.78e-07,26 | |||
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|short_description=p12@GLS2 | |||
}} | }} |
Latest revision as of 11:07, 19 September 2015
Short description: | p12@GLS2 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_12_at_GLS2_5end |
Coexpression cluster: | C5_Hepatocyte_liver_hepatocellular_Intestinal_kidney_small_pancreas |
Association with transcript: | 0bp_to_ENST00000491880_5end |
EntrezGene: | GLS2 |
HGNC: | 29570 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
cranial nerve II | 3.30e-40 | 1 |
cranial nerve | 3.30e-40 | 1 |
nerve trunk | 3.30e-40 | 1 |
nerve connecting eye with brain | 3.30e-40 | 1 |
nerve | 3.30e-40 | 1 |
retinal neural layer | 3.30e-40 | 1 |
presumptive neural retina | 3.30e-40 | 1 |
neural tissue | 6.96e-21 | 2 |
multi cell component structure | 6.96e-21 | 2 |
neuron projection bundle | 6.96e-21 | 2 |
layer of retina | 3.79e-11 | 4 |
liver | 1.99e-09 | 19 |
digestive gland | 1.99e-09 | 19 |
liver bud | 1.99e-09 | 19 |
hepatic diverticulum | 2.82e-08 | 22 |
liver primordium | 2.82e-08 | 22 |
digestive tract diverticulum | 5.87e-08 | 23 |
retina | 7.25e-08 | 6 |
photoreceptor array | 7.25e-08 | 6 |
posterior segment of eyeball | 7.25e-08 | 6 |
epithelial sac | 2.14e-07 | 25 |
epithelium of foregut-midgut junction | 2.14e-07 | 25 |
anatomical boundary | 2.14e-07 | 25 |
hepatobiliary system | 2.14e-07 | 25 |
foregut-midgut junction | 2.14e-07 | 25 |
septum transversum | 2.14e-07 | 25 |
sac | 3.78e-07 | 26 |