FFCP PHASE1:Hg19::chrX:133507327..133507386,+: Difference between revisions
From FANTOM5_SSTAR
m (moved FFCP PHASE1 hg19::chrX:133507327..133507386,+ to FFCP PHASE1:Hg19::chrX:133507327..133507386,+: NSchange) |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=84295 | |EntrezGene=84295 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=18145 | |HGNC=18145 | ||
|TSSclassifier=strong | |||
|UniProt=Q8IWS0,Q5JRC6,E9PC97,B4E0G4,A8K230 | |UniProt=Q8IWS0,Q5JRC6,E9PC97,B4E0G4,A8K230 | ||
|association_with_transcript=0bp_to_ENST00000332070,ENST00000370799,ENST00000394292,ENST00000416404,NM_001015877,NM_032335,NM_032458,uc004exh.2,uc004exi.2,uc004exj.2,uc004exk.2,uc010nrr.2,uc011mvk.1_5end | |||
|cluster_id=chrX:133507327..133507386,+ | |||
|coexpression_cluster_id=C17 | |||
|description=CAGE_peak_1_at_PHF6_5end | |||
|id=chrX:133507327..133507386,+ | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease=DOID:162!5.15e-34!235;DOID:14566!1.58e-33!239;DOID:0050687!3.54e-23!143;DOID:305!4.05e-18!106;DOID:0050686!7.57e-17!137;DOID:2531!2.39e-09!51;DOID:0060083!2.39e-09!51;DOID:1240!1.03e-08!39;DOID:8692!8.42e-08!31 | |||
|ontology_enrichment_disease_v019=DOID:8692;1.14e-07;31!DOID:1240;1.65e-07;39 | |||
|ontology_enrichment_disease_v019_2=DOID:162,5.15e-34,235;DOID:14566,1.58e-33,239;DOID:0050687,3.54e-23,143;DOID:305,4.05e-18,106;DOID:0050686,7.57e-17,137;DOID:2531,2.39e-09,51;DOID:0060083,2.39e-09,51;DOID:1240,1.03e-08,39;DOID:8692,8.42e-08,31 | |||
|ontology_enrichment_uberon=UBERON:0000073!1.05e-10!94;UBERON:0001016!1.05e-10!94;UBERON:0001017!3.61e-10!82;UBERON:0005743!5.54e-10!86;UBERON:0000924!2.88e-08!173;UBERON:0006601!2.88e-08!173;UBERON:0000955!1.29e-07!69;UBERON:0006238!1.29e-07!69;UBERON:0004121!1.64e-07!169;UBERON:0002780!6.64e-07!41;UBERON:0001890!6.64e-07!41;UBERON:0006240!6.64e-07!41 | |||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001016,4.53e-11,89;UBERON:0001017,2.31e-10,81;UBERON:0011216,4.91e-08,223;UBERON:0004121,7.67e-08,171;UBERON:0000924,7.67e-08,171;UBERON:0006601,7.67e-08,171;UBERON:0000955,8.65e-08,68;UBERON:0006238,8.65e-08,68;UBERON:0002780,6.64e-07,41;UBERON:0001890,6.64e-07,41;UBERON:0003080,6.64e-07,41;UBERON:0006240,6.64e-07,41 | |||
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| ||
|short_description=p1@PHF6 | |||
}} | }} |
Latest revision as of 12:37, 19 September 2015
Short description: | p1@PHF6 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_PHF6_5end |
Coexpression cluster: | C17_Mast_CD14_Monocytederived_Lymphatic_Smooth_mesenchymal_Macrophage |
Association with transcript: | 0bp_to_ENST00000332070, ENST00000370799, ENST00000394292, ENST00000416404, NM_001015877, NM_032335, NM_032458, uc004exh.2, uc004exi.2, uc004exj.2, uc004exk.2, uc010nrr.2, uc011mvk.1_5end |
EntrezGene: | PHF6 |
HGNC: | 18145 |
UniProt: | Q8IWS0Q5JRC6E9PC97B4E0G4A8K230 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
nervous system | 4.53e-11 | 89 |
central nervous system | 2.31e-10 | 81 |
organ system subdivision | 4.91e-08 | 223 |
ectoderm-derived structure | 7.67e-08 | 171 |
ectoderm | 7.67e-08 | 171 |
presumptive ectoderm | 7.67e-08 | 171 |
brain | 8.65e-08 | 68 |
future brain | 8.65e-08 | 68 |
regional part of forebrain | 6.64e-07 | 41 |
forebrain | 6.64e-07 | 41 |
anterior neural tube | 6.64e-07 | 41 |
future forebrain | 6.64e-07 | 41 |
Ontology term | p-value | n |
---|---|---|
cancer | 5.15e-34 | 235 |
disease of cellular proliferation | 1.58e-33 | 239 |
cell type cancer | 3.54e-23 | 143 |
carcinoma | 4.05e-18 | 106 |
organ system cancer | 7.57e-17 | 137 |
hematologic cancer | 2.39e-09 | 51 |
immune system cancer | 2.39e-09 | 51 |
leukemia | 1.03e-08 | 39 |
myeloid leukemia | 8.42e-08 | 31 |